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Integrated Omics for MEtabolomics and Genomics Annotation

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https://www.esciencecenter.nl/project/integrated-omics-analysis-for-small-molecule-mediated-host-microbiome-inter

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paired-data-form paired-data-form Public

Linking mas spectra and genomic information to discover new chemistry

TypeScript 4 3

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Showing 10 of 20 repositories

ms2query Public
MS2Query - machine learning assisted library querying of MS/MS spectra

Python 34 Apache-2.0 8 16 4 Updated Apr 25, 2024
spec2vec Public
Word2Vec based similarity measure of mass spectrometry data.

Python 57 Apache-2.0 14 10 4 Updated Aug 10, 2023
ms2ldaviewer Public
Browser only based viewer for ms2lda results

Vue 0 Apache-2.0 0 0 7 Updated May 7, 2023
zenodo-upload Public
JS package to create a new version of a Zenodo upload with a file

TypeScript 1 Apache-2.0 2 4 8 Updated Jan 7, 2023
paired-data-form Public
Linking mas spectra and genomic information to discover new chemistry

TypeScript 4 Apache-2.0 3 2 0 Updated Jul 7, 2022
ms2query-app Public
Web App to match and analyse large MS/MS datasets

0 Apache-2.0 0 0 0 Updated May 8, 2022
mass-spectral-embeddings-visualization Public

Jupyter Notebook 1 1 0 0 Updated Nov 19, 2021
spec2vec_gnps_data_analysis Public
Analysis and benchmarking of mass spectra similarity measures using gnps data set.

Jupyter Notebook 21 Apache-2.0 11 2 0 Updated Aug 13, 2021
improve_library_matching Public Forked from louwenjjr/improve_library_matching
Apply machine-learning to improve mass spectra based library matching

Jupyter Notebook 0 3 0 0 Updated Nov 27, 2020
spec2vec_gcms_data_analysis Public Forked from efrain2010/spec2vec_gcms_data_analysis
Notebook for the analysis of spectra in GCMS samples

Jupyter Notebook 1 3 0 0 Updated Oct 5, 2020

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