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Bump pytest from 7.4.4 to 8.1.1 in /backend #535

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@dependabot dependabot bot commented on behalf of github Mar 11, 2024

Bumps pytest from 7.4.4 to 8.1.1.

Release notes

Sourced from pytest's releases.

8.1.1

pytest 8.1.1 (2024-03-08)

::: {.note} ::: {.title} Note :::

This release is not a usual bug fix release -- it contains features and improvements, being a follow up to 8.1.0, which has been yanked from PyPI. :::

Features

  • #11475: Added the new consider_namespace_packages{.interpreted-text role="confval"} configuration option, defaulting to False.

    If set to True, pytest will attempt to identify modules that are part of namespace packages when importing modules.

  • #11653: Added the new verbosity_test_cases{.interpreted-text role="confval"} configuration option for fine-grained control of test execution verbosity. See Fine-grained verbosity <pytest.fine_grained_verbosity>{.interpreted-text role="ref"} for more details.

Improvements

  • #10865: pytest.warns{.interpreted-text role="func"} now validates that warnings.warn{.interpreted-text role="func"} was called with a [str]{.title-ref} or a [Warning]{.title-ref}. Currently in Python it is possible to use other types, however this causes an exception when warnings.filterwarnings{.interpreted-text role="func"} is used to filter those warnings (see [CPython #103577](python/cpython#103577) for a discussion). While this can be considered a bug in CPython, we decided to put guards in pytest as the error message produced without this check in place is confusing.

  • #11311: When using --override-ini for paths in invocations without a configuration file defined, the current working directory is used as the relative directory.

    Previoulsy this would raise an AssertionError{.interpreted-text role="class"}.

  • #11475: --import-mode=importlib <import-mode-importlib>{.interpreted-text role="ref"} now tries to import modules using the standard import mechanism (but still without changing :pysys.path{.interpreted-text role="data"}), falling back to importing modules directly only if that fails.

    This means that installed packages will be imported under their canonical name if possible first, for example app.core.models, instead of having the module name always be derived from their path (for example .env310.lib.site_packages.app.core.models).

  • #11801: Added the iter_parents() <_pytest.nodes.Node.iter_parents>{.interpreted-text role="func"} helper method on nodes. It is similar to listchain <_pytest.nodes.Node.listchain>{.interpreted-text role="func"}, but goes from bottom to top, and returns an iterator, not a list.

  • #11850: Added support for sys.last_exc{.interpreted-text role="data"} for post-mortem debugging on Python>=3.12.

  • #11962: In case no other suitable candidates for configuration file are found, a pyproject.toml (even without a [tool.pytest.ini_options] table) will be considered as the configuration file and define the rootdir.

  • #11978: Add --log-file-mode option to the logging plugin, enabling appending to log-files. This option accepts either "w" or "a" and defaults to "w".

    Previously, the mode was hard-coded to be "w" which truncates the file before logging.

... (truncated)

Commits
  • 81653ee Adjust changelog manually for 8.1.1
  • e60b4b9 Prepare release version 8.1.1
  • 15fbe57 [8.1.x] Revert legacy path removals (#12093)
  • 86c3aab [8.1.x] Do not import duplicated modules with --importmode=importlib (#12077)
  • 5b82b0c [8.1.x] Yank version 8.1.0 (#12076)
  • 0a53681 Merge pull request #12054 from pytest-dev/release-8.1.0
  • b9a167f Prepare release version 8.1.0
  • 00043f7 Merge pull request #12038 from bluetech/fixtures-rm-arg2index
  • f4e1025 Merge pull request #12048 from bluetech/fixture-teardown-excgroup
  • 43492f5 Merge pull request #12051 from jakkdl/test_debugging_pythonbreakpoint
  • Additional commits viewable in compare view

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Bumps [pytest](https://github.com/pytest-dev/pytest) from 7.4.4 to 8.1.1.
- [Release notes](https://github.com/pytest-dev/pytest/releases)
- [Changelog](https://github.com/pytest-dev/pytest/blob/main/CHANGELOG.rst)
- [Commits](pytest-dev/pytest@7.4.4...8.1.1)

---
updated-dependencies:
- dependency-name: pytest
  dependency-type: direct:development
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
@dependabot dependabot bot added dependencies Pull requests that update a dependency file python Pull requests that update Python code labels Mar 11, 2024
@dependabot dependabot bot requested a review from pozsa March 11, 2024 14:29
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codecov bot commented Mar 11, 2024

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 100.00%. Comparing base (de3ef77) to head (e7f850b).

