Merge branch 'master' into fix/4107

* master: Add initial cupy tests (pydata#4214) Add 0.16.0 release summary New whatsnew section Release v0.16.0 Minor reorg of whatsnew for 0.16.0 (pydata#4216) fix sphinx warnings (pydata#4199) pin isort (pydata#4206) get the colorbar label via public methods (pydata#4201) Bump minimum versions for 0.16 release (pydata#4175) Allow passing axis kwargs to plot (pydata#4020) Fix to_unstacked_dataset for single dimension variables. (pydata#4094) Improve the speed of from_dataframe with a MultiIndex (by 40x!) (pydata#4184) More pint compatibility: silence UnitStrippedWarnings (pydata#4163) Fix typo (pydata#4192) use the latest image of RTD (pydata#4191)
dcherian · Jul 14, 2020 · 2b39154 · 2b39154
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diff --git a/asv_bench/benchmarks/pandas.py b/asv_bench/benchmarks/pandas.py
@@ -0,0 +1,24 @@
+import numpy as np
+import pandas as pd
+
+from . import parameterized
+
+
+class MultiIndexSeries:
+    def setup(self, dtype, subset):
+        data = np.random.rand(100000).astype(dtype)
+        index = pd.MultiIndex.from_product(
+            [
+                list("abcdefhijk"),
+                list("abcdefhijk"),
+                pd.date_range(start="2000-01-01", periods=1000, freq="B"),
+            ]
+        )
+        series = pd.Series(data, index)
+        if subset:
+            series = series[::3]
+        self.series = series
+
+    @parameterized(["dtype", "subset"], ([int, float], [True, False]))
+    def time_to_xarray(self, dtype, subset):
+        self.series.to_xarray()
diff --git a/ci/requirements/py36-min-all-deps.yml b/ci/requirements/py36-min-all-deps.yml
@@ -15,22 +15,21 @@ dependencies:
   - cfgrib=0.9
   - cftime=1.0
   - coveralls
-  - dask=2.5
-  - distributed=2.5
+  - dask=2.9
+  - distributed=2.9
   - flake8
   - h5netcdf=0.7
   - h5py=2.9  # Policy allows for 2.10, but it's a conflict-fest
   - hdf5=1.10
   - hypothesis
   - iris=2.2
-  - isort
+  - isort=4.3.21
   - lxml=4.4  # Optional dep of pydap
   - matplotlib=3.1
-  - msgpack-python=0.6  # remove once distributed is bumped. distributed GH3491
   - mypy=0.761  # Must match .pre-commit-config.yaml
   - nc-time-axis=1.2
   - netcdf4=1.4
-  - numba=0.44
+  - numba=0.46
   - numpy=1.15
   - pandas=0.25
   # - pint  # See py36-min-nep18.yml

