Fix "ValueError: relative path can't be expressed as a file URI" #2934
Workflow file for this run
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| name: PR | |
| on: | |
| pull_request_target: | |
| types: | |
| - opened | |
| - synchronize | |
| - ready_for_review | |
| - labeled | |
| jobs: | |
| env: # setup shared env | |
| runs-on: ubuntu-latest | |
| permissions: { } | |
| outputs: | |
| python-version: '3.8' | |
| source-ref: refs/pull/${{github.event.pull_request.number}}/merge | |
| upload-binaries: >- | |
| ${{ contains(github.event.pull_request.labels.*.name, 'PR: upload binaries') }} | |
| steps: | |
| - run: echo done | |
| changes: # detect changes | |
| runs-on: ubuntu-latest | |
| permissions: | |
| contents: read | |
| outputs: | |
| src: ${{ steps.filter.outputs.src }} | |
| scripts: ${{ steps.filter.outputs.scripts }} | |
| doc: ${{ steps.filter.outputs.doc }} | |
| build: ${{ steps.filter.outputs.build }} | |
| steps: | |
| - uses: dorny/paths-filter@v2 | |
| id: filter | |
| with: | |
| filters: | | |
| src: | |
| - '.github/workflows/pytest.yml' | |
| - '.github/workflows/guitest.yml' | |
| - '.github/workflows/coverage.yml' | |
| - '.github/actions/**' | |
| - 'src/**' | |
| - 'requirements*' | |
| scripts: | |
| - '.github/workflows/scripttest.yml' | |
| - '.github/actions/**' | |
| - 'scripts/**' | |
| - 'src/**' | |
| - 'requirements*' | |
| doc: | |
| - '.github/workflows/documentation.yml' | |
| - '.github/actions/**' | |
| - 'doc/**' | |
| - 'src/**' | |
| - 'requirements*' | |
| build: | |
| - '.github/workflows/build*.yml' | |
| - '.github/actions/**' | |
| - 'build/**' | |
| - 'src/**' | |
| - 'requirements*' | |
| gatekeeper: # check user's permissions | |
| runs-on: ubuntu-latest | |
| permissions: read-all | |
| steps: | |
| - name: Check if PR has label | |
| id: label_check | |
| uses: docker://agilepathway/pull-request-label-checker:v1.2.9 | |
| with: | |
| one_of: 'PR: safe to check' | |
| repo_token: ${{ secrets.GITHUB_TOKEN }} | |
| allow_failure: true | |
| - name: Check if user has write access | |
| if: steps.label_check.outputs.label_check == 'failure' | |
| uses: lannonbr/repo-permission-check-action@2bb8c89ba8bf115c4bfab344d6a6f442b24c9a1f | |
| with: | |
| permission: write | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| # ---------------------------------------------------------------------------- | |
| # PR stage: Draft | |
| coverage_draft: | |
| needs: [ changes, gatekeeper, env ] | |
| if: ${{ needs.changes.outputs.src == 'true' }} | |
| uses: ./.github/workflows/coverage.yml | |
| secrets: | |
| CODECOV_TOKEN: ${{secrets.CODECOV_TOKEN}} | |
| with: | |
| python-version: ${{needs.env.outputs.python-version}} | |
| ref: ${{needs.env.outputs.source-ref}} | |
| guitest_draft: | |
| needs: [ changes, gatekeeper, env ] | |
| if: ${{ needs.changes.outputs.src == 'true' }} | |
| uses: ./.github/workflows/guitest.yml | |
| with: | |
| python-version: ${{needs.env.outputs.python-version}} | |
| matrix: '{"os": ["windows-latest"]}' | |
| ref: ${{needs.env.outputs.source-ref}} | |
| application_tester_draft: | |
| needs: [ changes, gatekeeper, env ] | |
| if: ${{ needs.changes.outputs.src == 'true' || needs.changes.outputs.scripts == 'true'}} | |
