{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":348419208,"defaultBranch":"main","name":"linkml","ownerLogin":"linkml","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2021-03-16T16:34:43.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/79337873?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1717796553.0","currentOid":""},"activityList":{"items":[{"before":"b29613d36e62214e8ff0565a6dcd8bc1e5d9eca1","after":null,"ref":"refs/heads/implement_equals_string","pushedAt":"2024-06-07T21:42:33.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"sujaypatil96","name":"Sujay Patil","path":"/sujaypatil96","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/20239224?s=80&v=4"}},{"before":"4338067e2e8089f1ca064256048d4b4331129e42","after":"58c4c187f6f8abd4a88656a26763dc1e48e26b44","ref":"refs/heads/gh-pages","pushedAt":"2024-06-07T21:12:25.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"Deploying to gh-pages from @ linkml/linkml@124011ca941b119b9d60a137fcc46e1b295e4718 πŸš€","shortMessageHtmlLink":"Deploying to gh-pages from @ 124011c πŸš€"}},{"before":"22e4df36eea674c30d74857029f52379151f3b34","after":"124011ca941b119b9d60a137fcc46e1b295e4718","ref":"refs/heads/main","pushedAt":"2024-06-07T21:10:07.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"cmungall","name":"Chris Mungall","path":"/cmungall","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/50745?s=80&v=4"},"commit":{"message":"Implement equals_string and equals_string_in; take 2 (#2150)\n\n* Implement equals_string and equals_string_in\r\n\r\n* Remove renamingΒ§\r\n\r\n* Add validation rules\r\n\r\n* Add validation for equals_string and equals_string_in in schema loader\r\n\r\n* Revert renaming\r\n\r\n* Remove obsolete code\r\n\r\n* Remove obsolete code\r\n\r\n* Fix codespell errors\r\n\r\n* Resolve flake errors\r\n\r\n* Reforamt files\r\n\r\n* Fix lint errors\r\n\r\n* fix lint errors\r\n\r\n* Add unit tests for equals_string and equals_string_in\r\n\r\n* Make quality checks happy (#2136)\r\n\r\n* Update poetry lockfile\r\n\r\n* hotwo on deprecation\r\n\r\n* `shaclgen`: Add `--include-annotations` option to let annotations be part of shacl shapes (#2111)\r\n\r\n* Add --include-annotations option for shaclgen\r\n\r\nThis is for the SHACL generator in response to https://github.com/linkml/linkml/issues/1618.\r\nCode is added to shaclgen.py to:\r\n- allow users to specify the --include-annotations tag if they\r\nwant annotations (on classes, slots, and types) to be included\r\nin the exported SHACL shapes\r\n- determine the datatype of both annotation tag and value (a\r\nCURIE is identified by searching for the ':' character)\r\n- add the correct triples to the shacl output (to a nodeshape\r\nfor classes, and to a property shape for slots and slots with typesas ranges)\r\n\r\n* fix linting\r\n\r\n* Update snapshot data in 'test_scripts' after updating kitchen sink schema for shaclgen annotation tests\r\n\r\n* Update shaclgen.py\r\n\r\nAdd a TODO comment\r\n\r\n---------\r\n\r\nCo-authored-by: Chris Mungall \r\n\r\n* Erdiagram include upstream (#2139)\r\n\r\n* Include upstream classes into ERD diagram of selected entitites\r\n\r\nAdd docs for β€”include-upstream\r\n\r\n* Fix unit test for Py3.9\r\n\r\n* Update poetry lockfile\r\n\r\n* Implement equals_string and equals_string_in\r\n\r\n* Resolve flake errors\r\n\r\n* fix lint errors\r\n\r\n* Fix tests for equals_string_in