diff --git a/ci/requirements/py36-min-nep18.yml b/ci/requirements/py36-min-nep18.yml
@@ -6,17 +6,15 @@ dependencies:
   # require drastically newer packages than everything else
   - python=3.6
   - coveralls
-  - dask=2.5
-  - distributed=2.5
-  - msgpack-python=0.6  # remove once distributed is bumped. distributed GH3491
+  - dask=2.9
+  - distributed=2.9
   - numpy=1.17
   - pandas=0.25
+  - pint=0.13
   - pip
   - pytest
   - pytest-cov
   - pytest-env
   - scipy=1.2
   - setuptools=41.2
   - sparse=0.8
-  - pip:
-      - pint==0.13
diff --git a/ci/requirements/py36.yml b/ci/requirements/py36.yml
@@ -19,7 +19,7 @@ dependencies:
   - hdf5
   - hypothesis
   - iris
-  - isort
+  - isort=4.3.21
   - lxml    # Optional dep of pydap
   - matplotlib
   - mypy=0.761  # Must match .pre-commit-config.yaml
@@ -28,6 +28,7 @@ dependencies:
   - numba
   - numpy
   - pandas
+  - pint
   - pip
   - pseudonetcdf
   - pydap
@@ -44,4 +45,3 @@ dependencies:
   - zarr
   - pip:
     - numbagg
-    - pint
diff --git a/ci/requirements/py37-windows.yml b/ci/requirements/py37-windows.yml
@@ -19,7 +19,7 @@ dependencies:
   - hdf5
   - hypothesis
   - iris
-  - isort
+  - isort=4.3.21
   - lxml    # Optional dep of pydap
   - matplotlib
   - mypy=0.761  # Must match .pre-commit-config.yaml
@@ -28,6 +28,7 @@ dependencies:
   - numba
   - numpy
   - pandas
+  - pint
   - pip
   - pseudonetcdf
   - pydap
@@ -44,4 +45,3 @@ dependencies:
   - zarr
   - pip:
     - numbagg
-    - pint
diff --git a/ci/requirements/py37.yml b/ci/requirements/py37.yml
@@ -19,7 +19,7 @@ dependencies:
   - hdf5
   - hypothesis
   - iris
-  - isort
+  - isort=4.3.21
   - lxml    # Optional dep of pydap
   - matplotlib
   - mypy=0.761  # Must match .pre-commit-config.yaml
@@ -28,6 +28,7 @@ dependencies:
   - numba
   - numpy
   - pandas
+  - pint
   - pip
   - pseudonetcdf
   - pydap
@@ -44,4 +45,3 @@ dependencies:
   - zarr
   - pip:
     - numbagg
-    - pint
diff --git a/ci/requirements/py38-all-but-dask.yml b/ci/requirements/py38-all-but-dask.yml
@@ -16,7 +16,7 @@ dependencies:
   - h5py
   - hdf5
   - hypothesis
-  - isort
+  - isort=4.3.21
   - lxml    # Optional dep of pydap
   - matplotlib
   - mypy=0.761  # Must match .pre-commit-config.yaml
@@ -25,6 +25,7 @@ dependencies:
   - numba
   - numpy
   - pandas
+  - pint
   - pip
   - pseudonetcdf
   - pydap
@@ -41,4 +42,3 @@ dependencies:
   - zarr
   - pip:
     - numbagg
-    - pint
diff --git a/ci/requirements/py38.yml b/ci/requirements/py38.yml
@@ -19,7 +19,7 @@ dependencies:
   - hdf5
   - hypothesis
   - iris
-  - isort
+  - isort=4.3.21
   - lxml    # Optional dep of pydap
   - matplotlib
   - mypy=0.780  # Must match .pre-commit-config.yaml
@@ -28,6 +28,7 @@ dependencies:
   - numba
   - numpy
   - pandas
+  - pint
   - pip
   - pseudonetcdf
   - pydap
@@ -44,4 +45,3 @@ dependencies:
   - zarr
   - pip:
     - numbagg
-    - pint
diff --git a/doc/api.rst b/doc/api.rst
@@ -360,7 +360,6 @@ Computation
    DataArray.rolling_exp
    DataArray.weighted
    DataArray.coarsen
-   DataArray.dt
    DataArray.resample
    DataArray.get_axis_num
    DataArray.diff
@@ -369,7 +368,6 @@ Computation
    DataArray.differentiate
    DataArray.integrate
    DataArray.polyfit
-   DataArray.str
    DataArray.map_blocks
 
 

diff --git a/doc/plotting.rst b/doc/plotting.rst
@@ -743,12 +743,13 @@ This script will plot the air temperature on a map.
 
     air = xr.tutorial.open_dataset("air_temperature").air
 
-    ax = plt.axes(projection=ccrs.Orthographic(-80, 35))
-    air.isel(time=0).plot.contourf(ax=ax, transform=ccrs.PlateCarree())
-    ax.set_global()
+    p = air.isel(time=0).plot(
+        subplot_kws=dict(projection=ccrs.Orthographic(-80, 35), facecolor="gray"),
+        transform=ccrs.PlateCarree())
+    p.axes.set_global()
 
     @savefig plotting_maps_cartopy.png width=100%
-    ax.coastlines()
+    p.axes.coastlines()
 