Additional details and impacted files
@@            Coverage Diff            @@
##              main      #535   +/-   ##
=========================================
  Coverage   100.00%   100.00%           
=========================================
  Files            7         7           
  Lines          105       105           
=========================================
  Hits           105       105           
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Overview

Image reference psisharedsharedchncr001.azurecr.io/alphafold:edge psisharedsharedchncr001.azurecr.io/alphafold:pr-535
- digest 35cc0232bf90 edfa18f3ee70
- provenance de3ef77 e7f850b
- vulnerabilities critical: 0 high: 6 medium: 4 low: 0 unspecified: 2 critical: 0 high: 6 medium: 2 low: 0 unspecified: 1
- platform linux/amd64 linux/amd64
- size 59 MB 67 MB (+8.4 MB)
- packages 110 110
Base Image python:3.10-alpine
also known as:
3.10-alpine3.19
3.10.13-alpine
3.10.13-alpine3.19
python:3.10-alpine
also known as:
3.10-alpine3.19
3.10.13-alpine
3.10.13-alpine3.19
- vulnerabilities critical: 0 high: 1 medium: 4 low: 0 unspecified: 1 critical: 0 high: 1 medium: 2 low: 0
Environment Variables (4 changes)
  • ± 4 changed
  • 6 unchanged
 GPG_KEY=A035C8C19219BA821ECEA86B64E628F8D684696D
 LANG=C.UTF-8
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-PYTHON_GET_PIP_SHA256=7cfd4bdc4d475ea971f1c0710a5953bcc704d171f83c797b9529d9974502fcc6
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-PYTHON_GET_PIP_URL=https://github.com/pypa/get-pip/raw/049c52c665e8c5fd1751f942316e0a5c777d304f/public/get-pip.py
+PYTHON_GET_PIP_URL=https://github.com/pypa/get-pip/raw/dbf0c85f76fb6e1ab42aa672ffca6f0a675d9ee4/public/get-pip.py
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 PYTHON_VERSION=3.10.13
-RELEASE_ID=de3ef7709d4a18edecd940fd654063e7e3e5b6a6
+RELEASE_ID=e7f850b735ec7bdd7abde26f44b1bbad31397417
-VERSION=edge
+VERSION=pr-535
Labels (3 changes)
  • ± 3 changed
  • 5 unchanged
-org.opencontainers.image.created=2024-01-25T08:16:19.691Z
+org.opencontainers.image.created=2024-03-11T14:29:54.941Z
 org.opencontainers.image.description=
 org.opencontainers.image.licenses=GPL-3.0
-org.opencontainers.image.revision=de3ef7709d4a18edecd940fd654063e7e3e5b6a6
+org.opencontainers.image.revision=e7f850b735ec7bdd7abde26f44b1bbad31397417
 org.opencontainers.image.source=https://github.com/paulscherrerinstitute/alphafold-on-fire
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-org.opencontainers.image.version=edge
+org.opencontainers.image.version=pr-535
Packages and Vulnerabilities (7 package changes and 2 vulnerability changes)
  • ♾️ 7 packages changed
  • 103 packages unchanged
  • ✔️ 2 vulnerabilities removed
Changes for packages of type apk (6 changes)
Package Version
psisharedsharedchncr001.azurecr.io/alphafold:edge
Version
psisharedsharedchncr001.azurecr.io/alphafold:pr-535
♾️ .python-rundeps 20231209.013648 20240127.073042
♾️ libcrypto3 3.1.4-r2 3.1.4-r5
♾️ libssl3 3.1.4-r2 3.1.4-r5
♾️ openssl 3.1.4-r2 3.1.4-r5
critical: 0 high: 0 medium: 2 low: 0 unspecified: 1
Removed vulnerabilities (3):
  • medium : CVE--2023--6129
  • medium : CVE--2024--0727
  • unspecified : CVE--2023--6237
♾️ tzdata 2023c-r1 2023d-r0
♾️ zlib 1.3-r2 1.3.1-r0
Changes for packages of type pypi (1 changes)
Package Version
psisharedsharedchncr001.azurecr.io/alphafold:edge
Version
psisharedsharedchncr001.azurecr.io/alphafold:pr-535
♾️ pip 23.3.2 24.0

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