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@Raj-Lab-UCSF

Raj Lab @ UCSF

The Brain Networks Laboratory at UCSF is led by Dr. Ashish Raj, and focuses on applying network theory and computational tools to problems in neuroimaging.

Popular repositories

  1. Aggregation-Network-Diffusion Aggregation-Network-Diffusion Public

    Code for implementing the Aggregation-Network diffusion model (AND), as described in the paper: "Combined Model of Aggregation And Network Diffusion Recapitulates Alzheimer’s Regional Tau-PET " by …

    MATLAB 9 2

  2. spectrome spectrome Public

    Spectral graph model base code and examples

    Jupyter Notebook 7 5

  3. journalclub journalclub Public

    Journal Club

    3 8

  4. cortography cortography Public

    Utilities for brain atlas related tasks

    Jupyter Notebook 2 3

  5. Brainframe_old Brainframe_old Public

    Matlab functionality for creating 3D human & mouse brain renderings, with many options.

    MATLAB 2

  6. RajLab-Bibliography RajLab-Bibliography Public

    Bibliography files for RajLab papers

    TeX 2

Repositories

Showing 10 of 34 repositories
  • SuStaIn Public

    SuStaIn event based model, data preprocessing and analysis

    Jupyter Notebook 0 0 0 0 Updated May 31, 2024
  • EBM-Nexis Public

    Nexis code to be run on EBM time series, including forward/inverse and individual/cohort fitting

    Jupyter Notebook 0 0 0 0 Updated May 31, 2024
  • Nexis-Human Public

    Nexis set up to fit to individual human data (gene or global)

    Jupyter Notebook 0 0 0 0 Updated May 31, 2024
  • RajLab-Bibliography Public

    Bibliography files for RajLab papers

    TeX 2 0 0 0 Updated May 31, 2024
  • Nexis Public

    Code for running the extended Network Diffusion Model (eNDM)

    MATLAB 1 MIT 0 0 0 Updated May 29, 2024
  • Tau_Transport Public

    Code and data files required to generate all results for the axonal transport regulation project

    MATLAB 0 MIT 0 0 0 Updated May 29, 2024
  • journalclub Public

    Journal Club

    3 GPL-3.0 8 0 0 Updated May 20, 2024
  • CellTypeVulnerability Public

    Mouse tauopathy cell-type regional vulnerability project

    MATLAB 0 MIT 0 0 0 Updated Apr 12, 2024
  • Joint-structure-function-modeling-in-AD Public
    Jupyter Notebook 0 MIT 0 0 0 Updated Apr 9, 2024
  • IntDegSeg Public

    A repository for the article Integrative, Segregative, and Degenerate Harmonics of the Structural Connectome

    MATLAB 1 MIT 0 0 0 Updated Apr 4, 2024
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