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config.log
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config.log
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This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.
It was created by FastBit configure 2.0.3, which was
generated by GNU Autoconf 2.69. Invocation command line was
$ ./configure
## --------- ##
## Platform. ##
## --------- ##
hostname = Kalyans-MacBook-Pro.local
uname -m = x86_64
uname -r = 16.1.0
uname -s = Darwin
uname -v = Darwin Kernel Version 16.1.0: Thu Oct 13 21:26:57 PDT 2016; root:xnu-3789.21.3~60/RELEASE_X86_64
/usr/bin/uname -p = i386
/bin/uname -X = unknown
/bin/arch = unknown
/usr/bin/arch -k = unknown
/usr/convex/getsysinfo = unknown
/usr/bin/hostinfo = Mach kernel version:
Darwin Kernel Version 16.1.0: Thu Oct 13 21:26:57 PDT 2016; root:xnu-3789.21.3~60/RELEASE_X86_64
Kernel configured for up to 4 processors.
2 processors are physically available.
4 processors are logically available.
Processor type: x86_64h (Intel x86-64h Haswell)
Processors active: 0 1 2 3
Primary memory available: 8.00 gigabytes
Default processor set: 310 tasks, 1612 threads, 4 processors
Load average: 1.90, Mach factor: 2.18
/bin/machine = unknown
/usr/bin/oslevel = unknown
/bin/universe = unknown
PATH: /usr/local/bin
PATH: /usr/bin
PATH: /bin
PATH: /usr/sbin
PATH: /sbin
## ----------- ##
## Core tests. ##
## ----------- ##
configure:2560: checking for a BSD-compatible install
configure:2628: result: /usr/bin/install -c
configure:2639: checking whether build environment is sane
configure:2694: result: yes
configure:2845: checking for a thread-safe mkdir -p
configure:2884: result: ./install-sh -c -d
configure:2891: checking for gawk
configure:2921: result: no
configure:2891: checking for mawk
configure:2921: result: no
configure:2891: checking for nawk
configure:2921: result: no
configure:2891: checking for awk
configure:2907: found /usr/bin/awk
configure:2918: result: awk
configure:2929: checking whether make sets $(MAKE)
configure:2951: result: yes
configure:2980: checking whether make supports nested variables
configure:2997: result: yes
configure:3115: checking whether to enable maintainer-specific portions of Makefiles
configure:3124: result: no
configure:3190: checking for gcc
configure:3206: found /usr/bin/gcc
configure:3217: result: gcc
configure:3446: checking for C compiler version
configure:3455: gcc --version >&5
Apple LLVM version 8.0.0 (clang-800.0.42.1)
Target: x86_64-apple-darwin16.1.0
Thread model: posix
InstalledDir: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin
Configured with: --prefix=/Applications/Xcode.app/Contents/Developer/usr --with-gxx-include-dir=/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.12.sdk/usr/include/c++/4.2.1
configure:3466: $? = 0
configure:3455: gcc -v >&5
Configured with: --prefix=/Applications/Xcode.app/Contents/Developer/usr --with-gxx-include-dir=/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.12.sdk/usr/include/c++/4.2.1
Apple LLVM version 8.0.0 (clang-800.0.42.1)
Target: x86_64-apple-darwin16.1.0
Thread model: posix
InstalledDir: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin
configure:3466: $? = 0
configure:3455: gcc -V >&5
clang: error: argument to '-V' is missing (expected 1 value)
clang: error: no input files
configure:3466: $? = 1
configure:3455: gcc -qversion >&5
clang: error: unknown argument: '-qversion'
clang: error: no input files
configure:3466: $? = 1
configure:3486: checking whether the C compiler works
configure:3508: gcc conftest.c >&5
configure:3512: $? = 0
configure:3560: result: yes
configure:3563: checking for C compiler default output file name
configure:3565: result: a.out
configure:3571: checking for suffix of executables
configure:3578: gcc -o conftest conftest.c >&5
configure:3582: $? = 0
configure:3604: result:
configure:3626: checking whether we are cross compiling
configure:3634: gcc -o conftest conftest.c >&5
configure:3638: $? = 0
configure:3645: ./conftest
configure:3649: $? = 0
configure:3664: result: no
configure:3669: checking for suffix of object files
configure:3691: gcc -c conftest.c >&5
configure:3695: $? = 0
