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Vivarium Collective

home of the vivarium core engine and project ecosystem

11 followers
https://vivarium-collective.github.io
vivarium.collective.contact@gmail.com

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vivarium-core vivarium-core Public

Core Interface and Engine for Vivarium

Python 20 2
bigraph-schema bigraph-schema Public

compositional type schemas

Python 1
process-bigraph process-bigraph Public

Jupyter Notebook 2
bigraph-viz bigraph-viz Public

visualization tool for bigraph schema

Jupyter Notebook

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Showing 10 of 34 repositories

biosimulator-processes Public
Core implementations of simulator processes using the process-bigraph Process API

Jupyter Notebook 0 Apache-2.0 1 0 1 Updated May 29, 2024
vivarium-collective.github.io Public

HTML 0 0 1 0 Updated May 28, 2024
process-bigraph Public

Jupyter Notebook 2 Apache-2.0 0 24 0 Updated May 26, 2024
bigraph-schema Public
compositional type schemas

Python 1 Apache-2.0 0 31 2 Updated May 24, 2024
hypoxia-oscillations Public

Jupyter Notebook 0 1 0 0 Updated May 24, 2024
vivarium-simservice Public

Python 0 MIT 0 0 0 Updated May 24, 2024
biosimulator-processes-api Public
REST API which interacts with the biosimulator-processes tooling.

Python 0 0 0 0 Updated May 17, 2024
vivarium-core Public
Core Interface and Engine for Vivarium

Python 20 Apache-2.0 2 16 (1 issue needs help) 0 Updated May 2, 2024
bigraph-viz Public
visualization tool for bigraph schema

Jupyter Notebook 0 Apache-2.0 0 0 1 Updated Mar 25, 2024
bigraph-builder Public

Jupyter Notebook 0 Apache-2.0 0 0 1 Updated Mar 16, 2024

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