| uses: ./.github/workflows/application_tester.yml | |
| with: | |
| python-version: ${{needs.env.outputs.python-version}} | |
| matrix: '{"os": ["ubuntu-latest"]}' | |
| ref: ${{needs.env.outputs.source-ref}} | |
| scripttest_draft: | |
| needs: [ changes, gatekeeper, env ] | |
| if: ${{ needs.changes.outputs.scripts == 'true' }} | |
| uses: ./.github/workflows/scripttest.yml | |
| with: | |
| python-version: ${{needs.env.outputs.python-version}} | |
| ref: ${{needs.env.outputs.source-ref}} | |
| # ---------------------------------------------------------------------------- | |
| # PR stage: Ready | |
| pytest: | |
| needs: [ changes, gatekeeper, env ] | |
| if: ${{needs.changes.outputs.src == 'true' && !github.event.pull_request.draft}} | |
| uses: ./.github/workflows/pytest.yml | |
| with: | |
| python-version: ${{needs.env.outputs.python-version}} | |
| matrix: '{"os": ["windows-latest", "macos-latest"]}' | |
| ref: ${{needs.env.outputs.source-ref}} | |
| guitest: | |
| needs: [ changes, gatekeeper, env ] | |
| if: ${{needs.changes.outputs.src == 'true' && !github.event.pull_request.draft}} | |
| uses: ./.github/workflows/guitest.yml | |
| with: | |
| python-version: ${{needs.env.outputs.python-version}} | |
| matrix: '{"os": ["ubuntu-latest", "macos-latest"]}' | |
| ref: ${{needs.env.outputs.source-ref}} | |
| application_tester: | |
| needs: [ changes, gatekeeper, env ] | |
| if: ${{ (needs.changes.outputs.src == 'true' || needs.changes.outputs.scripts == 'true') && !github.event.pull_request.draft}} | |
| uses: ./.github/workflows/application_tester.yml | |
| with: | |
| python-version: ${{needs.env.outputs.python-version}} | |
| matrix: '{"os": ["windows-latest", "macos-latest"]}' | |
| ref: ${{needs.env.outputs.source-ref}} | |
| # build binaries | |
| ubuntu: | |
| needs: [ changes, env ] | |
| if: ${{needs.changes.outputs.build == 'true' && !github.event.pull_request.draft}} | |
| uses: ./.github/workflows/build_ubuntu.yml | |
| with: | |
| upload: ${{ needs.env.outputs.upload-binaries == 'true' }} | |
| os: ubuntu-latest | |
| python-version: ${{needs.env.outputs.python-version}} | |
| ref: ${{needs.env.outputs.source-ref}} | |
| mac: | |
| needs: [ changes, env ] | |
| if: ${{needs.changes.outputs.build == 'true' && !github.event.pull_request.draft}} | |
| uses: ./.github/workflows/build_mac.yml | |
| with: | |
| upload: ${{ needs.env.outputs.upload-binaries == 'true' }} | |
| os: macos-latest | |
| python-version: ${{needs.env.outputs.python-version}} | |
| ref: ${{needs.env.outputs.source-ref}} | |
| windows: | |
| needs: [ changes, env ] | |
| if: ${{needs.changes.outputs.build == 'true' && !github.event.pull_request.draft}} | |
| uses: ./.github/workflows/build_windows.yml | |
| with: | |
| upload: ${{ needs.env.outputs.upload-binaries == 'true' }} | |
| os: windows-latest | |
| python-version: ${{needs.env.outputs.python-version}} | |
| ref: ${{needs.env.outputs.source-ref}} | |
| # check documentation build | |
| documentation: | |
| needs: [ changes, env ] | |
| if: ${{needs.changes.outputs.doc == 'true' && !github.event.pull_request.draft}} | |
| uses: ./.github/workflows/documentation.yml | |
| with: | |
| python-version: ${{needs.env.outputs.python-version}} | |
| ref: ${{needs.env.outputs.source-ref}} |