 When faceting on maps, the projection can be transferred to the ``plot``
 function using the ``subplot_kws`` keyword. The axes for the subplots created

diff --git a/doc/related-projects.rst b/doc/related-projects.rst
@@ -76,7 +76,7 @@ Visualization
 - `Datashader <https://datashader.org>`_, `geoviews <http://geo.holoviews.org>`_, `holoviews <http://holoviews.org/>`_, : visualization packages for large data.
 - `hvplot <https://hvplot.pyviz.org/>`_ : A high-level plotting API for the PyData ecosystem built on HoloViews.
 - `psyplot <https://psyplot.readthedocs.io>`_: Interactive data visualization with python.
-- `xarray-leaflet <https://github.com/davidbrochart/xarray_leaflet>`_: An xarray extension for tiles map plotting based on ipyleaflet.
+- `xarray-leaflet <https://github.com/davidbrochart/xarray_leaflet>`_: An xarray extension for tiled map plotting based on ipyleaflet.
 
 Non-Python projects
 ~~~~~~~~~~~~~~~~~~~

diff --git a/doc/whats-new.rst b/doc/whats-new.rst
@@ -14,14 +14,58 @@ What's New
 
     np.random.seed(123456)
 
+.. _whats-new.0.16.1:
+
+v0.16.1 (unreleased)
+---------------------
+
+Breaking changes
+~~~~~~~~~~~~~~~~
+
+
+New Features
+~~~~~~~~~~~~
+
+
+Bug fixes
+~~~~~~~~~
+
+
+Documentation
+~~~~~~~~~~~~~
+
+
+Internal Changes
+~~~~~~~~~~~~~~~~
+
+
 .. _whats-new.0.16.0:
 
-v0.16.0 (unreleased)
+v0.16.0 (2020-07-11)
 ---------------------
 
+This release adds `xarray.cov` & `xarray.corr` for covariance & correlation
+respectively; the `idxmax` & `idxmin` methods, the `polyfit` method &
+`xarray.polyval` for fitting polynomials, as well as a number of documentation
+improvements, other features, and bug fixes. Many thanks to all 44 contributors
+who contributed to this release:
+
+Akio Taniguchi, Andrew Williams, Aurélien Ponte, Benoit Bovy, Dave Cole, David
+Brochart, Deepak Cherian, Elliott Sales de Andrade, Etienne Combrisson, Hossein
+Madadi, Huite, Joe Hamman, Kai Mühlbauer, Keisuke Fujii, Maik Riechert, Marek
+Jacob, Mathias Hauser, Matthieu Ancellin, Maximilian Roos, Noah D Brenowitz,
+Oriol Abril, Pascal Bourgault, Phillip Butcher, Prajjwal Nijhara, Ray Bell, Ryan
+Abernathey, Ryan May, Spencer Clark, Spencer Hill, Srijan Saurav, Stephan Hoyer,
+Taher Chegini, Todd, Tom Nicholas, Yohai Bar Sinai, Yunus Sevinchan,
+arabidopsis, aurghs, clausmichele, dmey, johnomotani, keewis, raphael dussin,
+risebell
+
 Breaking changes
 ~~~~~~~~~~~~~~~~
 
+- Minimum supported versions for the following packages have changed: ``dask >=2.9``,
+  ``distributed>=2.9``.
+  By `Deepak Cherian <https://github.com/dcherian>`_
 - ``groupby`` operations will restore coord dimension order. Pass ``restore_coord_dims=False``
   to revert to previous behavior.
 - :meth:`DataArray.transpose` will now transpose coordinates by default.
@@ -43,15 +87,6 @@ Breaking changes
   default (:issue:`4176`)
   By `Stephan Hoyer <https://github.com/shoyer>`_.
 