configure:3716: result: o
configure:3720: checking whether we are using the GNU C compiler
configure:3739: gcc -c conftest.c >&5
configure:3739: $? = 0
configure:3748: result: yes
configure:3757: checking whether gcc accepts -g
configure:3777: gcc -c -g conftest.c >&5
configure:3777: $? = 0
configure:3818: result: yes
configure:3835: checking for gcc option to accept ISO C89
configure:3898: gcc -c -g -O2 conftest.c >&5
configure:3898: $? = 0
configure:3911: result: none needed
configure:3936: checking whether gcc understands -c and -o together
configure:3958: gcc -c conftest.c -o conftest2.o
configure:3961: $? = 0
configure:3958: gcc -c conftest.c -o conftest2.o
configure:3961: $? = 0
configure:3973: result: yes
configure:4001: checking for style of include used by make
configure:4029: result: GNU
configure:4055: checking dependency style of gcc
configure:4166: result: gcc3
configure:4239: checking for g++
configure:4255: found /usr/bin/g++
configure:4266: result: g++
configure:4293: checking for C++ compiler version
configure:4302: g++ --version >&5
Apple LLVM version 8.0.0 (clang-800.0.42.1)
Target: x86_64-apple-darwin16.1.0
Thread model: posix
InstalledDir: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin
Configured with: --prefix=/Applications/Xcode.app/Contents/Developer/usr --with-gxx-include-dir=/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.12.sdk/usr/include/c++/4.2.1
configure:4313: $? = 0
configure:4302: g++ -v >&5
Configured with: --prefix=/Applications/Xcode.app/Contents/Developer/usr --with-gxx-include-dir=/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.12.sdk/usr/include/c++/4.2.1
Apple LLVM version 8.0.0 (clang-800.0.42.1)
Target: x86_64-apple-darwin16.1.0
Thread model: posix
InstalledDir: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin
configure:4313: $? = 0
configure:4302: g++ -V >&5
clang: error: argument to '-V' is missing (expected 1 value)
clang: error: no input files
configure:4313: $? = 1
configure:4302: g++ -qversion >&5
clang: error: unknown argument: '-qversion'
clang: error: no input files
configure:4313: $? = 1
configure:4317: checking whether we are using the GNU C++ compiler
configure:4336: g++ -c conftest.cpp >&5
configure:4336: $? = 0
configure:4345: result: yes
configure:4354: checking whether g++ accepts -g
configure:4374: g++ -c -g conftest.cpp >&5
configure:4374: $? = 0
configure:4415: result: yes
configure:4440: checking dependency style of g++
configure:4551: result: gcc3
configure:4567: checking whether make sets $(MAKE)
configure:4589: result: yes
configure:4627: checking build system type
configure:4641: result: i386-apple-darwin16.1.0
configure:4661: checking host system type
configure:4674: result: i386-apple-darwin16.1.0
configure:4715: checking how to print strings
configure:4742: result: printf
configure:4763: checking for a sed that does not truncate output
configure:4827: result: /usr/bin/sed
configure:4845: checking for grep that handles long lines and -e
configure:4903: result: /usr/bin/grep
configure:4908: checking for egrep
configure:4970: result: /usr/bin/grep -E
configure:4975: checking for fgrep
configure:5037: result: /usr/bin/grep -F
configure:5072: checking for ld used by gcc
configure:5139: result: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld
configure:5146: checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld
configure:5161: result: no
configure:5173: checking for BSD- or MS-compatible name lister (nm)
configure:5222: result: /usr/bin/nm -B
configure:5352: checking the name lister (/usr/bin/nm -B) interface
configure:5359: gcc -c -g -O2 conftest.c >&5
configure:5362: /usr/bin/nm -B "conftest.o"
configure:5365: output
0000000000000204 S _some_variable
configure:5372: result: BSD nm
configure:5375: checking whether ln -s works
configure:5379: result: yes
configure:5387: checking the maximum length of command line arguments
configure:5517: result: 196608
configure:5534: checking whether the shell understands some XSI constructs
configure:5544: result: yes
configure:5548: checking whether the shell understands "+="
configure:5554: result: yes
