{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":145459109,"defaultBranch":"main","name":"scvelo","ownerLogin":"theislab","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2018-08-20T19:03:07.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/22319415?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1710703471.0","currentOid":""},"activityList":{"items":[{"before":"31226cd2a3a4316ddaad3bc57ab3507e4df5079b","after":"f21651c3b122860d8ae6b5a5173f242ba91c8761","ref":"refs/heads/main","pushedAt":"2024-04-12T16:39:13.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"WeilerP","name":"Philipp Weiler","path":"/WeilerP","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28675704?s=80&v=4"},"commit":{"message":"Fix `get_df` (#1231)\n\n* Fix `get_df` for default parameters (#649)\r\n\r\n* If  is a string, put it into a list\r\n\r\n* Add deprecation warning to `get_df`\r\n\r\n---------\r\n\r\nCo-authored-by: Philipp Weiler <weiler.philipp@gmail.com>","shortMessageHtmlLink":"Fix <code>get_df</code> (<a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2233395997\" data-permission-text=\"Title is private\" data-url=\"https://github.com/theislab/scvelo/issues/1231\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/theislab/scvelo/pull/1231/hovercard\" href=\"https://github.com/theislab/scvelo/pull/1231\">#1231</a>)"}},{"before":"6a0b63d4b71cff8d494c86a5354380e2adc154a7","after":"31226cd2a3a4316ddaad3bc57ab3507e4df5079b","ref":"refs/heads/main","pushedAt":"2024-04-12T15:52:18.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"WeilerP","name":"Philipp Weiler","path":"/WeilerP","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28675704?s=80&v=4"},"commit":{"message":"Make progress bar optional (#1234)\n\n* Update `recover_dynamics`\r\n\r\nAdd option to show progressbar or not.\r\n\r\n* Update `velocity_graph.py`\r\n\r\nAdd argument `show_progress_bar` to `VelocityGraph::compute_cosines` and\r\n`velocity_graph`.","shortMessageHtmlLink":"Make progress bar optional (<a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2240408285\" data-permission-text=\"Title is private\" data-url=\"https://github.com/theislab/scvelo/issues/1234\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/theislab/scvelo/pull/1234/hovercard\" href=\"https://github.com/theislab/scvelo/pull/1234\">#1234</a>)"}},{"before":"6a0b63d4b71cff8d494c86a5354380e2adc154a7","after":null,"ref":"refs/heads/gh-readonly-queue/main/pr-1233-b2f31b345641efdccd39fbcb8c0beaa0014b4b88","pushedAt":"2024-04-12T15:35:05.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"github-merge-queue[bot]","name":null,"path":"/apps/github-merge-queue","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/9919?s=80&v=4"}},{"before":"b2f31b345641efdccd39fbcb8c0beaa0014b4b88","after":"6a0b63d4b71cff8d494c86a5354380e2adc154a7","ref":"refs/heads/main","pushedAt":"2024-04-12T15:35:04.000Z","pushType":"merge_queue_merge","commitsCount":1,"pusher":{"login":"github-merge-queue[bot]","name":null,"path":"/apps/github-merge-queue","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/9919?s=80&v=4"},"commit":{"message":"Fix neighbors calculation (#1233)\n\n* Update Scanpy neighbor computation\n\nRemove redundant argument.\n\n* Update neighbor unit tests\n\nUpdate according to latest API changes in scvelo and scanpy.\n\n* Add deprecation warnings\n\nAdd warning that neighbors and PCA will not be calculated automatically\nin the future.\n\n* Update ground truth data\n\n* Update unit tests to latest changes\n\n* Update assertion accuracy","shortMessageHtmlLink":"Fix neighbors calculation (<a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2239595816\" data-permission-text=\"Title is private\" data-url=\"https://github.com/theislab/scvelo/issues/1233\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/theislab/scvelo/pull/1233/hovercard\" href=\"https://github.com/theislab/scvelo/pull/1233\">#1233</a>)"}},{"before":null,"after":"6a0b63d4b71cff8d494c86a5354380e2adc154a7","ref":"refs/heads/gh-readonly-queue/main/pr-1233-b2f31b345641efdccd39fbcb8c0beaa0014b4b88","pushedAt":"2024-04-12T15:35:04.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"github-merge-queue[bot]","name":null,"path":"/apps/github-merge-queue","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/9919?s=80&v=4"},"commit":{"message":"Fix neighbors calculation (#1233)\n\n* Update Scanpy neighbor computation\n\nRemove redundant argument.