-Enhancements
-~~~~~~~~~~~~
-- Performance improvement of :py:meth:`DataArray.interp` and :py:func:`Dataset.interp`
-  For orthogonal linear- and nearest-neighbor interpolation, we do 1d-interpolation sequentially
-  rather than interpolating in multidimensional space. (:issue:`2223`)
-  By `Keisuke Fujii <https://github.com/fujiisoup>`_.
-- :py:meth:`DataArray.reset_index` and :py:meth:`Dataset.reset_index` now keep
-  coordinate attributes (:pull:`4103`). By `Oriol Abril <https://github.com/OriolAbril>`_.
-
 New Features
 ~~~~~~~~~~~~
 - :py:meth:`DataArray.argmin` and :py:meth:`DataArray.argmax` now support
@@ -61,15 +96,19 @@ New Features
   (:pull:`3936`)
   By `John Omotani <https://github.com/johnomotani>`_, thanks to `Keisuke Fujii
   <https://github.com/fujiisoup>`_ for work in :pull:`1469`.
+- Added :py:func:`xarray.cov` and :py:func:`xarray.corr` (:issue:`3784`, :pull:`3550`, :pull:`4089`).
+  By `Andrew Williams <https://github.com/AndrewWilliams3142>`_ and `Robin Beer <https://github.com/r-beer>`_.
+- Implement :py:meth:`DataArray.idxmax`, :py:meth:`DataArray.idxmin`,
+  :py:meth:`Dataset.idxmax`, :py:meth:`Dataset.idxmin`.  (:issue:`60`, :pull:`3871`)
+  By `Todd Jennings <https://github.com/toddrjen>`_
+- Added :py:meth:`DataArray.polyfit` and :py:func:`xarray.polyval` for fitting
+  polynomials. (:issue:`3349`, :pull:`3733`, :pull:`4099`)
+  By `Pascal Bourgault <https://github.com/aulemahal>`_.
 - Added :py:meth:`xarray.infer_freq` for extending frequency inferring to CFTime indexes and data (:pull:`4033`).
   By `Pascal Bourgault <https://github.com/aulemahal>`_.
 - ``chunks='auto'`` is now supported in the ``chunks`` argument of
   :py:meth:`Dataset.chunk`. (:issue:`4055`)
   By `Andrew Williams <https://github.com/AndrewWilliams3142>`_
-- Added :py:func:`xarray.cov` and :py:func:`xarray.corr` (:issue:`3784`, :pull:`3550`, :pull:`4089`).
-  By `Andrew Williams <https://github.com/AndrewWilliams3142>`_ and `Robin Beer <https://github.com/r-beer>`_.
-- Added :py:meth:`DataArray.polyfit` and :py:func:`xarray.polyval` for fitting polynomials. (:issue:`3349`, :pull:`3733`, :pull:`4099`)
-  By `Pascal Bourgault <https://github.com/aulemahal>`_.
 - Control over attributes of result in :py:func:`merge`, :py:func:`concat`,
   :py:func:`combine_by_coords` and :py:func:`combine_nested` using
   combine_attrs keyword argument. (:issue:`3865`, :pull:`3877`)
@@ -79,19 +118,10 @@ New Features
   the exception when a dimension passed to ``isel`` is not present with a
   warning, or just ignore the dimension. (:issue:`3866`, :pull:`3923`)
   By `John Omotani <https://github.com/johnomotani>`_
-- Limited the length of array items with long string reprs to a
-  reasonable width (:pull:`3900`)
-  By `Maximilian Roos <https://github.com/max-sixty>`_
-- Limited the number of lines of large arrays when numpy reprs would have greater than 40.
-  (:pull:`3905`)
-  By `Maximilian Roos <https://github.com/max-sixty>`_
-- Implement :py:meth:`DataArray.idxmax`, :py:meth:`DataArray.idxmin`,
-  :py:meth:`Dataset.idxmax`, :py:meth:`Dataset.idxmin`.  (:issue:`60`, :pull:`3871`)
-  By `Todd Jennings <https://github.com/toddrjen>`_
 - Support dask handling for :py:meth:`DataArray.idxmax`, :py:meth:`DataArray.idxmin`,
   :py:meth:`Dataset.idxmax`, :py:meth:`Dataset.idxmin`.  (:pull:`3922`, :pull:`4135`)