configure:5589: checking how to convert i386-apple-darwin16.1.0 file names to i386-apple-darwin16.1.0 format
configure:5629: result: func_convert_file_noop
configure:5636: checking how to convert i386-apple-darwin16.1.0 file names to toolchain format
configure:5656: result: func_convert_file_noop
configure:5663: checking for /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld option to reload object files
configure:5670: result: -r
configure:5744: checking for objdump
configure:5760: found /usr/bin/objdump
configure:5771: result: objdump
configure:5803: checking how to recognize dependent libraries
configure:6005: result: pass_all
configure:6090: checking for dlltool
configure:6120: result: no
configure:6150: checking how to associate runtime and link libraries
configure:6177: result: printf %s\n
configure:6238: checking for ar
configure:6254: found /usr/bin/ar
configure:6265: result: ar
configure:6302: checking for archiver @FILE support
configure:6319: gcc -c -g -O2 conftest.c >&5
configure:6319: $? = 0
configure:6322: ar cru libconftest.a @conftest.lst >&5
ar: @conftest.lst: No such file or directory
configure:6325: $? = 1
configure:6345: result: no
configure:6403: checking for strip
configure:6419: found /usr/bin/strip
configure:6430: result: strip
configure:6502: checking for ranlib
configure:6518: found /usr/bin/ranlib
configure:6529: result: ranlib
configure:6631: checking command to parse /usr/bin/nm -B output from gcc object
configure:6751: gcc -c -g -O2 conftest.c >&5
configure:6754: $? = 0
configure:6758: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm
configure:6761: $? = 0
cannot find nm_test_var in conftest.nm
configure:6751: gcc -c -g -O2 conftest.c >&5
configure:6754: $? = 0
configure:6758: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*_\([_A-Za-z][_A-Za-z0-9]*\)$/\1 _\2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm
configure:6761: $? = 0
configure:6827: gcc -o conftest -g -O2 conftest.c conftstm.o >&5
warning: (x86_64) could not find object file symbol for symbol _main
configure:6830: $? = 0
configure:6868: result: ok
configure:6905: checking for sysroot
configure:6935: result: no
configure:7191: checking for mt
configure:7221: result: no
configure:7241: checking if : is a manifest tool
configure:7247: : '-?'
configure:7255: result: no
configure:7311: checking for dsymutil
configure:7327: found /usr/bin/dsymutil
configure:7338: result: dsymutil
configure:7403: checking for nmedit
configure:7419: found /usr/bin/nmedit
configure:7430: result: nmedit
configure:7495: checking for lipo
configure:7511: found /usr/bin/lipo
configure:7522: result: lipo
configure:7587: checking for otool
configure:7603: found /usr/bin/otool
configure:7614: result: otool
configure:7679: checking for otool64
configure:7709: result: no
configure:7754: checking for -single_module linker flag
gcc -g -O2 -o libconftest.dylib -dynamiclib -Wl,-single_module conftest.c
configure:7787: result: yes
configure:7790: checking for -exported_symbols_list linker flag
configure:7810: gcc -o conftest -g -O2 -Wl,-exported_symbols_list,conftest.sym conftest.c >&5
configure:7810: $? = 0
configure:7820: result: yes
configure:7823: checking for -force_load linker flag
gcc -g -O2 -c -o conftest.o conftest.c
ar cru libconftest.a conftest.o
ranlib libconftest.a
gcc -g -O2 -o conftest conftest.c -Wl,-force_load,./libconftest.a
configure:7855: result: yes
configure:7897: checking how to run the C preprocessor
configure:7928: gcc -E conftest.c
configure:7928: $? = 0
configure:7942: gcc -E conftest.c
conftest.c:9:10: fatal error: 'ac_nonexistent.h' file not found
#include <ac_nonexistent.h>
^
1 error generated.
configure:7942: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "FastBit"
| #define PACKAGE_TARNAME "fastbit"
| #define PACKAGE_VERSION "2.0.3"
| #define PACKAGE_STRING "FastBit 2.0.3"
| #define PACKAGE_BUGREPORT "fastbit-users@hpcrdm.lbl.gov"
| #define PACKAGE_URL ""
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:7967: result: gcc -E
configure:7987: gcc -E conftest.c
configure:7987: $? = 0
configure:8001: gcc -E conftest.c
conftest.c:9:10: fatal error: 'ac_nonexistent.h' file not found
#include <ac_nonexistent.h>
^
1 error generated.