feature\r\n\r\nSigned-off-by: Vincent Kelleher \r\n\r\n* Fix gen shacl test\r\n\r\n* Fix unit tests\r\n\r\n* Reformat code\r\n\r\n* Fix missing type\r\n\r\n* Reformt\r\n\r\n* Fix lint errors\r\n\r\n* Fix lint errors\r\n\r\n* Fix unti tests\r\n\r\n* Format imports; ensure that tox and pre-commit agree on a ruff version\r\n\r\n---------\r\n\r\nSigned-off-by: Vincent Kelleher \r\nCo-authored-by: Anja Strunk \r\nCo-authored-by: Vlad Korolev \r\nCo-authored-by: cmungall <50745+cmungall@users.noreply.github.com>\r\nCo-authored-by: Sierra Taylor Moxon \r\nCo-authored-by: Stephan Heunis \r\nCo-authored-by: Chris Mungall \r\nCo-authored-by: Vincent Kelleher \r\nCo-authored-by: anjastrunk <119566837+anjastrunk@users.noreply.github.com>","shortMessageHtmlLink":"Implement equals_string and equals_string_in; take 2 (#2150)"}},{"before":null,"after":"b29613d36e62214e8ff0565a6dcd8bc1e5d9eca1","ref":"refs/heads/implement_equals_string","pushedAt":"2024-06-07T20:28:24.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"pkalita-lbl","name":"Patrick Kalita","path":"/pkalita-lbl","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/102547565?s=80&v=4"},"commit":{"message":"Format imports; ensure that tox and pre-commit agree on a ruff version","shortMessageHtmlLink":"Format imports; ensure that tox and pre-commit agree on a ruff version"}},{"before":"8dcfd1be3d60c622bbb43bc241178430bbc8d954","after":"4338067e2e8089f1ca064256048d4b4331129e42","ref":"refs/heads/gh-pages","pushedAt":"2024-06-06T02:34:40.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"Deploying to gh-pages from @ linkml/linkml@22e4df36eea674c30d74857029f52379151f3b34 πŸš€","shortMessageHtmlLink":"Deploying to gh-pages from @ 22e4df3 πŸš€"}},{"before":"e8f83ddb4353f6efb206f56181cd8e394e8936f8","after":"22e4df36eea674c30d74857029f52379151f3b34","ref":"refs/heads/main","pushedAt":"2024-06-06T02:32:23.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"cmungall","name":"Chris Mungall","path":"/cmungall","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/50745?s=80&v=4"},"commit":{"message":"Adding tests for min/max as floats. (#2145)\n\n* Adding tests for min/max as floats.\r\n\r\nSee https://github.com/orgs/linkml/discussions/2144\r\n\r\n* lint\r\n\r\n* pydantic-v1 exception\r\n\r\n* using new ruff","shortMessageHtmlLink":"Adding tests for min/max as floats. (#2145)"}},{"before":"e2adc389ae4f048c0f2cf1592bfacf5fc48bbf59","after":"7bc5cc3db613e1ae2e88a7fb0d32835b4cd1ad39","ref":"refs/heads/discussion-2144","pushedAt":"2024-06-06T02:11:11.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cmungall","name":"Chris Mungall","path":"/cmungall","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/50745?s=80&v=4"},"commit":{"message":"using new ruff","shortMessageHtmlLink":"using new ruff"}},{"before":"9e46ef91e4361583e9f0cbc78cd9dc834c9153aa","after":"e2adc389ae4f048c0f2cf1592bfacf5fc48bbf59","ref":"refs/heads/discussion-2144","pushedAt":"2024-06-06T00:20:40.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cmungall","name":"Chris Mungall","path":"/cmungall","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/50745?s=80&v=4"},"commit":{"message":"pydantic-v1 exception","shortMessageHtmlLink":"pydantic-v1 exception"}},{"before":"289ea68d0201cc1588ce43754b395a436842fd38","after":"9e46ef91e4361583e9f0cbc78cd9dc834c9153aa","ref":"refs/heads/discussion-2144","pushedAt":"2024-06-05T03:00:27.