\n\n* Update neighbor unit tests\n\nUpdate according to latest API changes in scvelo and scanpy.\n\n* Add deprecation warnings\n\nAdd warning that neighbors and PCA will not be calculated automatically\nin the future.\n\n* Update ground truth data\n\n* Update unit tests to latest changes\n\n* Update assertion accuracy","shortMessageHtmlLink":"Fix neighbors calculation (<a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2239595816\" data-permission-text=\"Title is private\" data-url=\"https://github.com/theislab/scvelo/issues/1233\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/theislab/scvelo/pull/1233/hovercard\" href=\"https://github.com/theislab/scvelo/pull/1233\">#1233</a>)"}},{"before":"e81e5f291c06601d42da53f88fa0483f12df0fcf","after":null,"ref":"refs/tags/v0.3.2","pushedAt":"2024-03-17T19:24:03.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"WeilerP","name":"Philipp Weiler","path":"/WeilerP","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28675704?s=80&v=4"}},{"before":"e81e5f291c06601d42da53f88fa0483f12df0fcf","after":"b2f31b345641efdccd39fbcb8c0beaa0014b4b88","ref":"refs/heads/main","pushedAt":"2024-03-17T19:21:16.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"WeilerP","name":"Philipp Weiler","path":"/WeilerP","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28675704?s=80&v=4"},"commit":{"message":"Update `pyproject.toml` (#1226)\n\nFix package directory.","shortMessageHtmlLink":"Update <code>pyproject.toml</code> (<a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2190823922\" data-permission-text=\"Title is private\" data-url=\"https://github.com/theislab/scvelo/issues/1226\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/theislab/scvelo/pull/1226/hovercard\" href=\"https://github.com/theislab/scvelo/pull/1226\">#1226</a>)"}},{"before":"8aba0c957d0505ccecde6c1a4de77580cc2c1ce8","after":"e81e5f291c06601d42da53f88fa0483f12df0fcf","ref":"refs/heads/main","pushedAt":"2024-03-17T19:14:46.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"WeilerP","name":"Philipp Weiler","path":"/WeilerP","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28675704?s=80&v=4"},"commit":{"message":"Update `pyptoject.toml` (#1224)","shortMessageHtmlLink":"Update <code>pyptoject.toml</code> (<a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2190821416\" data-permission-text=\"Title is private\" data-url=\"https://github.com/theislab/scvelo/issues/1224\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/theislab/scvelo/pull/1224/hovercard\" href=\"https://github.com/theislab/scvelo/pull/1224\">#1224</a>)"}},{"before":"30e8cd0dd055a4417d4b8cff288ef2132874f979","after":null,"ref":"refs/tags/v0.3.2","pushedAt":"2024-03-17T19:10:29.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"WeilerP","name":"Philipp Weiler","path":"/WeilerP","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28675704?s=80&v=4"}},{"before":"30e8cd0dd055a4417d4b8cff288ef2132874f979","after":"8aba0c957d0505ccecde6c1a4de77580cc2c1ce8","ref":"refs/heads/main","pushedAt":"2024-03-17T18:59:25.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"WeilerP","name":"Philipp Weiler","path":"/WeilerP","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28675704?s=80&v=4"},"commit":{"message":"Remove `debug.py` (#1222)","shortMessageHtmlLink":"Remove <code>debug.py</code> (<a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2190815418\" data-permission-text=\"Title is private\" data-url=\"https://github.com/theislab/scvelo/issues/1222\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/theislab/scvelo/pull/1222/hovercard\" href=\"https://github.com/theislab/scvelo/pull/1222\">#1222</a>)"}},{"before":"8997c032562c61729e8ef449f65bd73ccf66fd14","after":null,"ref":"refs/tags/v0.3.2","pushedAt":"2024-03-17T18:48:17.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"WeilerP","name":"Philipp Weiler","path":"/WeilerP","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28675704?s=80&v=4"}},{"before":"8997c032562c61729e8ef449f65bd73ccf66fd14","after":"30e8cd0dd055a4417d4b8cff288ef2132874f979","ref":"refs/heads/main","pushedAt":"2024-03-17T18:47:18.