   By `Kai Mühlbauer <https://github.com/kmuehlbauer>`_ and `Pascal Bourgault <https://github.com/aulemahal>`_.
-- More support for unit aware arrays with pint (:pull:`3643`, :pull:`3975`)
+- More support for unit aware arrays with pint (:pull:`3643`, :pull:`3975`, :pull:`4163`)
   By `Justus Magin <https://github.com/keewis>`_.
 - Support overriding existing variables in ``to_zarr()`` with ``mode='a'`` even
   without ``append_dim``, as long as dimension sizes do not change.
@@ -119,7 +149,30 @@ New Features
   (:py:func:`xarray.open_dataarray`, :py:func:`xarray.open_dataarray`,
   :py:func:`xarray.decode_cf`) that allows to disable/enable the decoding of timedeltas
   independently of time decoding (:issue:`1621`)
-  `Aureliana Barghini <https://github.com/aurghs>`
+  `Aureliana Barghini <https://github.com/aurghs>`_
+
+Enhancements
+~~~~~~~~~~~~
+- Performance improvement of :py:meth:`DataArray.interp` and :py:func:`Dataset.interp`
+  For orthogonal linear- and nearest-neighbor interpolation, we do 1d-interpolation sequentially
+  rather than interpolating in multidimensional space. (:issue:`2223`)
+  By `Keisuke Fujii <https://github.com/fujiisoup>`_.
+- Major performance improvement for :py:meth:`Dataset.from_dataframe` when the
+  dataframe has a MultiIndex (:pull:`4184`).
+  By `Stephan Hoyer <https://github.com/shoyer>`_.
+  - :py:meth:`DataArray.reset_index` and :py:meth:`Dataset.reset_index` now keep
+  coordinate attributes (:pull:`4103`). By `Oriol Abril <https://github.com/OriolAbril>`_.
+- Axes kwargs such as ``facecolor`` can now be passed to :py:meth:`DataArray.plot` in ``subplot_kws``.
+  This works for both single axes plots and FacetGrid plots.
+  By `Raphael Dussin <https://github.com/raphaeldussin>`_.
+- Array items with long string reprs are now limited to a
+  reasonable width (:pull:`3900`)
+  By `Maximilian Roos <https://github.com/max-sixty>`_
+- Large arrays whose numpy reprs would have greater than 40 lines are now
+  limited to a reasonable length.
+  (:pull:`3905`)
+  By `Maximilian Roos <https://github.com/max-sixty>`_
+
 
 Bug fixes
 ~~~~~~~~~
@@ -133,8 +186,9 @@ Bug fixes
   By `Deepak Cherian <https://github.com/dcherian>`_.
 - ``ValueError`` is raised when ``fill_value`` is not a scalar in :py:meth:`full_like`. (:issue:`3977`)
   By `Huite Bootsma <https://github.com/huite>`_.
-- Fix wrong order in converting a ``pd.Series`` with a MultiIndex to ``DataArray``. (:issue:`3951`)
-  By `Keisuke Fujii <https://github.com/fujiisoup>`_.
+- Fix wrong order in converting a ``pd.Series`` with a MultiIndex to ``DataArray``.
+  (:issue:`3951`, :issue:`4186`)
+  By `Keisuke Fujii <https://github.com/fujiisoup>`_ and `Stephan Hoyer <https://github.com/shoyer>`_.
 - Fix renaming of coords when one or more stacked coords is not in
   sorted order during stack+groupby+apply operations. (:issue:`3287`,
   :pull:`3906`) By `Spencer Hill <https://github.com/spencerahill>`_
@@ -167,6 +221,8 @@ Bug fixes
   By `Mathias Hauser <https://github.com/mathause>`_.
 - Fix html repr in untrusted notebooks: fallback to plain text repr. (:pull:`4053`)
   By `Benoit Bovy <https://github.com/benbovy>`_.
+- Fix :py:meth:`DataArray.to_unstacked_dataset` for single-dimension variables. (:issue:`4049`)
+  By `Deepak Cherian <https://github.com/dcherian>`_
 - Fix :py:func:`open_rasterio` for ``WarpedVRT`` with specified ``src_crs``. (:pull:`4104`)
   By `Dave Cole <https://github.com/dtpc>`_.