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cmungall","name":"Chris Mungall","path":"/cmungall","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/50745?s=80&v=4"},"commit":{"message":"lint","shortMessageHtmlLink":"lint"}},{"before":null,"after":"289ea68d0201cc1588ce43754b395a436842fd38","ref":"refs/heads/discussion-2144","pushedAt":"2024-06-05T02:57:12.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"cmungall","name":"Chris Mungall","path":"/cmungall","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/50745?s=80&v=4"},"commit":{"message":"Adding tests for min/max as floats.\n\nSee https://github.com/orgs/linkml/discussions/2144","shortMessageHtmlLink":"Adding tests for min/max as floats."}},{"before":"c41f4ebb6cc4b8c08893cb97ba2424c5ef2a8d14","after":"8dcfd1be3d60c622bbb43bc241178430bbc8d954","ref":"refs/heads/gh-pages","pushedAt":"2024-06-03T15:44:30.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"Deploying to gh-pages from @ linkml/linkml@e8f83ddb4353f6efb206f56181cd8e394e8936f8 πŸš€","shortMessageHtmlLink":"Deploying to gh-pages from @ e8f83dd πŸš€"}},{"before":"6572a8b19eb2e7677fc8159f9f46448155d901cf","after":null,"ref":"refs/heads/update-lockfile","pushedAt":"2024-06-03T15:42:17.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"pkalita-lbl","name":"Patrick Kalita","path":"/pkalita-lbl","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/102547565?s=80&v=4"}},{"before":"220ae4cd668a96b72dd25c052af0da7b28eba380","after":"e8f83ddb4353f6efb206f56181cd8e394e8936f8","ref":"refs/heads/main","pushedAt":"2024-06-03T15:42:13.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"pkalita-lbl","name":"Patrick Kalita","path":"/pkalita-lbl","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/102547565?s=80&v=4"},"commit":{"message":"Merge pull request #2143 from linkml/update-lockfile\n\n[poetry] Update Lockfile","shortMessageHtmlLink":"Merge pull request #2143 from linkml/update-lockfile"}},{"before":"0c76b3fb2441241e463875c7a1e86942df18bc56","after":"6572a8b19eb2e7677fc8159f9f46448155d901cf","ref":"refs/heads/update-lockfile","pushedAt":"2024-06-03T00:42:03.000Z","pushType":"push","commitsCount":8,"pusher":{"login":"linkml-pr-bot[bot]","name":null,"path":"/apps/linkml-pr-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/79337873?s=80&v=4"},"commit":{"message":"Update poetry lockfile","shortMessageHtmlLink":"Update poetry lockfile"}},{"before":"596d233e5dd862119d90b4ce3762d90506cdb78b","after":"c41f4ebb6cc4b8c08893cb97ba2424c5ef2a8d14","ref":"refs/heads/gh-pages","pushedAt":"2024-05-29T10:42:17.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"Deploying to gh-pages from @ linkml/linkml@220ae4cd668a96b72dd25c052af0da7b28eba380 πŸš€","shortMessageHtmlLink":"Deploying to gh-pages from @ 220ae4c πŸš€"}},{"before":"bb37c61bf0aaba0826e1d6471503e162d0f3b809","after":"596d233e5dd862119d90b4ce3762d90506cdb78b","ref":"refs/heads/gh-pages","pushedAt":"2024-05-29T10:41:47.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"Deploying to gh-pages from @ linkml/linkml@f9af01d3e6602cb76fe344edf6e4850cf7dbe7a0 πŸš€","shortMessageHtmlLink":"Deploying to gh-pages from @ f9af01d πŸš€"}},{"before":"f9af01d3e6602cb76fe344edf6e4850cf7dbe7a0","after":"220ae4cd668a96b72dd25c052af0da7b28eba380","ref":"refs/heads/main","pushedAt":"2024-05-29T10:39:53.