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Changelog

0.10.0 (2024-04-24)

Features

  • add method to obtain schemas from workflow repo (#60) (2834e39)

Bug Fixes

0.9.1 (2023-10-30)

Bug Fixes

0.9.0 (2023-10-30)

Features

  • add PR creation to pin-conda-envs (58ce050)

Bug Fixes

  • convert filepath to str (4ba5cbc)

0.8.6 (2023-02-06)

Bug Fixes

  • remove accidental debugger invocation (0e8df29)

0.8.5 (2023-02-03)

Bug Fixes

  • use conda package version parsing by obtaining conda version spec from github (#52) (ed821c8)

0.8.4 (2023-02-01)

Bug Fixes

  • add debugging code for conda env update subcommand (#50) (0ba8e30)

0.8.3 (2023-01-30)

Bug Fixes

  • better error handling when parsing package versions (#47) (d20ff11)

0.8.2 (2022-10-27)

Bug Fixes

  • shuffle conda envs before updating (this ensures that running this in a fallible github action cron job still leads to updating all envs from time to time) (#46) (c6dad58)
  • various robustness improvements for conda env update mechanism (#44) (491c390)

0.8.1 (2022-10-12)

Bug Fixes

  • if nothing to commit, do not create PR (#42) (84bb903)

0.8.0 (2022-10-12)

Features

  • only update pinning if env was updated; ability to specify a regex for entity determination and adding labels when creating PRs from updated envs (#40) (f074e35)

0.7.2 (2022-10-12)

Bug Fixes

  • various bug fixes in conda env update process (#38) (2fde118)

0.7.1 (2022-10-12)

Bug Fixes

  • glob conda env files passed to related subcommands (#36) (c72d401)

0.7.0 (2022-10-11)

Features

  • if requested, automatically generate pull requests when updating conda envs (#34) (a0e978a)

0.6.0 (2022-08-15)

Features

  • add subcommand for updating snakemake wrappers in given Snakefiles (#32) (d291113)

0.5.0 (2022-06-22)

Features

  • support for deploying workflows from Gitlab (#27) (47fc31b)

0.4.0 (2022-05-18)

Features

  • add subcommands to update and pin given conda environment definition files (#29) (9058377)

0.3.0 (2021-12-01)

Features

  • ability to either define branch or tag when deploying (8a079f0)
  • require either --branch or --tag to be specified (d0ae54b)

Bug Fixes

  • remove quotes around snakefile statement (ad7feaf)

0.2.1 (2021-11-08)

Bug Fixes

  • minor rephrasing of CLI help. (4939d9c)