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"WeilerP","name":"Philipp Weiler","path":"/WeilerP","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28675704?s=80&v=4"},"commit":{"message":"Update `release.yml` (#1221)","shortMessageHtmlLink":"Update <code>release.yml</code> (<a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2190810904\" data-permission-text=\"Title is private\" data-url=\"https://github.com/theislab/scvelo/issues/1221\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/theislab/scvelo/pull/1221/hovercard\" href=\"https://github.com/theislab/scvelo/pull/1221\">#1221</a>)"}},{"before":"0a5e5c838958cc187b952ee52e71670cd6c63aab","after":"8997c032562c61729e8ef449f65bd73ccf66fd14","ref":"refs/heads/main","pushedAt":"2024-03-17T10:32:23.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"WeilerP","name":"Philipp Weiler","path":"/WeilerP","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28675704?s=80&v=4"},"commit":{"message":"Update `VELOVI::train` (#1219)\n\nRemove argument `use_gpu` and rely on\r\n`accelerator` and `devices`, instead.","shortMessageHtmlLink":"Update <code>VELOVI::train</code> (<a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2190589207\" data-permission-text=\"Title is private\" data-url=\"https://github.com/theislab/scvelo/issues/1219\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/theislab/scvelo/pull/1219/hovercard\" href=\"https://github.com/theislab/scvelo/pull/1219\">#1219</a>)"}},{"before":"ffe2cd3c437fd385f80fed9e6abc6dc3013eff82","after":"0a5e5c838958cc187b952ee52e71670cd6c63aab","ref":"refs/heads/main","pushedAt":"2024-03-17T09:17:51.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"WeilerP","name":"Philipp Weiler","path":"/WeilerP","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28675704?s=80&v=4"},"commit":{"message":"Update `plotting/utils.py::hist` (#1217)\n\nAdd argument `save` to optionally save the\r\nhistogram.","shortMessageHtmlLink":"Update <code>plotting/utils.py::hist</code> (<a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2190555633\" data-permission-text=\"Title is private\" data-url=\"https://github.com/theislab/scvelo/issues/1217\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/theislab/scvelo/pull/1217/hovercard\" href=\"https://github.com/theislab/scvelo/pull/1217\">#1217</a>)"}},{"before":"04f4cc954b98c48ac5e4e5b8bc9a47409c7d97e4","after":"ffe2cd3c437fd385f80fed9e6abc6dc3013eff82","ref":"refs/heads/main","pushedAt":"2024-02-22T09:22:25.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"WeilerP","name":"Philipp Weiler","path":"/WeilerP","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28675704?s=80&v=4"},"commit":{"message":"Update `scatter` and `update_axes` (#1205)\n\nAdd keyword `aspect` to set axis aspect.","shortMessageHtmlLink":"Update <code>scatter</code> and <code>update_axes</code> (<a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2148539412\" data-permission-text=\"Title is private\" data-url=\"https://github.com/theislab/scvelo/issues/1205\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/theislab/scvelo/pull/1205/hovercard\" href=\"https://github.com/theislab/scvelo/pull/1205\">#1205</a>)"}},{"before":"04f4cc954b98c48ac5e4e5b8bc9a47409c7d97e4","after":null,"ref":"refs/heads/gh-readonly-queue/main/pr-1194-3f0a6124f93fd6888684eee736228c1fe3c63982","pushedAt":"2024-02-22T07:34:38.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"github-merge-queue[bot]","name":null,"path":"/apps/github-merge-queue","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/9919?s=80&v=4"}},{"before":"3f0a6124f93fd6888684eee736228c1fe3c63982","after":"04f4cc954b98c48ac5e4e5b8bc9a47409c7d97e4","ref":"refs/heads/main","pushedAt":"2024-02-22T07:34:37.000Z","pushType":"merge_queue_merge","commitsCount":1,"pusher":{"login":"github-merge-queue[bot]","name":null,"path":"/apps/github-merge-queue","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/9919?s=80&v=4"},"commit":{"message":"Unpin scikit-learn (#1194)","shortMessageHtmlLink":"Unpin scikit-learn (<a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2146591098\" data-permission-text=\"Title is private\" data-url=\"https://github.com/theislab/scvelo/issues/1194\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/theislab/scvelo/pull/1194/hovercard\" href=\"https://github.com/theislab/scvelo/pull/1194\">#1194</a>)"}},{"before":null,"after":"04f4cc954b98c48ac5e4e5b8bc9a47409c7d97e4","ref":"refs/heads/gh-readonly-queue/main/pr-1194-3f0a6124f93fd6888684eee736228c1fe3c63982","pushedAt":"2024-02-22T07:34:36.