Added 'U' to non-ambiguous nucleotides to calculate gc_fraction #4727
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added 3 commits
May 13, 2024 11:59
peterjc
approved these changes
May 13, 2024
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This look good to me - @MarkusPiotrowski can you give a quick second opinion?
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Closes #4722
The nucleotide 'U' is added to the non-ambiguous nucleotides to calculate the GC content (gc_fraction function in SeqUtils). In this way, the gc_fraction supports RNA sequences (added a test for it). 'U' is also added to gc_values in order to calculate the weighted gc_fraction.