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361 Open 760 Closed
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Issues list

New errors when running datasets_download_genome 16.6.0+galaxy0
#6056 opened Jun 5, 2024 by jennaj
Test release 24.1
#6051 opened Jun 4, 2024 by mvdbeek
4
Update DIMet
#6039 opened May 29, 2024 by bdartigues
Anndata new features add
#6025 opened May 23, 2024 by pavanvidem
2
Enhancement: allow BiG-SCAPE to process inputs without a required .gbk extension in dataset filename
#6015 opened May 17, 2024 by jennaj
Update antiSMASH to version 7.1.0.1
#6010 opened May 17, 2024 by SPBorkar04
1
revoluzer suite: Add format description to help
#6008 opened May 14, 2024 by bernt-matthias
@bernt-matthias
BMGE tool would be helpful on the public server tool request
#5998 opened May 7, 2024 by jaredbernard
2
Enhancement: Adjust how intervene_pairwise interprets input file names to print samples names in graphics
#5997 opened May 7, 2024 by jennaj
Splan: correct how wrapper parses the ykl parameter
#5989 opened May 3, 2024 by jennaj
RNA-Star correction: outWigType
#5987 opened May 3, 2024 by jennaj
DIMet: update tool description and parameters
#5984 opened May 3, 2024 by bdartigues
Minimap2 option
#5978 opened Apr 29, 2024 by aabaricalla
1
Adding a new sub-tool (RepeatModeler: generateSeedAlignments) tool request
#5950 opened Apr 15, 2024 by s-travers
source manifest seems to be mandatory for data_manager_ncbi_fcs_gx_database_downloader
#5925 opened Apr 1, 2024 by microfuge
1
integrate actc tool request
#5790 opened Feb 24, 2024 by bgruening
11
Improve/Fix slices in Table Compute
#5783 opened Feb 20, 2024 by paulzierep
Add ARIBA tool request
#5754 opened Feb 7, 2024 by FJavbMx
Cactus: use a collection for input
#5752 opened Feb 5, 2024 by TomHarrop
Roary: adjust the command line to prevent intermediate file deletion?
#5751 opened Feb 5, 2024 by jennaj
1
Bracken data manager requires labels and help documentation
#5745 opened Feb 2, 2024 by mvdbeek
13
Update request for Kodoja database search (version 0.0.8)
#5744 opened Feb 2, 2024 by jennaj
raxml output missing when classifying environmental sequences
#5734 opened Jan 25, 2024 by rvosa
Infer collection element naming with default_identifier_source
#5729 opened Jan 23, 2024 by neoformit
6
Output RData and RScript logs for Bioconductor tools that fail
#5725 opened Jan 19, 2024 by jennaj
ProTip! What’s not been updated in a month: updated:<2024-05-05.