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"github-merge-queue[bot]","name":null,"path":"/apps/github-merge-queue","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/9919?s=80&v=4"},"commit":{"message":"Unpin scikit-learn (#1194)","shortMessageHtmlLink":"Unpin scikit-learn (<a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2146591098\" data-permission-text=\"Title is private\" data-url=\"https://github.com/theislab/scvelo/issues/1194\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/theislab/scvelo/pull/1194/hovercard\" href=\"https://github.com/theislab/scvelo/pull/1194\">#1194</a>)"}},{"before":null,"after":"1a91559a9319fd9ec54a0779fd2839ad289879b9","ref":"refs/heads/Zethson-patch-1","pushedAt":"2024-02-21T12:06:01.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"Zethson","name":"Lukas Heumos","path":"/Zethson","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/21954664?s=80&v=4"},"commit":{"message":"Unpin scikit-learn","shortMessageHtmlLink":"Unpin scikit-learn"}},{"before":"809632e03acc958a5f13d9321981af9c1cd95460","after":"3f0a6124f93fd6888684eee736228c1fe3c63982","ref":"refs/heads/main","pushedAt":"2024-02-14T08:34:55.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"WeilerP","name":"Philipp Weiler","path":"/WeilerP","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28675704?s=80&v=4"},"commit":{"message":"Remove hard `scvi-tools` dependency (#1185)\n\n* Remove hard `scvi-tools` dependency\r\n\r\n* Skip VELOVI tests if `scvi-tools` not installed\r\n\r\n* Remove `torch` dependency\r\n\r\n* Remove unused `skip_file`","shortMessageHtmlLink":"Remove hard <code>scvi-tools</code> dependency (<a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2123911084\" data-permission-text=\"Title is private\" data-url=\"https://github.com/theislab/scvelo/issues/1185\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/theislab/scvelo/pull/1185/hovercard\" href=\"https://github.com/theislab/scvelo/pull/1185\">#1185</a>)"}},{"before":"809632e03acc958a5f13d9321981af9c1cd95460","after":null,"ref":"refs/heads/gh-readonly-queue/main/pr-1166-d9160993a3b434c9768d5716d3c02c01b8c93605","pushedAt":"2023-12-03T11:20:26.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"github-merge-queue[bot]","name":null,"path":"/apps/github-merge-queue","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/9919?s=80&v=4"}},{"before":"d9160993a3b434c9768d5716d3c02c01b8c93605","after":"809632e03acc958a5f13d9321981af9c1cd95460","ref":"refs/heads/main","pushedAt":"2023-12-03T11:20:26.000Z","pushType":"merge_queue_merge","commitsCount":1,"pusher":{"login":"github-merge-queue[bot]","name":null,"path":"/apps/github-merge-queue","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/9919?s=80&v=4"},"commit":{"message":"Update `pyproject.toml` (#1166)\n\nUpdate version number.","shortMessageHtmlLink":"Update <code>pyproject.toml</code> (<a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2022475368\" data-permission-text=\"Title is private\" data-url=\"https://github.com/theislab/scvelo/issues/1166\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/theislab/scvelo/pull/1166/hovercard\" href=\"https://github.com/theislab/scvelo/pull/1166\">#1166</a>)"}},{"before":null,"after":"809632e03acc958a5f13d9321981af9c1cd95460","ref":"refs/heads/gh-readonly-queue/main/pr-1166-d9160993a3b434c9768d5716d3c02c01b8c93605","pushedAt":"2023-12-03T11:20:26.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"github-merge-queue[bot]","name":null,"path":"/apps/github-merge-queue","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/9919?s=80&v=4"},"commit":{"message":"Update `pyproject.toml` (#1166)\n\nUpdate version number.","shortMessageHtmlLink":"Update <code>pyproject.toml</code> (<a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2022475368\" data-permission-text=\"Title is private\" data-url=\"https://github.com/theislab/scvelo/issues/1166\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/theislab/scvelo/pull/1166/hovercard\" href=\"https://github.com/theislab/scvelo/pull/1166\">#1166</a>)"}},{"before":"d9160993a3b434c9768d5716d3c02c01b8c93605","after":null,"ref":"refs/tags/v0.3.1","pushedAt":"2023-12-03T11:17:13.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"WeilerP","name":"Philipp Weiler","path":"/WeilerP","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28675704?s=80&v=4"}},{"before":"d9160993a3b434c9768d5716d3c02c01b8c93605","after":null,"ref":"refs/heads/gh-readonly-queue/main/pr-1162-5132328a4796702ad0cc03d3f068979e88bc8440","pushedAt":"2023-12-02T22:51:51.