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How to reorder a ragged column, e.g. metadata?

hyanwong asked May 26, 2024 in Q&A · Unanswered

3
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Adding new population in the unified genealogy

nbesteban asked Apr 30, 2024 in Q&A · Unanswered

11
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Understanding nodes with multiple parents

madeline-chase asked May 2, 2024 in Q&A · Unanswered

1
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Calculating number of extant lineages over time

JaneeshBansal asked Nov 27, 2023 in Q&A · Answered

9
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Collapse some coalescence into polytomies

hyanwong asked Jan 13, 2024 in Q&A · Closed · Unanswered

1
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Tree Sequences with Indels

reedacartwright asked Oct 9, 2021 in Q&A · Answered

19
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Extracting branch lengths from mutations

Schraiber asked Jan 26, 2024 in Q&A · Unanswered

6
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Understanding trait_linear_model

quattro asked Jan 18, 2024 in Q&A · Answered

3
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Remove flanking locally-unary regions

hyanwong asked Jan 13, 2024 in Q&A · Unanswered

1
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all nodes_time() - even duplicates

JaneeshBansal asked Dec 11, 2023 in Q&A · Unanswered

7
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Why Tree sequences generated from Relate (convert .mut/.anc) has no population labels

itsmestewart asked Oct 18, 2023 in Q&A · Closed · Answered

4
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Genealogical relatedness instead of genetic relatedness

fouerghi asked Aug 15, 2023 in Q&A · Closed · Unanswered

1
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How to find out if there is any metadata in a table

hyanwong asked Jul 22, 2023 in Q&A · Answered

3
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Question about how to use tsk_treeseq_genealogical_nearest_neighbours function of C API

T-Funayama asked Jul 8, 2023 in Q&A · Unanswered

5
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Find nodes which are coalescent anywhere

hyanwong asked Jul 5, 2023 in Q&A · Answered

7
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Get the edge ids for every mutation in a TS

hyanwong asked Apr 10, 2021 in Q&A · Answered

1
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Bootstrapping to estimate uncertainty in subpopulation pi

MeaghanClark asked Mar 24, 2023 in Q&A · Unanswered

5
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Creating a tree sequence object within a C API integrated program

mawassw asked Mar 21, 2023 in Q&A · Answered

10
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Finding span of a node across trees (and average arity)

hyanwong asked Mar 1, 2023 in Q&A · Answered

9
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Keeping track of sets of samples

PaulYannJay asked Feb 24, 2023 in Q&A · Unanswered

0
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Calculating inbreeding coefficients from pedigrees

JimmyPeniston asked Feb 19, 2023 in Q&A · Answered

17
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Simplify a tree sequence down so as to collapse clonal lineages

hyanwong asked Feb 24, 2021 in Q&A · Answered

27
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Function to return the common ancestor of a set of nodes

stsmall asked May 4, 2021 in Q&A · Answered

11
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Removing samples not involved in recombination

hyanwong asked Jan 28, 2023 in Q&A · Answered

5
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determining time of fixation of a fixed mutation

mawassw asked Dec 14, 2022 in Q&A · Unanswered

8