Skip to content

Releases: snakemake/snakemake

v8.6.0

11 Mar 21:07
11e1394
Compare
Choose a tag to compare

8.6.0 (2024-03-11)

Features

  • add setting for defining separate local storage prefix for remote jobs; improved ergonomics for semantic helper functions (#2743) (5007e5c)
  • allow passing of lists of functions or single functions to expand (#2741) (32e65df)

Bug Fixes

  • fix error message for invalid storage provider queries (977951e)
  • fix premature deletion of temp files in combination with checkpoints (#2737) (b22ba5f)

v8.5.5

07 Mar 15:48
e0a6be4
Compare
Choose a tag to compare

8.5.5 (2024-03-07)

Bug Fixes

  • less frightering message when telling about missing output files as reason for running a job (7b6c9d4)

v8.5.4

06 Mar 14:16
dfd76c3
Compare
Choose a tag to compare

8.5.4 (2024-03-06)

Bug Fixes

  • fix bugs in --summary and --list-input-changes. Removed outdated statement in tutorial. (#2735) (55c06d8)

Documentation

  • fix explanation on how to use all cores in tutorial (#2733) (6420428)
  • fix syntax highlighting in tutorial (2887604)

v8.5.3

26 Feb 13:24
b6b16a7
Compare
Choose a tag to compare

8.5.3 (2024-02-26)

Bug Fixes

  • error when detecting mime type during report creation (#2721) (42dad42)

v8.5.2

24 Feb 11:00
968a872
Compare
Choose a tag to compare

8.5.2 (2024-02-24)

Bug Fixes

  • when using remote storage: only wait for files if job did not error (8c7ee91)

Documentation

v8.5.1

24 Feb 09:29
85db296
Compare
Choose a tag to compare

8.5.1 (2024-02-24)

Documentation

v8.5.0

24 Feb 09:13
5a0dbce
Compare
Choose a tag to compare

8.5.0 (2024-02-24)

Features

  • add ability to return input functions from input functions. Such nesting is evaluated 10 times at most. Beyond that, an error is thrown. (#2717) (7a47924)
  • support for report plugins (#2700) (2f7d4b5)

Bug Fixes

  • fix wait for files in case of using remote storage and remote execution (#2718) (eec3a5f)
  • proper interpretation of standard resources given as strings (e.g. runtime as '5m'). Avoid the need to set additional quotes around size or timespan resources. Improved error messages for resource handling. (#2716) (b6636e9)

v8.4.12

20 Feb 15:48
0c9f681
Compare
Choose a tag to compare

8.4.12 (2024-02-20)

Bug Fixes

  • constrain dependencies to match conda experience (#2710) (d9a7a13)
  • various bug fixes for resource parsing (#2711) (d1daf0b)

v8.4.11

19 Feb 14:44
476ae37
Compare
Choose a tag to compare

8.4.11 (2024-02-19)

Documentation

v8.4.10

19 Feb 13:54
526655e
Compare
Choose a tag to compare

8.4.10 (2024-02-19)

Bug Fixes

  • properly handle --touch when using a storage provider (#2705) (fca138d)