configure:8001: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "FastBit"
| #define PACKAGE_TARNAME "fastbit"
| #define PACKAGE_VERSION "2.0.3"
| #define PACKAGE_STRING "FastBit 2.0.3"
| #define PACKAGE_BUGREPORT "fastbit-users@hpcrdm.lbl.gov"
| #define PACKAGE_URL ""
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:8030: checking for ANSI C header files
configure:8050: gcc -c -g -O2 conftest.c >&5
configure:8050: $? = 0
configure:8123: gcc -o conftest -g -O2 conftest.c >&5
configure:8123: $? = 0
configure:8123: ./conftest
configure:8123: $? = 0
configure:8134: result: yes
configure:8147: checking for sys/types.h
configure:8147: gcc -c -g -O2 conftest.c >&5
configure:8147: $? = 0
configure:8147: result: yes
configure:8147: checking for sys/stat.h
configure:8147: gcc -c -g -O2 conftest.c >&5
configure:8147: $? = 0
configure:8147: result: yes
configure:8147: checking for stdlib.h
configure:8147: gcc -c -g -O2 conftest.c >&5
configure:8147: $? = 0
configure:8147: result: yes
configure:8147: checking for string.h
configure:8147: gcc -c -g -O2 conftest.c >&5
configure:8147: $? = 0
configure:8147: result: yes
configure:8147: checking for memory.h
configure:8147: gcc -c -g -O2 conftest.c >&5
configure:8147: $? = 0
configure:8147: result: yes
configure:8147: checking for strings.h
configure:8147: gcc -c -g -O2 conftest.c >&5
configure:8147: $? = 0
configure:8147: result: yes
configure:8147: checking for inttypes.h
configure:8147: gcc -c -g -O2 conftest.c >&5
configure:8147: $? = 0
configure:8147: result: yes
configure:8147: checking for stdint.h
configure:8147: gcc -c -g -O2 conftest.c >&5
configure:8147: $? = 0
configure:8147: result: yes
configure:8147: checking for unistd.h
configure:8147: gcc -c -g -O2 conftest.c >&5
configure:8147: $? = 0
configure:8147: result: yes
configure:8161: checking for dlfcn.h
configure:8161: gcc -c -g -O2 conftest.c >&5
configure:8161: $? = 0
configure:8161: result: yes
configure:8378: checking for objdir
configure:8393: result: .libs
configure:8664: checking if gcc supports -fno-rtti -fno-exceptions
configure:8682: gcc -c -g -O2 -fno-rtti -fno-exceptions conftest.c >&5
configure:8686: $? = 0
configure:8699: result: yes
configure:9026: checking for gcc option to produce PIC
configure:9033: result: -fno-common -DPIC
configure:9041: checking if gcc PIC flag -fno-common -DPIC works
configure:9059: gcc -c -g -O2 -fno-common -DPIC -DPIC conftest.c >&5
configure:9063: $? = 0
configure:9076: result: yes
configure:9105: checking if gcc static flag -static works
configure:9133: result: no
configure:9148: checking if gcc supports -c -o file.o
configure:9169: gcc -c -g -O2 -o out/conftest2.o conftest.c >&5
configure:9173: $? = 0
configure:9195: result: yes
configure:9203: checking if gcc supports -c -o file.o
configure:9250: result: yes
configure:9283: checking whether the gcc linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries
configure:10436: result: yes
configure:10676: checking dynamic linker characteristics
configure:11409: result: darwin16.1.0 dyld
configure:11516: checking how to hardcode library paths into programs
configure:11541: result: immediate
configure:12081: checking whether stripping libraries is possible
configure:12095: result: yes
configure:12121: checking if libtool supports shared libraries
configure:12123: result: yes
configure:12126: checking whether to build shared libraries
configure:12147: result: yes
configure:12150: checking whether to build static libraries
configure:12154: result: yes
configure:12177: checking how to run the C++ preprocessor
configure:12204: g++ -E conftest.cpp
configure:12204: $? = 0
configure:12218: g++ -E conftest.cpp
conftest.cpp:21:10: fatal error: 'ac_nonexistent.h' file not found
#include <ac_nonexistent.h>
^
1 error generated.
