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Update scooby requirement from <0.10.0,>=0.5.1 to >=0.5.1,<0.11.0 #16957

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Update scooby requirement from <0.10.0,>=0.5.1 to >=0.5.1,<0.11.0

Update scooby requirement from <0.10.0,>=0.5.1 to >=0.5.1,<0.11.0 #16957

Workflow file for this run

.github/workflows/testing-and-deployment.yml at 28260d0
name: Unit Testing and Deployment
on:
pull_request:
workflow_dispatch:
schedule:
- cron: "0 4 * * *"
push:
tags:
- "*"
branches:
- main
concurrency:
group: ${{ github.workflow }}-${{ github.ref }}
cancel-in-progress: true
env:
ALLOW_PLOTTING: true
SHELLOPTS: "errexit:pipefail"
jobs:
macOS:
# https://github.com/pyvista/pyvista/pull/5960
runs-on: macos-12
name: Mac OS Unit Testing
strategy:
matrix:
python-version: ["3.9", "3.11"]
steps:
- uses: actions/checkout@v4
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
cache: "pip"
cache-dependency-path: |
requirements.txt
requirements_test.txt
- name: Install PyVista
run: pip install . --no-deps
- name: Install test dependencies
run: pip install vtk -r requirements_test.txt
- name: Report
run: python -c "import pyvista;print(pyvista.Report(gpu=False));from pyvista import examples;print('User data path:', examples.USER_DATA_PATH)"
- name: Test Core API
run: pytest -v --ignore=tests/plotting
- name: Test Plotting
run: pytest -v tests/plotting --fail_extra_image_cache
LinuxConda:
runs-on: ubuntu-20.04
if: false
env:
CONDA_ALWAYS_YES: 1
conda_env: pyvista-vtk
DISPLAY: ":99.0"
PYVISTA_OFF_SCREEN: True
steps:
- uses: actions/checkout@v4
- name: Set up headless display
uses: pyvista/setup-headless-display-action@v2
- name: Cache Conda Packages
uses: actions/cache@v4
with:
path: ~/anaconda3/pkgs
key: Conda-${{ runner.os }}-${{ hashFiles('environment.yml') }}
restore-keys: |
${{ runner.os }}-conda-
- uses: actions/cache@v4
with:
path: ~/.local/share/pyvista/examples
key: Examples-1-${{ hashFiles('*') }}
restore-keys: |
Examples-1-
# See: https://www.anaconda.com/blog/a-faster-conda-for-a-growing-community
- name: Install mamba
run: |
source /usr/share/miniconda/etc/profile.d/conda.sh
conda config --set channel_priority strict
conda update -n base conda
conda install -n base conda-libmamba-solver
- name: "Workaround for mamba-org/mamba#488"
run: rm /usr/share/miniconda/pkgs/cache/*.json
- name: Create Anaconda environment
run: |
source /usr/share/miniconda/etc/profile.d/conda.sh
conda config --add channels conda-forge
conda env create --quiet -n ${{ env.conda_env }} --file environment.yml --experimental-solver=libmamba
conda activate ${{ env.conda_env }}
conda list
- name: Install PyVista
run: |
source /usr/share/miniconda/etc/profile.d/conda.sh
conda activate ${{ env.conda_env }}
pip install -e .
which python
python -c "import pyvista; print(pyvista.Report(gpu=False))"
python -c "from pyvista import examples; print(examples.USER_DATA_PATH)"
- name: Test Core API
run: |
source /usr/share/miniconda/etc/profile.d/conda.sh
conda activate ${{ env.conda_env }}
pip install -r requirements_test.txt
pytest -v --ignore=tests/plotting
- name: Test Core Plotting
run: |
source /usr/share/miniconda/etc/profile.d/conda.sh
conda activate ${{ env.conda_env }}
pytest -v tests/plotting --cov-report html --fail_extra_image_cache
Linux:
name: Linux Unit Testing
runs-on: ubuntu-20.04
strategy:
fail-fast: false
# see discussion at https://github.com/pyvista/pyvista/issues/2867
matrix:
include:
- python-version: "3.8"
vtk-version: "9.0.3" # Requires numpy<1.24
numpy-version: "default"
- python-version: "3.9"
vtk-version: "9.1"
numpy-version: "default"
- python-version: "3.10"
vtk-version: "9.2.2"
numpy-version: "default"
- python-version: "3.11"
vtk-version: "9.2.6"
numpy-version: "default"
- python-version: "3.12"
vtk-version: "latest"
numpy-version: "default"
- python-version: "3.12"
