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Research engineering

Scientific research tools and workflow

This repository is a long term quest for the Holy Grail of an ideal research workflow. Although this ideal is not achievable in practice, the following features are implicitly driving my search.

  • Minimalistic and lightweight.
  • Programming language agnostic.
  • Supports robust code and data collaboration.
  • Flexible to adapt to various computational environments.
    • local or cloud
    • personal machine or research cluster
    • Windows, Mac or Liunx
  • Supports static and interactive report generation, including scientific manuscripts.
  • Can survive if components are no longer maintained.
  • Does not depend on propritary software.
  • Modular within and between projects.
  • Scales in code, data and team size.

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Research engineering: scientific research tools and workflow

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