forked from dmlc/xgboost
/
model.py
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model.py
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# type: ignore
"""Xgboost pyspark integration submodule for model API."""
# pylint: disable=fixme, invalid-name, protected-access, too-few-public-methods
import base64
import os
import uuid
from pyspark import SparkFiles, cloudpickle
from pyspark.ml.util import DefaultParamsReader, DefaultParamsWriter, MLReader, MLWriter
from pyspark.sql import SparkSession
from xgboost.core import Booster
from .utils import get_class_name, get_logger
def _get_or_create_tmp_dir():
root_dir = SparkFiles.getRootDirectory()
xgb_tmp_dir = os.path.join(root_dir, "xgboost-tmp")
if not os.path.exists(xgb_tmp_dir):
os.makedirs(xgb_tmp_dir)
return xgb_tmp_dir
def dump_model_to_json_file(model) -> str:
"""
Dump the input model to a local file in driver and return the path.
Parameters
----------
model:
an xgboost.XGBModel instance, such as
xgboost.XGBClassifier or xgboost.XGBRegressor instance
"""
# Dump the model to json format
tmp_file_name = os.path.join(_get_or_create_tmp_dir(), f"{uuid.uuid4()}.json")
model.save_model(tmp_file_name)
return tmp_file_name
def deserialize_xgb_model(model_string, xgb_model_creator):
"""
Deserialize an xgboost.XGBModel instance from the input model_string.
"""
xgb_model = xgb_model_creator()
xgb_model.load_model(bytearray(model_string.encode("utf-8")))
return xgb_model
def serialize_booster(booster):
"""
Serialize the input booster to a string.
Parameters
----------
booster:
an xgboost.core.Booster instance
"""
# TODO: change to use string io
tmp_file_name = os.path.join(_get_or_create_tmp_dir(), f"{uuid.uuid4()}.json")
booster.save_model(tmp_file_name)
with open(tmp_file_name, encoding="utf-8") as f:
ser_model_string = f.read()
return ser_model_string
def deserialize_booster(ser_model_string):
"""
Deserialize an xgboost.core.Booster from the input ser_model_string.
"""
booster = Booster()
# TODO: change to use string io
tmp_file_name = os.path.join(_get_or_create_tmp_dir(), f"{uuid.uuid4()}.json")
with open(tmp_file_name, "w", encoding="utf-8") as f:
f.write(ser_model_string)
booster.load_model(tmp_file_name)
return booster
_INIT_BOOSTER_SAVE_PATH = "init_booster.json"
def _get_spark_session():
return SparkSession.builder.getOrCreate()
class _SparkXGBSharedReadWrite:
@staticmethod
def saveMetadata(instance, path, sc, logger, extraMetadata=None):
"""
Save the metadata of an xgboost.spark._SparkXGBEstimator or
xgboost.spark._SparkXGBModel.
"""
instance._validate_params()
skipParams = ["callbacks", "xgb_model"]
jsonParams = {}
for p, v in instance._paramMap.items(): # pylint: disable=protected-access
if p.name not in skipParams:
jsonParams[p.name] = v
extraMetadata = extraMetadata or {}
callbacks = instance.getOrDefault(instance.callbacks)
if callbacks is not None:
logger.warning(
"The callbacks parameter is saved using cloudpickle and it "
"is not a fully self-contained format. It may fail to load "
"with different versions of dependencies."
)
serialized_callbacks = base64.encodebytes(
cloudpickle.dumps(callbacks)
).decode("ascii")
extraMetadata["serialized_callbacks"] = serialized_callbacks
init_booster = instance.getOrDefault(instance.xgb_model)
if init_booster is not None:
extraMetadata["init_booster"] = _INIT_BOOSTER_SAVE_PATH
DefaultParamsWriter.saveMetadata(
instance, path, sc, extraMetadata=extraMetadata, paramMap=jsonParams
)
if init_booster is not None:
ser_init_booster = serialize_booster(init_booster)
save_path = os.path.join(path, _INIT_BOOSTER_SAVE_PATH)
_get_spark_session().createDataFrame(
[(ser_init_booster,)], ["init_booster"]
).write.parquet(save_path)
@staticmethod
def loadMetadataAndInstance(pyspark_xgb_cls, path, sc, logger):
"""
Load the metadata and the instance of an xgboost.spark._SparkXGBEstimator or
xgboost.spark._SparkXGBModel.
