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Releases: databio/pypiper

v0.14.2

07 May 15:59
d1e3ece
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[0.14.2] -- 2024-05-07

Changed

v0.14.1

19 Apr 14:17
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[0.14.1] -- 2024-04-19

Changed

  • remove pipestat_project_name from PipelineManager parameters
  • refactor pipestat_sample_name to pipestat_record_identifier in PipelineManager parameters
  • update requirements for pipestat 0.9.0, ubiquerg 0.8.0, and yacman 0.9.3
  • set force_overwrite to default to true, Issue #209

v0.14.0

22 Dec 16:40
3a8465a
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Pypiper v0.14.0

[0.14.0] -- 2023-12-22

Changed

  • refactor for pipestat v0.6.0 release
  • drop python 2.7
  • updated requirements
  • changed message_raw to be a value_dict when reporting to conform to pipestat
  • Fixed

  • fixed #196 and #197
  • Added

  • added force_overwrite to report_result and report_object
  • added pipestat_pipeline_type, defaulting to sample-level

v0.14.0a2

14 Dec 15:59
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v0.14.0a2 Pre-release
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v0.14.0a2

v0.14.0a1

15 Nov 23:13
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v0.14.0a1 Pre-release
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v0.14.0a1

v0.13.3a1

04 Oct 19:57
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v0.13.3a1 Pre-release
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v0.13.3a1

v0.13.2

02 Aug 20:26
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[0.13.2] -- 2023-08-02

Fixed

  • fixed self.new_start overriding checkpoints.

v0.13.1

14 Jul 20:13
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  • added _safe_write_to_file back into pypiper for Pepatac backwards compatibility

v0.13.0

29 Jun 20:05
53850a5
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-Added support for pipestat

v0.12.3

25 Jan 22:05
5fa2d14
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Release version 0.12.3