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chore(deps): bump pymongo from 4.6.2 to 4.6.3 #7326

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chore(deps): bump pymongo from 4.6.2 to 4.6.3

chore(deps): bump pymongo from 4.6.2 to 4.6.3 #7326

Workflow file for this run

.github/workflows/ci.yml at 1f787c9
name: CI
on:
workflow_call:
inputs:
config-path:
type: string
secrets:
JINA_AUTH_TOKEN:
required: false
pull_request:
types: [opened, synchronize, reopened]
jobs:
lint-ruff:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v2.5.0
- name: Set up Python 3.8
uses: actions/setup-python@v4
with:
python-version: 3.8
- name: Lint with ruff
run: |
python -m pip install --upgrade pip
python -m pip install poetry
poetry install
# stop the build if there are Python syntax errors or undefined names
poetry run ruff docarray
# exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
poetry run ruff docarray
check-black:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v2.5.0
- name: Set up Python 3.8
uses: actions/setup-python@v4
with:
python-version: 3.8
- name: check black
run: |
python -m pip install --upgrade pip
python -m pip install poetry
poetry install --only dev
poetry run black --check .
env:
CHANGED_FILES: ${{ steps.file_changes.outputs.added_modified }}
import-test:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v2.5.0
- name: Set up Python 3.8
uses: actions/setup-python@v4
with:
python-version: 3.8
- name: Prepare environment
run: |
python -m pip install --upgrade pip
python -m pip install poetry
poetry install --without dev
poetry run pip install tensorflow==2.12.0
poetry run pip install jax
poetry run pip uninstall -y torch
poetry run pip install torch
- name: Test basic import
run: poetry run python -c 'from docarray import DocList, BaseDoc'
# it is time to say bye bye to mypy because of the way we handle support of pydantic v1 and v2
# check-mypy:
# runs-on: ubuntu-latest
# steps:
# - uses: actions/checkout@v2.5.0
# - name: Set up Python 3.8
# uses: actions/setup-python@v4
# with:
# python-version: 3.8
# - name: check mypy
# run: |
# python -m pip install --upgrade pip
# python -m pip install poetry
# poetry install --all-extras
# poetry run mypy docarray
docarray-test:
needs: [import-test]
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
python-version: [3.9]
pydantic-version: ["pydantic-v2", "pydantic-v1"]
test-path: [tests/integrations, tests/units, tests/documentation]
steps:
- uses: actions/checkout@v2.5.0
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Prepare environment
run: |
python -m pip install --upgrade pip
python -m pip install poetry
poetry install --all-extras
poetry run pip install elasticsearch==8.6.2
./scripts/install_pydantic_v2.sh ${{ matrix.pydantic-version }}
poetry run pip uninstall -y torch
poetry run pip install torch
poetry run pip install numpy==1.26.1
sudo apt-get update
sudo apt-get install --no-install-recommends ffmpeg
- name: Test
id: test
run: |
poetry run pytest -m "not (tensorflow or benchmark or index or jax)" --cov=docarray --cov-report=xml ${{ matrix.test-path }} --ignore=tests/integrations/store/test_jac.py
echo "flag it as docarray for codeoverage"
echo "codecov_flag=docarray" >> $GITHUB_OUTPUT
timeout-minutes: 30
env:
JINA_AUTH_TOKEN: "${{ secrets.JINA_AUTH_TOKEN }}"
- name: Check codecov file
id: check_files
uses: andstor/file-existence-action@v1
with:
files: "coverage.xml"
- name: Upload coverage from test to Codecov
uses: codecov/codecov-action@v3.1.1
if: steps.check_files.outputs.files_exists == 'true' && ${{ matrix.python-version }} == '3.8'
with:
file: coverage.xml
name: benchmark-test-codecov
flags: ${{ steps.test.outputs.codecov_flag }}
fail_ci_if_error: false
docarray-test-proto3:
needs: [import-test]
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
python-version: [3.8]
pydantic-version: ["pydantic-v2", "pydantic-v1"]
steps:
- uses: actions/checkout@v2.5.0
