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Merge remote-tracking branch 'origin/develop' into develop #2054

Merge remote-tracking branch 'origin/develop' into develop

Merge remote-tracking branch 'origin/develop' into develop #2054

Workflow file for this run

name: Multi-software test
on:
pull_request:
push:
branches:
- master
- develop
jobs:
test:
name: Tests | python ${{ matrix.python-version }}, ${{ matrix.os }}, ${{ matrix.pandas }}, ${{ matrix.numpy }}
runs-on: ${{ matrix.os }}
strategy:
matrix:
os: [ ubuntu-22.04 ]
python-version: [ 3.8 ]
pandas: ["pandas>1.1"]
numpy: ["numpy"]
include:
- os: ubuntu-22.04
python-version: 3.7.16
pandas: "pandas>1.1"
numpy: "numpy"
- os: ubuntu-22.04
python-version: 3.8
pandas: "pandas>1.1"
numpy: "numpy"
- os: ubuntu-22.04
python-version: 3.9
pandas: "pandas>1.1"
numpy: "numpy"
- os: ubuntu-22.04
python-version: "3.10"
pandas: "pandas>1.1"
numpy: "numpy"
- os: ubuntu-22.04
python-version: "3.11"
pandas: "pandas>1.1"
numpy: "numpy"
- os: ubuntu-22.04
python-version: "3.12"
pandas: "pandas>1.1"
numpy: "numpy"
steps:
- uses: actions/checkout@v4
- name: Setup python
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
architecture: x64
- uses: actions/cache@v4
if: startsWith(runner.os, 'Linux')
with:
path: ~/.cache/pip
key: ${{ runner.os }}-${{ matrix.pandas }}-pip-${{ hashFiles('**/requirements.txt') }}
restore-keys: |
${{ runner.os }}-${{ matrix.pandas }}-pip-
- uses: actions/cache@v4
if: startsWith(runner.os, 'macOS')
with:
path: ~/Library/Caches/pip
key: ${{ runner.os }}-${{ matrix.pandas }}-pip-${{ hashFiles('**/requirements.txt') }}
restore-keys: |
${{ runner.os }}-${{ matrix.pandas }}-pip-
- uses: actions/cache@v4
if: startsWith(runner.os, 'Windows')
with:
path: ~\AppData\Local\pip\Cache
key: ${{ runner.os }}-${{ matrix.pandas }}-pip-${{ hashFiles('**/requirements.txt') }}
restore-keys: |
${{ runner.os }}-${{ matrix.pandas }}-pip-
- run: |
pip install --upgrade pip setuptools wheel
pip install -r requirements.txt "${{ matrix.pandas }}" "${{ matrix.numpy }}"
pip install -r requirements-test.txt
- run: make install
- run: make test
coverage:
name: Coverage | python ${{ matrix.python-version }}, ${{ matrix.os }}, ${{ matrix.pandas }}, ${{ matrix.numpy }}
runs-on: ${{ matrix.os }}
strategy:
matrix:
os: [ ubuntu-22.04 ]
python-version: [ 3.8 ]
pandas: [ "pandas>1.1"]
numpy: ["numpy"]
steps:
- uses: actions/checkout@v4
- name: Setup python
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
architecture: x64
- uses: actions/cache@v4
if: startsWith(runner.os, 'Linux')
with:
path: ~/.cache/pip
key: ${{ runner.os }}-${{ matrix.pandas }}-pip-${{ hashFiles('**/requirements.txt') }}
restore-keys: |
${{ runner.os }}-${{ matrix.pandas }}-pip-
- uses: actions/cache@v4
if: startsWith(runner.os, 'macOS')
with:
path: ~/Library/Caches/pip
key: ${{ runner.os }}-${{ matrix.pandas }}-pip-${{ hashFiles('**/requirements.txt') }}
restore-keys: |
${{ runner.os }}-${{ matrix.pandas }}-pip-
- uses: actions/cache@v4
