awesome-image-tools

A community driven list of useful tools for marine image and video analysis.

Slack

To contact fellow scientists working on image and video analysis, you can join our community at https://marineimaging.slack.com/. Send a request to brian at mbari dot org for an invitation.

Table of Contents

• Projects
  • Identification
  • Image Annotation
  • Miscellaneous
  • Training Sets
  • Video Annotation

Identification

• Encyclopedia of Life
• MBARI Deep-Sea Guide
• Tree of Life
• World Register of Marine Species (WoRMS)

Image Annotation

Name	Free	Open Source	Notes
BenthoBox	✅	❌
BIIGLE	✅	✅	https://github.com/biigle/
Coral Point Count with Excel extensions	✅	❌
CoralNet	✅	❌
cvat	✅	✅
Deep Sea Spy	❌	❌
Labelbox	❌	❌
labelme	✅	✅
OFOP	❌	❌
RectLabel	❌	❌
SeaGIS	❌	❌	Includes EventMeasure and TransectMeasure
Sebastes	✅	✅
Squidle+	✅	✅	Source Code
Supervisely	❌	❌
Tator	✅	✅	See: Tutorials and Source Code
TagLab	✅	✅
VIAME	✅	✅	All Docs
VoTT	✅	✅
FishID	✅	🔜	Send an email to fishidglow@outlook.com to access and collaborate

Miscellaneous

Name	Free	Open Source	Notes
3D Metrics	❌	❌
Cthulhu	❌	❌	Video Player with Remote Control API that supports localizations
iNaturalist	✅	❌
Matisse	❌	❌
OpenCV	✅	✅
Sharktopoda	✅	✅	Video Player with Remote Control API. Supports creating and editing bounding boxes on video
Sharktopoda 1	✅	✅	Video Player with Remote Control API
FishIDTrackers	✅	✅	Fish detection and tracking pipelines with demo datasets

Training Sets

• FathomNet
• Fishnet.AI
• FishIDLowViz
• FishIDLuderick
• DeepFish
• VIAME

Video Annotation

Name	Free	Open Source	Notes
ADELIE	✅	❌
BIIGLE	✅	✅	https://github.com/biigle/
Digital Fisher	❌	❌
MBARI Media Managment (M3/VARS)	✅	✅	Quickstart
Scalabel	✅	✅
SeaTube	✅	❌
Tator	✅	✅	See: Tutorials and Source Code
Video Annotation and Reference System (VARS)	✅	✅
video-annotation-tool	✅	✅
VIAME	✅	✅	All Docs
FishID	✅	🔜	Send an email to fishidglow@outlook.com to access and collaborate