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Update dependencies #2048

Merged
merged 32 commits into from
May 13, 2024
Merged

Update dependencies #2048

merged 32 commits into from
May 13, 2024

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bot-optimade
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Update dependencies

Automatically created PR from the dependabot_updates branch.

For more information see the "Dependabot updates" workflow.

To-do

  • Check that the diff is sensible, and that tests and builds pass with the new dependency versions.
  • Check whether the dependency versions in setup.py need updating, keeping the version requirements as loose as possible.
  • Make sure that the PR is squash merged, with a sensible commit message.

dependabot bot and others added 20 commits April 8, 2024 05:34
@dependabot
Bump mkdocstrings[python] from 0.24.1 to 0.24.3 (#2028)
6cae798 
Bumps [mkdocstrings[python]](https://github.com/mkdocstrings/mkdocstrings) from 0.24.1 to 0.24.3.
- [Release notes](https://github.com/mkdocstrings/mkdocstrings/releases)
- [Changelog](https://github.com/mkdocstrings/mkdocstrings/blob/main/CHANGELOG.md)
- [Commits](mkdocstrings/mkdocstrings@0.24.1...0.24.3)

---
updated-dependencies:
- dependency-name: mkdocstrings[python]
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
@dependabot
Bump ruff from 0.3.4 to 0.3.5 (#2029)
8f38397 
Bumps [ruff](https://github.com/astral-sh/ruff) from 0.3.4 to 0.3.5.
- [Release notes](https://github.com/astral-sh/ruff/releases)
- [Changelog](https://github.com/astral-sh/ruff/blob/main/CHANGELOG.md)
- [Commits](astral-sh/ruff@v0.3.4...v0.3.5)

---
updated-dependencies:
- dependency-name: ruff
  dependency-type: direct:development
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
@dependabot
Bump fastapi from 0.110.0 to 0.110.1 (#2030)
5ed1c28 
Bumps [fastapi](https://github.com/tiangolo/fastapi) from 0.110.0 to 0.110.1.
- [Release notes](https://github.com/tiangolo/fastapi/releases)
- [Commits](tiangolo/fastapi@0.110.0...0.110.1)

---
updated-dependencies:
- dependency-name: fastapi
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
@dependabot @ml-evs
Bump mkdocs-material from 9.5.16 to 9.5.17 (#2031)
70349ce 
Bumps [mkdocs-material](https://github.com/squidfunk/mkdocs-material) from 9.5.16 to 9.5.17.
- [Release notes](https://github.com/squidfunk/mkdocs-material/releases)
- [Changelog](https://github.com/squidfunk/mkdocs-material/blob/master/CHANGELOG)
- [Commits](squidfunk/mkdocs-material@9.5.16...9.5.17)

---
updated-dependencies:
- dependency-name: mkdocs-material
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Matthew Evans <7916000+ml-evs@users.noreply.github.com>
@dependabot
Bump jarvis-tools from 2024.3.30 to 2024.4.10 (#2033)
e8f440a 
Bumps [jarvis-tools](https://github.com/usnistgov/jarvis) from 2024.3.30 to 2024.4.10.
- [Release notes](https://github.com/usnistgov/jarvis/releases)
- [Commits](usnistgov/jarvis@v2024.3.30...v2024.4.10)

---
updated-dependencies:
- dependency-name: jarvis-tools
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
@dependabot
Bump ruff from 0.3.5 to 0.3.7 (#2034)
e7c652d 
Bumps [ruff](https://github.com/astral-sh/ruff) from 0.3.5 to 0.3.7.
- [Release notes](https://github.com/astral-sh/ruff/releases)
- [Changelog](https://github.com/astral-sh/ruff/blob/main/CHANGELOG.md)
- [Commits](astral-sh/ruff@v0.3.5...v0.3.7)

---
updated-dependencies:
- dependency-name: ruff
  dependency-type: direct:development
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
@dependabot
Bump pymatgen from 2024.3.1 to 2024.4.13 (#2035)
e301499 
Bumps [pymatgen](https://github.com/materialsproject/pymatgen) from 2024.3.1 to 2024.4.13.
- [Release notes](https://github.com/materialsproject/pymatgen/releases)
- [Changelog](https://github.com/materialsproject/pymatgen/blob/master/docs/CHANGES.md)
- [Commits](materialsproject/pymatgen@v2024.3.1...v2024.4.13)