vtk-version: "latest"
numpy-version: "pre"
steps:
- uses: actions/checkout@v4
with:
fetch-depth: 2
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
cache: "pip"
cache-dependency-path: |
requirements.txt
requirements_test.txt
- uses: actions/cache@v4
with:
path: ~/.local/share/pyvista/examples
key: Examples-1-${{ hashFiles('*') }}
restore-keys: |
Examples-1-
- name: Build wheel and install pyvista
run: |
pip install build
python -m build --wheel
pip install dist/pyvista*.whl
- name: Set up vtk
if: ${{ matrix.vtk-version != 'latest' }}
run: pip install vtk==${{ matrix.vtk-version }}
# Make sure PyVista does not break from non-core dependencies
- name: Software Report (Core Dependencies)
run: python -c "import pyvista; print(pyvista.Report());"
- name: Install Testing Requirements
run: pip install -r requirements_test.txt
- name: Limit NumPy for VTK 9.0.3
if: ${{ matrix.vtk-version == '9.0.3' }}
run: pip install 'numpy<1.24'
- name: Limit Matplotlib for VTK<9.2.2
if: ${{ matrix.vtk-version == '9.1' || matrix.vtk-version == '9.0.3' }}
run: pip install 'matplotlib<3.6'
- name: Install latest numpy 2.0 beta/rc
if: ${{ matrix.numpy-version == 'pre' }}
run: |
pip uninstall numpy matplotlib -y
pip install --pre --no-deps -i https://pypi.anaconda.org/scientific-python-nightly-wheels/simple matplotlib
pip install --pre --no-deps numpy
- name: Core Testing (no GL)
continue-on-error: ${{ matrix.numpy-version == 'pre' }}
run: python -m pytest --cov=pyvista -v tests/core tests/examples
- uses: awalsh128/cache-apt-pkgs-action@v1.1.3
with:
packages: libgl1-mesa-glx xvfb
version: 3.0
- name: Plotting Testing (uses GL)
continue-on-error: ${{ matrix.numpy-version == 'pre' }}
run: xvfb-run -a python -m pytest --cov=pyvista --cov-append --cov-report=xml --fail_extra_image_cache -v --ignore=tests/core --ignore=tests/examples
- name: Software Report
if: always()
run: |
xvfb-run -a python -c "import pyvista; print(pyvista.Report()); from pyvista import examples; print('User data path:', examples.USER_DATA_PATH)"
which python
pip list
- uses: codecov/codecov-action@v4
name: "Upload coverage to CodeCov"
env:
CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
- name: Check package
run: |
pip install build twine
python -m build
twine check --strict dist/*
- name: Upload to PyPi
if: matrix.python-version == '3.9' && startsWith(github.ref, 'refs/tags/v')
run: |
twine upload --skip-existing dist/pyvista*
env:
TWINE_USERNAME: __token__
TWINE_PASSWORD: ${{ secrets.PYPI_TOKEN }}
TWINE_REPOSITORY_URL: "https://upload.pypi.org/legacy/"
windows:
name: Windows Unit Testing
runs-on: windows-latest
env:
CI_WINDOWS: true
strategy:
fail-fast: false
matrix:
python-version: ["3.8", "3.9", "3.10", "3.11", "3.12"]
steps:
- uses: actions/checkout@v4
- name: Set up Python
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
cache: "pip"
cache-dependency-path: |
requirements.txt
requirements_test.txt
- name: Set up headless display
uses: pyvista/setup-headless-display-action@v2
- name: Install PyVista
run: pip install . --no-deps
- name: Install test dependencies
run: pip install vtk -r requirements_test.txt
- name: Report
run: python -c "import pyvista; print(pyvista.Report(gpu=False)); from pyvista import examples; print('User data path:', examples.USER_DATA_PATH)"
- name: Set example data path as env variable
run: |
chcp 65001 #set code page to utf-8
echo ("PYVISTA_EXAMPLE_DATA_PATH=" + $(python -c "import pyvista; from pyvista import examples; print(examples.USER_DATA_PATH)")) >> $env:GITHUB_ENV
- name: Cache example data
uses: actions/cache@v4
with:
path: ${{ env.PYVISTA_EXAMPLE_DATA_PATH }}
key: Examples-1-${{ hashFiles('*') }}
restore-keys: |
Examples-1-
- name: Test Core API
run: python -m pytest -v --ignore=tests/plotting
- name: Test Plotting
run: python -m pytest -v tests/plotting --fail_extra_image_cache