I work with protein evolution and microbial ecology. Nowadays using mostly R/tidyverse, I have a long history in computing involving several tools.
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Linnaeus University & Stockholm University
- Stockholm
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taxdata2taxflat
taxdata2taxflat PublicConverts an NCBI taxonomy dump ("taxdata") to a flat tsv file with columns for recognized ranks.
Ruby
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pfitmap-nextflow
pfitmap-nextflow PublicNextflow pipeline for hierarchical protein classification
Nextflow
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