configure:12218: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "FastBit"
| #define PACKAGE_TARNAME "fastbit"
| #define PACKAGE_VERSION "2.0.3"
| #define PACKAGE_STRING "FastBit 2.0.3"
| #define PACKAGE_BUGREPORT "fastbit-users@hpcrdm.lbl.gov"
| #define PACKAGE_URL ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:12243: result: g++ -E
configure:12263: g++ -E conftest.cpp
configure:12263: $? = 0
configure:12277: g++ -E conftest.cpp
conftest.cpp:21:10: fatal error: 'ac_nonexistent.h' file not found
#include <ac_nonexistent.h>
^
1 error generated.
configure:12277: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "FastBit"
| #define PACKAGE_TARNAME "fastbit"
| #define PACKAGE_VERSION "2.0.3"
| #define PACKAGE_STRING "FastBit 2.0.3"
| #define PACKAGE_BUGREPORT "fastbit-users@hpcrdm.lbl.gov"
| #define PACKAGE_URL ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:12446: checking for ld used by g++
configure:12513: result: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld
configure:12520: checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld
configure:12535: result: no
configure:12590: checking whether the g++ linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries
configure:13595: result: yes
configure:13631: g++ -c -g -O2 conftest.cpp >&5
configure:13634: $? = 0
configure:14154: checking for g++ option to produce PIC
configure:14161: result: -fno-common -DPIC
configure:14169: checking if g++ PIC flag -fno-common -DPIC works
configure:14187: g++ -c -g -O2 -fno-common -DPIC -DPIC conftest.cpp >&5
configure:14191: $? = 0
configure:14204: result: yes
configure:14227: checking if g++ static flag -static works
configure:14255: result: no
configure:14267: checking if g++ supports -c -o file.o
configure:14288: g++ -c -g -O2 -o out/conftest2.o conftest.cpp >&5
configure:14292: $? = 0
configure:14314: result: yes
configure:14319: checking if g++ supports -c -o file.o
configure:14366: result: yes
configure:14396: checking whether the g++ linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries
configure:14432: result: yes
configure:14573: checking dynamic linker characteristics
configure:15240: result: darwin16.1.0 dyld
configure:15293: checking how to hardcode library paths into programs
configure:15318: result: immediate
configure:15388: checking for log10 in -lm
configure:15413: g++ -o conftest -g -O2 conftest.cpp -lm >&5
configure:15413: $? = 0
configure:15422: result: yes
configure:15433: checking for clock_gettime in -lrt
configure:15458: g++ -o conftest -g -O2 conftest.cpp -lrt -lm >&5
ld: library not found for -lrt
clang: error: linker command failed with exit code 1 (use -v to see invocation)
configure:15458: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "FastBit"
| #define PACKAGE_TARNAME "fastbit"
| #define PACKAGE_VERSION "2.0.3"
| #define PACKAGE_STRING "FastBit 2.0.3"
| #define PACKAGE_BUGREPORT "fastbit-users@hpcrdm.lbl.gov"
| #define PACKAGE_URL ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| /* end confdefs.h. */
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char clock_gettime ();
| int
| main ()
| {
| return clock_gettime ();
| ;
| return 0;
| }
configure:15467: result: no
configure:15485: checking for dirent.h that defines DIR
configure:15504: g++ -c -g -O2 conftest.cpp >&5
configure:15504: $? = 0
configure:15512: result: yes
configure:15525: checking for library containing opendir
configure:15556: g++ -o conftest -g -O2 conftest.cpp -lm >&5
configure:15556: $? = 0
configure:15573: result: none required
configure:15644: checking for inttypes.h
configure:15644: result: yes
configure:15644: checking for stdint.h
configure:15644: result: yes
configure:15644: checking for sys/types.h
configure:15644: result: yes
configure:15681: checking for vprintf
configure:15681: g++ -o conftest -g -O2 conftest.cpp -lm >&5
configure:15681: $? = 0
configure:15681: result: yes
configure:15687: checking for _doprnt
configure:15687: g++ -o conftest -g -O2 conftest.cpp -lm >&5
Undefined symbols for architecture x86_64:
"__doprnt", referenced from:
_main in conftest-70c9d1.o
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
configure:15687: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "FastBit"
| #define PACKAGE_TARNAME "fastbit"
| #define PACKAGE_VERSION "2.0.3"
| #define PACKAGE_STRING "FastBit 2.0.3"
| #define PACKAGE_BUGREPORT "fastbit-users@hpcrdm.lbl.gov"
| #define PACKAGE_URL ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_DIRENT_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_VPRINTF 1
| /* end confdefs.h. */
| /* Define _doprnt to an innocuous variant, in case <limits.h> declares _doprnt.