if: startsWith(runner.os, 'Windows')
with:
path: ~\AppData\Local\pip\Cache
key: ${{ runner.os }}-${{ matrix.pandas }}-pip-${{ hashFiles('**/requirements.txt') }}
restore-keys: |
${{ runner.os }}-${{ matrix.pandas }}-pip-
- run: |
pip install --upgrade pip setuptools wheel
pip install -r requirements.txt "${{ matrix.pandas }}" "${{ matrix.numpy }}"
pip install -r requirements-test.txt
- run: make install
- run: make test_cov
- uses: actions/cache@v4
if: startsWith(runner.os, 'Windows')
with:
path: ~\AppData\Local\pip\Cache
key: ${{ runner.os }}-${{ matrix.pandas }}-pip-${{ hashFiles('**/requirements.txt') }}
restore-keys: |
${{ runner.os }}-${{ matrix.pandas }}-pip-
- run: |
pip install --upgrade pip setuptools wheel
pip install -r requirements.txt "${{ matrix.pandas }}" "${{ matrix.numpy }}"
pip install -r requirements-test.txt
- run: make install
- run: make test_cov
- run: codecov -F py${{ matrix.python-version }}-${{ matrix.os }}-${{ matrix.pandas }}-${{ matrix.numpy }}
test_spark:
runs-on: ${{ matrix.os }}
continue-on-error: True
strategy:
matrix:
os: [ ubuntu-22.04 ]
python-version: [3.7, 3.8]
pandas: ["pandas>1.1"]
spark: ["3.0.1"]
hadoop: [ 2.7 ]
numpy: ["numpy"]
java_home: [ /usr/lib/jvm/java-8-openjdk-amd64 ]
name: Tests Spark | python ${{ matrix.python-version }}, ${{ matrix.os }}, spark${{ matrix.spark }}, ${{ matrix.pandas }}, ${{ matrix.numpy }}
env:
JAVA_HOME: ${{ matrix.java_home }}
SPARK_VERSION: ${{ matrix.spark }}
HADOOP_VERSION: ${{ matrix.hadoop }}
SPARK_DIRECTORY: ${{ github.workspace }}/../
SPARK_HOME: ${{ github.workspace }}/../spark/
steps:
- uses: actions/checkout@v4
- name: Setup python
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
architecture: x64
- uses: actions/cache@v4
if: startsWith(runner.os, 'Linux')
with:
path: ~/.cache/pip
key: ${{ runner.os }}-${{ matrix.pandas }}-pip-${{ hashFiles('**/requirements.txt') }}
restore-keys: |
${{ runner.os }}-${{ matrix.pandas }}-pip-\
- uses: actions/cache@v4
if: startsWith(runner.os, 'macOS')
with:
path: ~/Library/Caches/pip
key: ${{ runner.os }}-${{ matrix.pandas }}-pip-${{ hashFiles('**/requirements.txt') }}
restore-keys: |
${{ runner.os }}-${{ matrix.pandas }}-pip-
- uses: actions/cache@v4
if: startsWith(runner.os, 'Windows')
with:
path: ~\AppData\Local\pip\Cache
key: ${{ runner.os }}-${{ matrix.pandas }}-pip-${{ hashFiles('**/requirements.txt') }}
restore-keys: |
${{ runner.os }}-${{ matrix.pandas }}-pip-
- run: |
pip install --upgrade pip setuptools wheel
pip install pytest-spark>=0.6.0 pyarrow==1.0.1 pyspark=="${{ matrix.spark }}"
pip install -r requirements.txt
pip install -r requirements-test.txt
pip install "${{ matrix.pandas }}" "${{ matrix.numpy }}"
- if: ${{ matrix.spark != '3.0.1' }}
run: echo "ARROW_PRE_0_15_IPC_FORMAT=1" >> $GITHUB_ENV
- run: echo "SPARK_LOCAL_IP=127.0.0.1" >> $GITHUB_ENV
- run: make install
- run: make install-spark-ci
- run: pip install -r requirements-spark.txt # Make sure the proper version of pandas is install after everything
- run: make test_spark