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Prepare environment
run: |
python -m pip install --upgrade pip
python -m pip install poetry
poetry install --all-extras
./scripts/install_pydantic_v2.sh ${{ matrix.pydantic-version }}
poetry run pip install protobuf==3.20.0 # we check that we support 3.19
poetry run pip uninstall -y torch
poetry run pip install torch
sudo apt-get update
sudo apt-get install --no-install-recommends ffmpeg
- name: Test
id: test
run: |
poetry run pytest -m 'proto' --cov=docarray --cov-report=xml tests
echo "flag it as docarray for codeoverage"
echo "codecov_flag=docarray" >> $GITHUB_OUTPUT
timeout-minutes: 30
- name: Check codecov file
id: check_files
uses: andstor/file-existence-action@v1
with:
files: "coverage.xml"
- name: Upload coverage from test to Codecov
uses: codecov/codecov-action@v3.1.1
if: steps.check_files.outputs.files_exists == 'true' && ${{ matrix.python-version }} == '3.8'
with:
file: coverage.xml
name: benchmark-test-codecov
flags: ${{ steps.test.outputs.codecov_flag }}
fail_ci_if_error: false
docarray-doc-index:
needs: [import-test]
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
python-version: [3.8]
db_test_folder: [base_classes, elastic, epsilla, hnswlib, qdrant, weaviate, redis, milvus]
pydantic-version: ["pydantic-v2", "pydantic-v1"]
steps:
- uses: actions/checkout@v2.5.0
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Prepare environment
run: |
python -m pip install --upgrade pip
python -m pip install poetry
poetry install --all-extras
./scripts/install_pydantic_v2.sh ${{ matrix.pydantic-version }}
poetry run pip install protobuf==3.20.0
poetry run pip install tensorflow==2.12.0
poetry run pip uninstall -y torch
poetry run pip install torch
sudo apt-get update
sudo apt-get install --no-install-recommends ffmpeg
- name: Test
id: test
run: |
poetry run pytest -m 'index and not elasticv8' --cov=docarray --cov-report=xml tests/index/${{ matrix.db_test_folder }}
echo "flag it as docarray for codeoverage"
echo "codecov_flag=docarray" >> $GITHUB_OUTPUT
timeout-minutes: 30
- name: Check codecov file
id: check_files
uses: andstor/file-existence-action@v1
with:
files: "coverage.xml"
- name: Upload coverage from test to Codecov
uses: codecov/codecov-action@v3.1.1
if: steps.check_files.outputs.files_exists == 'true' && ${{ matrix.python-version }} == '3.8'
with:
file: coverage.xml
name: benchmark-test-codecov
flags: ${{ steps.test.outputs.codecov_flag }}
fail_ci_if_error: false
docarray-elastic-v8:
needs: [import-test]
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
python-version: [3.8]
pydantic-version: ["pydantic-v2", "pydantic-v1"]
steps:
- uses: actions/checkout@v2.5.0
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Prepare environment
run: |
python -m pip install --upgrade pip
python -m pip install poetry
poetry install --all-extras
./scripts/install_pydantic_v2.sh ${{ matrix.pydantic-version }}
poetry run pip install protobuf==3.20.0
poetry run pip install tensorflow==2.12.0
poetry run pip install elasticsearch==8.6.2
poetry run pip uninstall -y torch
poetry run pip install torch
sudo apt-get update
sudo apt-get install --no-install-recommends ffmpeg
- name: Test
id: test
run: |
poetry run pytest -m 'index and elasticv8' --cov=docarray --cov-report=xml tests
echo "flag it as docarray for codeoverage"
echo "codecov_flag=docarray" >> $GITHUB_OUTPUT
timeout-minutes: 30
- name: Check codecov file
id: check_files
uses: andstor/file-existence-action@v1
with:
files: "coverage.xml"
- name: Upload coverage from test to Codecov
uses: codecov/codecov-action@v3.1.1
if: steps.check_files.outputs.files_exists == 'true' && ${{ matrix.python-version }} == '3.8'
with:
file: coverage.xml
name: benchmark-test-codecov
flags: ${{ steps.test.outputs.codecov_flag }}
fail_ci_if_error: false
docarray-test-tensorflow:
needs: [import-test]
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