---
updated-dependencies:
- dependency-name: pymatgen
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
@dependabot
Bump mkdocs-material from 9.5.17 to 9.5.18 (#2036)
8063752 
Bumps [mkdocs-material](https://github.com/squidfunk/mkdocs-material) from 9.5.17 to 9.5.18.
- [Release notes](https://github.com/squidfunk/mkdocs-material/releases)
- [Changelog](https://github.com/squidfunk/mkdocs-material/blob/master/CHANGELOG)
- [Commits](squidfunk/mkdocs-material@9.5.17...9.5.18)

---
updated-dependencies:
- dependency-name: mkdocs-material
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
@dependabot
Bump fastapi from 0.110.1 to 0.110.2 (#2038)
46a9214 
Bumps [fastapi](https://github.com/tiangolo/fastapi) from 0.110.1 to 0.110.2.
- [Release notes](https://github.com/tiangolo/fastapi/releases)
- [Commits](tiangolo/fastapi@0.110.1...0.110.2)

---
updated-dependencies:
- dependency-name: fastapi
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
@dependabot
Bump ruff from 0.3.7 to 0.4.1 (#2039)
cf07f18 
Bumps [ruff](https://github.com/astral-sh/ruff) from 0.3.7 to 0.4.1.
- [Release notes](https://github.com/astral-sh/ruff/releases)
- [Changelog](https://github.com/astral-sh/ruff/blob/main/CHANGELOG.md)
- [Commits](astral-sh/ruff@v0.3.7...v0.4.1)

---
updated-dependencies:
- dependency-name: ruff
  dependency-type: direct:development
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
@dependabot
Bump chuhlomin/render-template from 1.9 to 1.10 (#2040)
34da8b9 
Bumps [chuhlomin/render-template](https://github.com/chuhlomin/render-template) from 1.9 to 1.10.
- [Release notes](https://github.com/chuhlomin/render-template/releases)
- [Commits](chuhlomin/render-template@v1.9...v1.10)

---
updated-dependencies:
- dependency-name: chuhlomin/render-template
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
@dependabot
Bump mypy from 1.9.0 to 1.10.0 (#2041)
d73c6cc 
Bumps [mypy](https://github.com/python/mypy) from 1.9.0 to 1.10.0.
- [Changelog](https://github.com/python/mypy/blob/master/CHANGELOG.md)
- [Commits](python/mypy@1.9.0...v1.10.0)

---
updated-dependencies:
- dependency-name: mypy
  dependency-type: direct:development
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
@dependabot
Bump pydantic[email] from 2.6.4 to 2.7.1 (#2043)
4591c0e 
Bumps [pydantic[email]](https://github.com/pydantic/pydantic) from 2.6.4 to 2.7.1.
- [Release notes](https://github.com/pydantic/pydantic/releases)
- [Changelog](https://github.com/pydantic/pydantic/blob/main/HISTORY.md)
- [Commits](pydantic/pydantic@v2.6.4...v2.7.1)

---
updated-dependencies:
- dependency-name: pydantic[email]
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
@dependabot
Bump ruff from 0.4.1 to 0.4.2 (#2044)
402cd72 
Bumps [ruff](https://github.com/astral-sh/ruff) from 0.4.1 to 0.4.2.
- [Release notes](https://github.com/astral-sh/ruff/releases)
- [Changelog](https://github.com/astral-sh/ruff/blob/main/CHANGELOG.md)
- [Commits](astral-sh/ruff@v0.4.1...v0.4.2)

---
updated-dependencies:
- dependency-name: ruff
  dependency-type: direct:development
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
@dependabot
Bump pymongo from 4.6.3 to 4.7.0 (#2045)
e8d310e 
Bumps [pymongo](https://github.com/mongodb/pymongo) from 4.6.3 to 4.7.0.
- [Commits](https://github.com/mongodb/pymongo/commits)

---
updated-dependencies:
- dependency-name: pymongo
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
@dependabot
Bump pytest from 8.1.1 to 8.2.0 (#2046)
e712929 
Bumps [pytest](https://github.com/pytest-dev/pytest) from 8.1.1 to 8.2.0.
- [Release notes](https://github.com/pytest-dev/pytest/releases)
- [Changelog](https://github.com/pytest-dev/pytest/blob/main/CHANGELOG.rst)
- [Commits](pytest-dev/pytest@8.1.1...8.2.0)

