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Migrate CI to GH Actions #2964

Merged
merged 155 commits into from
Feb 10, 2021
Merged

Migrate CI to GH Actions #2964

merged 155 commits into from
Feb 10, 2021

Commits on Dec 28, 2020

  1. Add draft GHA-based CI for Linux

    @jaimergp
    jaimergp committed Dec 28, 2020
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  2. Fix events

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  3. Dup key

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  4. Fix path

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  5. Update env vars

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  6. More fixes

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  7. Fix env vars again

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  8. add doxygen

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  9. add sudo

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  10. Typo

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  11. upgrade CUDA

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  12. escape newlines

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  13. more backslashes

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  14. fix CUDA_APT

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  15. more env vars fixes

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  16. fix missing file

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  17. acumulate env_vars

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  18. build python wrappers only if requested

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  19. add pytest

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  20. use $GITHUB_ENV 

    https://docs.github.com/en/free-pro-team@latest/actions/reference/workflow-commands-for-github-actions#environment-files
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  21. use ${GITHUB_WORKSPACE}

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  22. Pin older gromacs

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  23. add windows

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  24. Provide default values for unbound vars

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  25. fixes

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  26. this is powershell not cmd

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  27. update envs

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  28. win fix

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  29. make windows use cmd

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  30. Change install prefix

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  31. fixes

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  32. better env files

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  33. Increase timeout threshold

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  34. set xcode to 10.x

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  35. specify action version

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  36. fix sdk in macos

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  37. split jobs a bit more

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  38. build wrappers even if tests failed for core

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  39. revert & resort build/test

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  40. fix run logic?

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  41. install envs in D:\

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  42. add more cudas

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  43. allow longer test times

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  44. sudo that

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  45. fix cuda ver checks

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  46. another little fix

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  47. one more

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  48. missing package

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  49. missing dev packages

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  50. missing backslash

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  51. add nvprof

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  52. factor scripts out

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  53. export CUDA_PATH

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  54. no quotes in env var

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  55. add more cudas

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  56. fix ci name

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  57. fix flags

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  58. typo

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  59. missing parenthesis

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  60. add cuda 11.2 urls

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  61. add retry loops for online installations

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  62. add library existence tests

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  63. verbose

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  64. fix sets

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  65. CPU and PME are not built in GPU variants; do not test for those

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  66. quote?

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  67. fix windows checks

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  68. add macos opencl

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  69. disable opencl tests on macos (but build anyway)

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  70. add docs

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  71. cd into build for docs!

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  72. install then cd

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  73. pin sphinxcontrib-bibtex

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  74. we need tex in the system

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  75. split docs into a separate job

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  76. simplify retrying

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  77. simplify retrying 2

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  78. do install

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  79. fix tlmgr installation

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  80. more tex packages

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  81. one more

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  82. one more

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  83. add textcomp to docs

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  84. usepackage[utf8]{inputenc}

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  85. switch to xelatex?

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  86. add xetex

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  87. more fonts

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  88. do not use xindy

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  89. tables can't contain blocks and use tabularcolumns at the same time 

    https://www.sphinx-doc.org/en/master/usage/restructuredtext/directives.html?highlight=tabular#directive-tabularcolumns
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  90. build libs in docs too

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  91. update docs deps; bring in pdfs

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  92. kill server after 404 checks

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  93. chage 404 checker

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  94. explicit locations needed

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  95. cumulative exit codes

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  96. override set -e

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  97. update README badges

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  98. add ppc / arm

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  99. missing vbar

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  100. not it

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  101. one too many extensions

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  102. do not test gromacs

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  103. manage workspace

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  104. source conda.sh

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  105. add python version to matrix vars

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  106. source first thing

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  107. disable unbound checks

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  108. add compilers

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  109. some more cuda stuff

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  110. add CPU only ppc64le

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  111. link through stubs

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  112. One more way to obtain HOST_USER_ID?

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  113. let cmake find cf's opencl

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  114. Try with GCC7

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  115. add timeouts for docker based runs

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  116. add several attempts for stochastic failures

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  117. add tests with conda forge compilers

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  118. do not parallelize pytest in docker runs

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  119. exclude some known slow tests

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  120. enable ccache

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  121. forgot conda shell

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    jaimergp committed Dec 28, 2020
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  122. No need for macos sdk retries

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    jaimergp committed Dec 28, 2020
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  123. \ -> ^

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    jaimergp committed Dec 28, 2020
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  124. fix timestampt windows

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    jaimergp committed Dec 28, 2020
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  125. export env vars for current step too

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    jaimergp committed Dec 28, 2020
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  126. unneeded quotes windows?

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    jaimergp committed Dec 28, 2020
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  127. disable compression on windows?

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    jaimergp committed Dec 28, 2020
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  128. add ccache in docker too

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    jaimergp committed Dec 28, 2020
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  129. group commands

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    jaimergp committed Dec 28, 2020
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  130. fix syntax error

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    jaimergp committed Dec 28, 2020
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  131. fix version spec

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    jaimergp committed Dec 28, 2020
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  132. Increase timeout in Docker runs

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    jaimergp committed Dec 28, 2020
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  133. heh, it's double colon

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    jaimergp committed Dec 28, 2020
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  134. fix cache timestamp in windows

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    jaimergp committed Dec 28, 2020
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  135. escape % with %%

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    jaimergp committed Dec 28, 2020
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  136. ccache in docs too

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    jaimergp committed Dec 28, 2020
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  137. don't use wrapper package in windows; call vcvarsall directly

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    jaimergp committed Dec 28, 2020
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  138. More docker variants

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    jaimergp committed Dec 28, 2020
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  139. Handle ccache env vars in yaml

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    jaimergp committed Dec 28, 2020
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  140. Re-enable parallel pytest in Docker runs

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    jaimergp committed Dec 28, 2020
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  141. Delete unwanted azure ymls that I didn't end up using

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    jaimergp committed Dec 28, 2020
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Commits on Dec 29, 2020

  1. add some comments

    @jaimergp
    jaimergp committed Dec 29, 2020
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  2. Update badge URL

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    jaimergp committed Dec 29, 2020
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  3. is that path messing with windows ccache?

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    jaimergp committed Dec 29, 2020
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Commits on Dec 30, 2020

  1. add CI-README

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    jaimergp committed Dec 30, 2020
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Commits on Jan 15, 2021

  1. Reduce CI matrix

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    jaimergp committed Jan 15, 2021
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Commits on Jan 16, 2021

  1. increase timeouts

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    jaimergp committed Jan 16, 2021
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Commits on Jan 26, 2021

  1. Add GCC7 on PPC QEmu again (temporarily, just for debugging)

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    jaimergp committed Jan 26, 2021
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  2. add docker instructions for local debugging

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    jaimergp committed Jan 26, 2021
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  3. fix start_docker_locally

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    jaimergp committed Jan 26, 2021
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Commits on Jan 28, 2021

  1. Merge branch 'master' into gh-actions

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    jaimergp committed Jan 28, 2021
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  2. Merge remote-tracking branch 'upstream/master' into gh-actions

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    jaimergp committed Jan 28, 2021
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Commits on Feb 1, 2021

  1. skip some url checks in docs

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    jaimergp committed Feb 1, 2021
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Commits on Feb 2, 2021

  1. Use new package name

    @jaimergp
    jaimergp committed Feb 2, 2021
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  2. update link

    @jaimergp
    jaimergp committed Feb 2, 2021
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