python-version: [3.8]
pydantic-version: ["pydantic-v2", "pydantic-v1"]
steps:
- uses: actions/checkout@v2.5.0
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Prepare environment
run: |
python -m pip install --upgrade pip
python -m pip install poetry
poetry install --all-extras
./scripts/install_pydantic_v2.sh ${{ matrix.pydantic-version }}
poetry run pip install protobuf==3.20.0
poetry run pip install google-auth==2.23.0
poetry run pip install tensorflow==2.12.0
poetry run pip uninstall -y torch
poetry run pip install torch
sudo apt-get update
sudo apt-get install --no-install-recommends ffmpeg
- name: Test
id: test
run: |
poetry run pytest -m 'tensorflow' --cov=docarray --cov-report=xml tests
echo "flag it as docarray for codeoverage"
echo "codecov_flag=docarray" >> $GITHUB_OUTPUT
timeout-minutes: 30
- name: Check codecov file
id: check_files
uses: andstor/file-existence-action@v1
with:
files: "coverage.xml"
- name: Upload coverage from test to Codecov
uses: codecov/codecov-action@v3.1.1
if: steps.check_files.outputs.files_exists == 'true' && ${{ matrix.python-version }} == '3.8'
with:
file: coverage.xml
name: benchmark-test-codecov
flags: ${{ steps.test.outputs.codecov_flag }}
fail_ci_if_error: false
docarray-test-jax:
needs: [import-test]
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
python-version: [3.8]
pydantic-version: ["pydantic-v2", "pydantic-v1"]
steps:
- uses: actions/checkout@v2.5.0
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Prepare environment
run: |
python -m pip install --upgrade pip
python -m pip install poetry
poetry install --all-extras
./scripts/install_pydantic_v2.sh ${{ matrix.pydantic-version }}
poetry run pip uninstall -y torch
poetry run pip install torch
poetry run pip install jaxlib
poetry run pip install jax
- name: Test
id: test
run: |
poetry run pytest -m 'jax' --cov=docarray --cov-report=xml tests
echo "flag it as docarray for codeoverage"
echo "codecov_flag=docarray" >> $GITHUB_OUTPUT
timeout-minutes: 30
- name: Check codecov file
id: check_files
uses: andstor/file-existence-action@v1
with:
files: "coverage.xml"
- name: Upload coverage from test to Codecov
uses: codecov/codecov-action@v3.1.1
if: steps.check_files.outputs.files_exists == 'true' && ${{ matrix.python-version }} == '3.8'
with:
file: coverage.xml
name: benchmark-test-codecov
flags: ${{ steps.test.outputs.codecov_flag }}
fail_ci_if_error: false
docarray-test-benchmarks:
needs: [import-test]
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
python-version: [3.8]
steps:
- uses: actions/checkout@v2.5.0
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Prepare environment
run: |
python -m pip install --upgrade pip
python -m pip install poetry
poetry install --all-extras
poetry run pip uninstall -y torch
poetry run pip install torch
- name: Test
id: test
run: |
poetry run pytest -m 'benchmark' --cov=docarray --cov-report=xml tests
echo "flag it as docarray for codeoverage"
echo "codecov_flag=docarray" >> $GITHUB_OUTPUT
timeout-minutes: 30
- name: Check codecov file
id: check_files
uses: andstor/file-existence-action@v1
with:
files: "coverage.xml"
- name: Upload coverage from test to Codecov
uses: codecov/codecov-action@v3.1.1
if: steps.check_files.outputs.files_exists == 'true' && ${{ matrix.python-version }} == '3.8'
with:
file: coverage.xml
name: benchmark-test-codecov
flags: ${{ steps.test.outputs.codecov_flag }}
fail_ci_if_error: false
# just for blocking the merge until all parallel tests are successful
success-all-test:
needs: [docarray-test, docarray-test-proto3, docarray-doc-index, docarray-elastic-v8, docarray-test-tensorflow, docarray-test-benchmarks, import-test, check-black, lint-ruff]
if: always()
runs-on: ubuntu-latest
steps:
- uses: technote-space/workflow-conclusion-action@v2
- name: Check Failure
if: env.WORKFLOW_CONCLUSION == 'failure'
run: exit 1
- name: Success
if: ${{ success() }}
run: echo "All Done"