---
updated-dependencies:
- dependency-name: pytest
  dependency-type: direct:development
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
@dependabot
Bump mkdocstrings[python] from 0.24.3 to 0.25.0 (#2047)
c07c5d9 
Bumps [mkdocstrings[python]](https://github.com/mkdocstrings/mkdocstrings) from 0.24.3 to 0.25.0.
- [Release notes](https://github.com/mkdocstrings/mkdocstrings/releases)
- [Changelog](https://github.com/mkdocstrings/mkdocstrings/blob/main/CHANGELOG.md)
- [Commits](mkdocstrings/mkdocstrings@0.24.3...0.25.0)

---
updated-dependencies:
- dependency-name: mkdocstrings[python]
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
@dependabot
Bump mkdocs from 1.5.3 to 1.6.0 (#2037)
15a73de 
Bumps [mkdocs](https://github.com/mkdocs/mkdocs) from 1.5.3 to 1.6.0.
- [Release notes](https://github.com/mkdocs/mkdocs/releases)
- [Commits](mkdocs/mkdocs@1.5.3...1.6.0)

---
updated-dependencies:
- dependency-name: mkdocs
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
@dependabot @ml-evs
Bump mkdocs-material from 9.5.18 to 9.5.19 (#2042)
512d1f2 
Bumps [mkdocs-material](https://github.com/squidfunk/mkdocs-material) from 9.5.18 to 9.5.19.
- [Release notes](https://github.com/squidfunk/mkdocs-material/releases)
- [Changelog](https://github.com/squidfunk/mkdocs-material/blob/master/CHANGELOG)
- [Commits](squidfunk/mkdocs-material@9.5.18...9.5.19)

---
updated-dependencies:
- dependency-name: mkdocs-material
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Matthew Evans <7916000+ml-evs@users.noreply.github.com>
@bot-optimade
Update pre-commit hooks
b55d795
@bot-optimade bot-optimade added CI Continuous Integration - GitHub Actions issues (NOT related to the repository Action) dependency_updates Issues pertaining to updates to our dependencies that are breaking the eager build labels Apr 29, 2024
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codecov bot commented Apr 29, 2024 •
edited

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 90.76%. Comparing base (9da9e2c) to head (4309653).

Additional details and impacted files 
@@           Coverage Diff           @@
##           master    #2048   +/-   ##
=======================================
  Coverage   90.76%   90.76%           
=======================================
  Files          75       75           
  Lines        4730     4730           
=======================================
  Hits         4293     4293           
  Misses        437      437
Flag Coverage Δ
project 90.76% <ø> (ø)
validator 90.76% <ø> (ø)

Flags with carried forward coverage won't be shown. Click here to find out more.

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dependabot bot added 4 commits May 6, 2024 05:58
@dependabot
Bump pymongo from 4.7.0 to 4.7.1 (#2050)
fd03578 
Bumps [pymongo](https://github.com/mongodb/mongo-python-driver) from 4.7.0 to 4.7.1.
- [Release notes](https://github.com/mongodb/mongo-python-driver/releases)
- [Changelog](https://github.com/mongodb/mongo-python-driver/blob/master/doc/changelog.rst)
- [Commits](mongodb/mongo-python-driver@4.7.0...4.7.1)

---
updated-dependencies:
- dependency-name: pymongo
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
@dependabot
Bump mike from 2.0.0 to 2.1.1 (#2051)
f61b7d1 
Bumps [mike](https://github.com/jimporter/mike) from 2.0.0 to 2.1.1.
- [Release notes](https://github.com/jimporter/mike/releases)
- [Changelog](https://github.com/jimporter/mike/blob/master/CHANGES.md)
- [Commits](jimporter/mike@v2.0.0...v2.1.1)

---
updated-dependencies:
- dependency-name: mike
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
@dependabot
Bump mkdocstrings[python] from 0.25.0 to 0.25.1 (#2052)
5a4ae72 
Bumps [mkdocstrings[python]](https://github.com/mkdocstrings/mkdocstrings) from 0.25.0 to 0.25.1.
- [Release notes](https://github.com/mkdocstrings/mkdocstrings/releases)
- [Changelog](https://github.com/mkdocstrings/mkdocstrings/blob/main/CHANGELOG.md)
- [Commits](mkdocstrings/mkdocstrings@0.25.0...0.25.1)