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"cmungall","name":"Chris Mungall","path":"/cmungall","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/50745?s=80&v=4"},"commit":{"message":"Erdiagram include upstream (#2139)\n\n* Include upstream classes into ERD diagram of selected entitites\r\n\r\nAdd docs for β€”include-upstream\r\n\r\n* Fix unit test for Py3.9","shortMessageHtmlLink":"Erdiagram include upstream (#2139)"}},{"before":"02b585dd0da83749e8f9f603b77dae64914e6fab","after":"f9af01d3e6602cb76fe344edf6e4850cf7dbe7a0","ref":"refs/heads/main","pushedAt":"2024-05-29T10:39:26.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"cmungall","name":"Chris Mungall","path":"/cmungall","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/50745?s=80&v=4"},"commit":{"message":"`shaclgen`: Add `--include-annotations` option to let annotations be part of shacl shapes (#2111)\n\n* Add --include-annotations option for shaclgen\r\n\r\nThis is for the SHACL generator in response to https://github.com/linkml/linkml/issues/1618.\r\nCode is added to shaclgen.py to:\r\n- allow users to specify the --include-annotations tag if they\r\nwant annotations (on classes, slots, and types) to be included\r\nin the exported SHACL shapes\r\n- determine the datatype of both annotation tag and value (a\r\nCURIE is identified by searching for the ':' character)\r\n- add the correct triples to the shacl output (to a nodeshape\r\nfor classes, and to a property shape for slots and slots with typesas ranges)\r\n\r\n* fix linting\r\n\r\n* Update snapshot data in 'test_scripts' after updating kitchen sink schema for shaclgen annotation tests\r\n\r\n* Update shaclgen.py\r\n\r\nAdd a TODO comment\r\n\r\n---------\r\n\r\nCo-authored-by: Chris Mungall ","shortMessageHtmlLink":"shaclgen: Add --include-annotations option to let annotations be …"}},{"before":"262db0f3f9dc96c3fc701c78e924c2a09968cedd","after":"bb37c61bf0aaba0826e1d6471503e162d0f3b809","ref":"refs/heads/gh-pages","pushedAt":"2024-05-28T23:42:15.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"Deploying to gh-pages from @ linkml/linkml@02b585dd0da83749e8f9f603b77dae64914e6fab πŸš€","shortMessageHtmlLink":"Deploying to gh-pages from @ 02b585d πŸš€"}},{"before":"7c9c7568e33d1b24bed375df1f79786f951fb976","after":"02b585dd0da83749e8f9f603b77dae64914e6fab","ref":"refs/heads/main","pushedAt":"2024-05-28T23:39:55.000Z","pushType":"pr_merge","commitsCount":4,"pusher":{"login":"sierra-moxon","name":"Sierra Moxon","path":"/sierra-moxon","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4561292?s=80&v=4"},"commit":{"message":"Merge pull request #2127 from linkml/1771_add_deprecation_docs\n\nhotwo on deprecation","shortMessageHtmlLink":"Merge pull request #2127 from linkml/1771_add_deprecation_docs"}},{"before":"4bbd118b673beaabc946ced377143ec144eb6de4","after":"3dc41b5136de5d48bef6b4c42d84f32000e828f3","ref":"refs/heads/1771_add_deprecation_docs","pushedAt":"2024-05-28T23:16:22.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"sierra-moxon","name":"Sierra Moxon","path":"/sierra-moxon","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4561292?s=80&v=4"},"commit":{"message":"codespell","shortMessageHtmlLink":"codespell"}},{"before":"277c202dbc18ae368fcba1b3321105d12f73cbe7","after":"262db0f3f9dc96c3fc701c78e924c2a09968cedd","ref":"refs/heads/gh-pages","pushedAt":"2024-05-28T15:21:19.