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Python library for linear mixed effects model fitting

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andportnoy/mixed

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Prerequisites

Python, R, Suite Sparse installed.

On a Mac you can install the above using Homebrew:

brew install python r suite-sparse

Installation

git clone --recurse-submodules https://github.com/andportnoy/mixed
make setup

Tests

Enter a list of columns in columns.txt and the desired mixed effects formula in formula.txt, then to compare outputs against lme4 in R run make.

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Python library for linear mixed effects model fitting

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