---
updated-dependencies:
- dependency-name: mkdocstrings[python]
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
@dependabot
Bump fastapi from 0.110.2 to 0.111.0 (#2054)
e290eed 
Bumps [fastapi](https://github.com/tiangolo/fastapi) from 0.110.2 to 0.111.0.
- [Release notes](https://github.com/tiangolo/fastapi/releases)
- [Commits](tiangolo/fastapi@0.110.2...0.111.0)

---
updated-dependencies:
- dependency-name: fastapi
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
dependabot bot and others added 8 commits May 6, 2024 06:11
@dependabot
Bump ruff from 0.4.2 to 0.4.3 (#2055)
032b12a 
Bumps [ruff](https://github.com/astral-sh/ruff) from 0.4.2 to 0.4.3.
- [Release notes](https://github.com/astral-sh/ruff/releases)
- [Changelog](https://github.com/astral-sh/ruff/blob/main/CHANGELOG.md)
- [Commits](astral-sh/ruff@v0.4.2...v0.4.3)

---
updated-dependencies:
- dependency-name: ruff
  dependency-type: direct:development
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
@dependabot
Bump pymatgen from 2024.4.13 to 2024.5.1 (#2056)
1366bb6 
Bumps [pymatgen](https://github.com/materialsproject/pymatgen) from 2024.4.13 to 2024.5.1.
- [Release notes](https://github.com/materialsproject/pymatgen/releases)
- [Changelog](https://github.com/materialsproject/pymatgen/blob/master/docs/CHANGES.md)
- [Commits](materialsproject/pymatgen@v2024.4.13...v2024.5.1)

---
updated-dependencies:
- dependency-name: pymatgen
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

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Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
@dependabot
Bump mkdocs-material from 9.5.19 to 9.5.22 (#2058)
87e3873 
Bumps [mkdocs-material](https://github.com/squidfunk/mkdocs-material) from 9.5.19 to 9.5.22.
- [Release notes](https://github.com/squidfunk/mkdocs-material/releases)
- [Changelog](https://github.com/squidfunk/mkdocs-material/blob/master/CHANGELOG)
- [Commits](squidfunk/mkdocs-material@9.5.19...9.5.22)

---
updated-dependencies:
- dependency-name: mkdocs-material
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

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Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
@dependabot
Bump pymongo from 4.7.1 to 4.7.2 (#2059)
692cf2d 
Bumps [pymongo](https://github.com/mongodb/mongo-python-driver) from 4.7.1 to 4.7.2.
- [Release notes](https://github.com/mongodb/mongo-python-driver/releases)
- [Changelog](https://github.com/mongodb/mongo-python-driver/blob/master/doc/changelog.rst)
- [Commits](mongodb/mongo-python-driver@4.7.1...4.7.2)

---
updated-dependencies:
- dependency-name: pymongo
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
@dependabot
Bump pre-commit from 3.7.0 to 3.7.1 (#2060)
f812d4f 
Bumps [pre-commit](https://github.com/pre-commit/pre-commit) from 3.7.0 to 3.7.1.
- [Release notes](https://github.com/pre-commit/pre-commit/releases)
- [Changelog](https://github.com/pre-commit/pre-commit/blob/main/CHANGELOG.md)
- [Commits](pre-commit/pre-commit@v3.7.0...v3.7.1)

---
updated-dependencies:
- dependency-name: pre-commit
  dependency-type: direct:development
  update-type: version-update:semver-patch
...

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@dependabot
Bump ruff from 0.4.3 to 0.4.4 (#2061)
dc0b460 
Bumps [ruff](https://github.com/astral-sh/ruff) from 0.4.3 to 0.4.4.
- [Release notes](https://github.com/astral-sh/ruff/releases)
- [Changelog](https://github.com/astral-sh/ruff/blob/main/CHANGELOG.md)
- [Commits](astral-sh/ruff@v0.4.3...v0.4.4)

---
updated-dependencies:
- dependency-name: ruff
  dependency-type: direct:development
  update-type: version-update:semver-patch
...

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@ml-evs
Update OpenAPI schemas
5b9ce5b
@ml-evs
Merge branch 'dependabot_updates' into ci/update-dependencies
4309653
@ml-evs ml-evs merged commit 33bb647 into master May 13, 2024
12 checks passed
@ml-evs ml-evs deleted the ci/update-dependencies branch May 13, 2024 19:57
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CI Continuous Integration - GitHub Actions issues (NOT related to the repository Action) dependency_updates Issues pertaining to updates to our dependencies that are breaking the eager build
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