:return: a tuple of (metadata, instance)
"""
metadata = DefaultParamsReader.loadMetadata(
path, sc, expectedClassName=get_class_name(pyspark_xgb_cls)
)
pyspark_xgb = pyspark_xgb_cls()
DefaultParamsReader.getAndSetParams(pyspark_xgb, metadata)
if "serialized_callbacks" in metadata:
serialized_callbacks = metadata["serialized_callbacks"]
try:
callbacks = cloudpickle.loads(
base64.decodebytes(serialized_callbacks.encode("ascii"))
)
pyspark_xgb.set(pyspark_xgb.callbacks, callbacks)
except Exception as e: # pylint: disable=W0703
logger.warning(
f"Fails to load the callbacks param due to {e}. Please set the "
"callbacks param manually for the loaded estimator."
)
if "init_booster" in metadata:
load_path = os.path.join(path, metadata["init_booster"])
ser_init_booster = (
_get_spark_session().read.parquet(load_path).collect()[0].init_booster
)
init_booster = deserialize_booster(ser_init_booster)
pyspark_xgb.set(pyspark_xgb.xgb_model, init_booster)
pyspark_xgb._resetUid(metadata["uid"]) # pylint: disable=protected-access
return metadata, pyspark_xgb
class SparkXGBWriter(MLWriter):
"""
Spark Xgboost estimator writer.
"""
def __init__(self, instance):
super().__init__()
self.instance = instance
self.logger = get_logger(self.__class__.__name__, level="WARN")
def saveImpl(self, path):
"""
save model.
"""
_SparkXGBSharedReadWrite.saveMetadata(self.instance, path, self.sc, self.logger)
class SparkXGBReader(MLReader):
"""
Spark Xgboost estimator reader.
"""
def __init__(self, cls):
super().__init__()
self.cls = cls
self.logger = get_logger(self.__class__.__name__, level="WARN")
def load(self, path):
"""
load model.
"""
_, pyspark_xgb = _SparkXGBSharedReadWrite.loadMetadataAndInstance(
self.cls, path, self.sc, self.logger
)
return pyspark_xgb
class SparkXGBModelWriter(MLWriter):
"""
Spark Xgboost model writer.
"""
def __init__(self, instance):
super().__init__()
self.instance = instance
self.logger = get_logger(self.__class__.__name__, level="WARN")
def saveImpl(self, path):
"""
Save metadata and model for a :py:class:`_SparkXGBModel`
- save metadata to path/metadata
- save model to path/model.json
"""
xgb_model = self.instance._xgb_sklearn_model
_SparkXGBSharedReadWrite.saveMetadata(self.instance, path, self.sc, self.logger)
model_save_path = os.path.join(path, "model")
xgb_model_file = dump_model_to_json_file(xgb_model)
# The json file written by Spark base on `booster.save_raw("json").decode("utf-8")`
# can't be loaded by XGBoost directly.
_get_spark_session().read.text(xgb_model_file).write.text(model_save_path)
class SparkXGBModelReader(MLReader):
"""
Spark Xgboost model reader.
"""
def __init__(self, cls):
super().__init__()
self.cls = cls
self.logger = get_logger(self.__class__.__name__, level="WARN")
def load(self, path):
"""
Load metadata and model for a :py:class:`_SparkXGBModel`
:return: SparkXGBRegressorModel or SparkXGBClassifierModel instance
"""
_, py_model = _SparkXGBSharedReadWrite.loadMetadataAndInstance(
self.cls, path, self.sc, self.logger
)
xgb_sklearn_params = py_model._gen_xgb_params_dict(
gen_xgb_sklearn_estimator_param=True
)
model_load_path = os.path.join(path, "model")
ser_xgb_model = _get_spark_session().read.text(model_load_path).collect()[0][0]
def create_xgb_model():
return self.cls._xgb_cls()(**xgb_sklearn_params)
xgb_model = deserialize_xgb_model(ser_xgb_model, create_xgb_model)
py_model._xgb_sklearn_model = xgb_model
return py_model