LACDR-DDS - Beltman lab
Popular repositories
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basic-programming-in-drug-discovery
basic-programming-in-drug-discovery PublicCourse materials for basic programming in drug discovery
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ClonalGrowthSimulator_SSA
ClonalGrowthSimulator_SSA PublicGillespie simulator of clonal growth
C++ 1
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ClonalGrowthSimulator_ABM
ClonalGrowthSimulator_ABM PublicAgent based simulator of clonal growth
C++
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Repositories
- Leegwater_lipidomics_normalization Public
Code and example dataset to generate figures for "Normalization strategies for lipidome data in cell line panels" (Leegwater et al. submitted)
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- beltman-DRAGbarcode-cleanup Public
- heldring-E2S-modeling Public
Data and code used for the manuscript titled "Interdependency of estradiol-mediated ERα activation and subsequent PR and GREB1 induction to control cell cycle progression"
- lems-emt-pdl1-models-figures Public
Model plus code to generate figures for Lems et al. 2023. Tumor-Mediated Immunosuppression and Cytokine Spreading Affects the Relation Between EMT and PD-L1 Status. doi: 10.3389/fimmu.2023.1219669
- LAG_TIM_BIOMARKERS Public
- H5CellProfiler Public
H5CellProfiler: User-friendly high-content CellProfiler imaging data analysis in R
- burger-emt-pdl1-models-figures Public
Models and code to generate figures for Burger et al. 2022. Bidirectional Crosstalk Between Epithelial-Mesenchymal Plasticity and IFNγ-Induced PD-L1 Expression Promotes Tumor Progression. bioRxiv. https://doi.org/10.1101/2022.02.03.478950
- heldring-spatial-liver-model Public
Models, code and data to reproduce the results from the spatial liver model manuscript.
- heldring_phh_code Public
Models and code to reproduce data analysis, simulations, parameter optimization and to generate figures.