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"Deploying to gh-pages from @ linkml/linkml@7c9c7568e33d1b24bed375df1f79786f951fb976 πŸš€","shortMessageHtmlLink":"Deploying to gh-pages from @ 7c9c756 πŸš€"}},{"before":"1f66d5719d2f9dd4a2ad5de1bf05484b6b444b7a","after":"7c9c7568e33d1b24bed375df1f79786f951fb976","ref":"refs/heads/main","pushedAt":"2024-05-28T15:18:48.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"sierra-moxon","name":"Sierra Moxon","path":"/sierra-moxon","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4561292?s=80&v=4"},"commit":{"message":"Merge pull request #2137 from linkml/update-lockfile\n\n[poetry] Update Lockfile","shortMessageHtmlLink":"Merge pull request #2137 from linkml/update-lockfile"}},{"before":null,"after":"0c76b3fb2441241e463875c7a1e86942df18bc56","ref":"refs/heads/update-lockfile","pushedAt":"2024-05-27T00:41:31.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"linkml-pr-bot[bot]","name":null,"path":"/apps/linkml-pr-bot","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/79337873?s=80&v=4"},"commit":{"message":"Update poetry lockfile","shortMessageHtmlLink":"Update poetry lockfile"}},{"before":"549414b1c3d3707b2be5a73392c298fe0daeb394","after":"277c202dbc18ae368fcba1b3321105d12f73cbe7","ref":"refs/heads/gh-pages","pushedAt":"2024-05-26T19:39:45.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"Deploying to gh-pages from @ linkml/linkml@1f66d5719d2f9dd4a2ad5de1bf05484b6b444b7a πŸš€","shortMessageHtmlLink":"Deploying to gh-pages from @ 1f66d57 πŸš€"}},{"before":"db13b572d4b89c0c54db44819c4937c41f29ad8d","after":"1f66d5719d2f9dd4a2ad5de1bf05484b6b444b7a","ref":"refs/heads/main","pushedAt":"2024-05-26T19:37:30.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"cmungall","name":"Chris Mungall","path":"/cmungall","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/50745?s=80&v=4"},"commit":{"message":"Make quality checks happy (#2136)","shortMessageHtmlLink":"Make quality checks happy (#2136)"}},{"before":null,"after":"4bbd118b673beaabc946ced377143ec144eb6de4","ref":"refs/heads/1771_add_deprecation_docs","pushedAt":"2024-05-24T22:13:08.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"sierra-moxon","name":"Sierra Moxon","path":"/sierra-moxon","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4561292?s=80&v=4"},"commit":{"message":"hotwo on deprecation","shortMessageHtmlLink":"hotwo on deprecation"}},{"before":"cfb32db7f1fcb5215dcd48e9f9cfe852cfb74595","after":"549414b1c3d3707b2be5a73392c298fe0daeb394","ref":"refs/heads/gh-pages","pushedAt":"2024-05-20T12:29:38.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"Deploying to gh-pages from @ linkml/linkml@db13b572d4b89c0c54db44819c4937c41f29ad8d πŸš€","shortMessageHtmlLink":"Deploying to gh-pages from @ db13b57 πŸš€"}},{"before":"4a6062c76c0a4cc3a2f50a2824981c2e0a1753a4","after":"cfb32db7f1fcb5215dcd48e9f9cfe852cfb74595","ref":"refs/heads/gh-pages","pushedAt":"2024-05-20T12:28:46.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"Deploying to gh-pages from @ linkml/linkml@890023ec41fd047c15552b8364072af88cd15c95 πŸš€","shortMessageHtmlLink":"Deploying to gh-pages from @ 890023e πŸš€"}},{"before":"fef6b197d44be8b10ead6f86e049623449a6aa57","after":null,"ref":"refs/heads/issue-66","pushedAt":"2024-05-20T12:27:01.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"pkalita-lbl","name":"Patrick Kalita","path":"/pkalita-lbl","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/102547565?s=80&v=4"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEX53GswA","startCursor":null,"endCursor":null}},"title":"Activity Β· linkml/linkml"}