change CI to include uv installation #593
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| name: testing | |
| on: | |
| push: | |
| branches: | |
| - main | |
| pull_request: | |
| branches: | |
| - main | |
| jobs: | |
| lint: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python 3.11 | |
| uses: actions/setup-python@v4.3.0 | |
| with: | |
| python-version: "3.11" | |
| cache: "pip" | |
| cache-dependency-path: "pyproject.toml" | |
| - name: Install dependencies | |
| run: | | |
| pip install --upgrade pip | |
| pip install uv | |
| uv venv | |
| python --version | |
| uv pip install --upgrade ruff mypy | |
| - name: ruff | |
| run: | | |
| ruff --version | |
| ruff check | |
| - name: mypy | |
| run: | | |
| mypy --version | |
| rm -rf .mypy_cache | |
| mypy src/rxn_network | |
| test: | |
| strategy: | |
| max-parallel: 6 | |
| matrix: | |
| os: [ubuntu-latest] | |
| python_version: ["3.9", "3.10", "3.11"] | |
| runs-on: ${{ matrix.os }} | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python_version }} | |
| uses: actions/setup-python@v4.3.0 | |
| with: | |
| python-version: ${{ matrix.python_version }} | |
| cache: "pip" | |
| cache-dependency-path: "pyproject.toml" | |
| - name: Install python dependencies | |
| run: | | |
| pip install --upgrade pip | |
| pip install uv | |
| uv pip install -e .[strict,tests] | |
| - name: Test with pytest | |
| env: | |
| MP_API_KEY: ${{ secrets.MP_API_KEY }} | |
| run: | | |
| pytest --cov=src/rxn_network --cov-report=xml | |
| - uses: codecov/codecov-action@v3.1.1 | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| file: ./coverage.xml | |
| docs: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Install pandoc | |
| run: sudo apt-get install pandoc | |
| - name: Set up Python 3.11 | |
| uses: actions/setup-python@v4.3.0 | |
| with: | |
| python-version: "3.11" | |
| cache: "pip" | |
| cache-dependency-path: "pyproject.toml" | |
| - name: Install python dependencies | |
| run: | | |
| pip install --upgrade pip | |
| pip install uv | |
| uv pip install -e .[strict,docs] | |
| - name: Build | |
| run: sphinx-build docs docs_build |