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"github-merge-queue[bot]","name":null,"path":"/apps/github-merge-queue","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/9919?s=80&v=4"}},{"before":"5132328a4796702ad0cc03d3f068979e88bc8440","after":"d9160993a3b434c9768d5716d3c02c01b8c93605","ref":"refs/heads/main","pushedAt":"2023-12-02T22:51:50.000Z","pushType":"merge_queue_merge","commitsCount":1,"pusher":{"login":"github-merge-queue[bot]","name":null,"path":"/apps/github-merge-queue","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/9919?s=80&v=4"},"commit":{"message":"Update `velocity_graph.py` (#1162)\n\nRemove `transOffset` when defining LineCollection of edges to draw.","shortMessageHtmlLink":"Update <code>velocity_graph.py</code> (<a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2022240544\" data-permission-text=\"Title is private\" data-url=\"https://github.com/theislab/scvelo/issues/1162\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/theislab/scvelo/pull/1162/hovercard\" href=\"https://github.com/theislab/scvelo/pull/1162\">#1162</a>)"}},{"before":null,"after":"d9160993a3b434c9768d5716d3c02c01b8c93605","ref":"refs/heads/gh-readonly-queue/main/pr-1162-5132328a4796702ad0cc03d3f068979e88bc8440","pushedAt":"2023-12-02T22:51:50.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"github-merge-queue[bot]","name":null,"path":"/apps/github-merge-queue","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/9919?s=80&v=4"},"commit":{"message":"Update `velocity_graph.py` (#1162)\n\nRemove `transOffset` when defining LineCollection of edges to draw.","shortMessageHtmlLink":"Update <code>velocity_graph.py</code> (<a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2022240544\" data-permission-text=\"Title is private\" data-url=\"https://github.com/theislab/scvelo/issues/1162\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/theislab/scvelo/pull/1162/hovercard\" href=\"https://github.com/theislab/scvelo/pull/1162\">#1162</a>)"}},{"before":"5132328a4796702ad0cc03d3f068979e88bc8440","after":null,"ref":"refs/tags/v0.3.0","pushedAt":"2023-12-02T20:43:01.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"WeilerP","name":"Philipp Weiler","path":"/WeilerP","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28675704?s=80&v=4"}},{"before":"632c60b1d02eb91899d6e14251b5253514b59654","after":"5132328a4796702ad0cc03d3f068979e88bc8440","ref":"refs/heads/main","pushedAt":"2023-12-02T18:31:17.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"WeilerP","name":"Philipp Weiler","path":"/WeilerP","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28675704?s=80&v=4"},"commit":{"message":"Update docs (#1161)\n\n* Update docstrings\r\n\r\n* Update `README.md`\r\n\r\n* Update `api.rst`\r\n\r\nAdds VELOVI and metabolic labeling inference.\r\n\r\n* Update `installation.rst`\r\n\r\n* Update `index.rst`","shortMessageHtmlLink":"Update docs (<a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2022149066\" data-permission-text=\"Title is private\" data-url=\"https://github.com/theislab/scvelo/issues/1161\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/theislab/scvelo/pull/1161/hovercard\" href=\"https://github.com/theislab/scvelo/pull/1161\">#1161</a>)"}},{"before":"d23edc80ce295ece8ac379cba52fa57717d1690f","after":"632c60b1d02eb91899d6e14251b5253514b59654","ref":"refs/heads/main","pushedAt":"2023-12-02T11:33:26.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"WeilerP","name":"Philipp Weiler","path":"/WeilerP","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28675704?s=80&v=4"},"commit":{"message":"Fix/unit tests (#1159)\n\n* Update `TestCleanup::test_cleanup_all`\r\n\r\nReplace hypothesis-based testing with Pytest's parametrize. Instead of\r\nloading randomly generated AnnData objects, versions of the pancreas and\r\ndentate gyrus are used.\r\n\r\n* Update `test_datasets.py`\r\n\r\nUpdate Python version for which dataset download is tests.\r\n\r\n* Update `TestCleanup`\r\n\r\nIncrease deadling for `test_cleanup_default_clean_w_random_adata`.","shortMessageHtmlLink":"Fix/unit tests (<a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2021991533\" data-permission-text=\"Title is private\" data-url=\"https://github.com/theislab/scvelo/issues/1159\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/theislab/scvelo/pull/1159/hovercard\" href=\"https://github.com/theislab/scvelo/pull/1159\">#1159</a>)"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEL0uBFAA","startCursor":null,"endCursor":null}},"title":"Activity · theislab/scvelo"}