| For example, HP-UX 11i <limits.h> declares gettimeofday. */
| #define _doprnt innocuous__doprnt
|
| /* System header to define __stub macros and hopefully few prototypes,
| which can conflict with char _doprnt (); below.
| Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
| <limits.h> exists even on freestanding compilers. */
|
| #ifdef __STDC__
| # include <limits.h>
| #else
| # include <assert.h>
| #endif
|
| #undef _doprnt
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char _doprnt ();
| /* The GNU C library defines this for functions which it implements
| to always fail with ENOSYS. Some functions are actually named
| something starting with __ and the normal name is an alias. */
| #if defined __stub__doprnt || defined __stub____doprnt
| choke me
| #endif
|
| int
| main ()
| {
| return _doprnt ();
| ;
| return 0;
| }
configure:15687: result: no
configure:15703: checking for gettimeofday
configure:15703: g++ -o conftest -g -O2 conftest.cpp -lm >&5
configure:15703: $? = 0
configure:15703: result: yes
configure:15703: checking for mkdir
configure:15703: g++ -o conftest -g -O2 conftest.cpp -lm >&5
configure:15703: $? = 0
configure:15703: result: yes
configure:15703: checking for flock
configure:15703: g++ -o conftest -g -O2 conftest.cpp -lm >&5
configure:15703: $? = 0
configure:15703: result: yes
configure:15703: checking for strptime
configure:15703: g++ -o conftest -g -O2 conftest.cpp -lm >&5
configure:15703: $? = 0
configure:15703: result: yes
configure:15743: checking whether to enable debugging (-g)
configure:15752: result:
configure:15754: checking whether to enable extra optimization
configure:15763: result: no
configure:15856: checking for unordered_map
configure:15876: g++ -c -g -O2 conftest.cpp >&5
configure:15876: $? = 0
configure:16027: checking for the presence of getpwuid
configure:16052: g++ -o conftest -g -O2 conftest.cpp -lm >&5
configure:16052: $? = 0
configure:16052: ./conftest
configure:16052: $? = 0
configure:16056: result: yes
configure:16066: checking for the presence of getpwuid_r
configure:16095: g++ -o conftest -g -O2 conftest.cpp -lm >&5
configure:16095: $? = 0
configure:16095: ./conftest
configure:16095: $? = 0
configure:16099: result: yes
configure:16121: checking for quiet_NaN
configure:16149: g++ -o conftest -g -O2 conftest.cpp -lm >&5
configure:16149: $? = 0
configure:16149: ./conftest
configure:16149: $? = 0
configure:16150: result: yes, use quiet_NaN() as null values
configure:16371: checking for the pthreads library -lpthreads
configure:16400: gcc -o conftest -g -O2 conftest.c -lpthreads -lm >&5
conftest.c:41:37: warning: null passed to a callee that requires a non-null argument [-Wnonnull]
pthread_attr_init(0); pthread_cleanup_push(0, 0);
~^
conftest.c:42:40: warning: null passed to a callee that requires a non-null argument [-Wnonnull]
pthread_create(0,0,0,0); pthread_cleanup_pop(0);
~ ^
conftest.c:42:40: warning: null passed to a callee that requires a non-null argument [-Wnonnull]
pthread_create(0,0,0,0); pthread_cleanup_pop(0);
~ ^
3 warnings generated.
ld: library not found for -lpthreads
clang: error: linker command failed with exit code 1 (use -v to see invocation)
configure:16400: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "FastBit"
| #define PACKAGE_TARNAME "fastbit"
| #define PACKAGE_VERSION "2.0.3"
| #define PACKAGE_STRING "FastBit 2.0.3"
| #define PACKAGE_BUGREPORT "fastbit-users@hpcrdm.lbl.gov"
| #define PACKAGE_URL ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_DIRENT_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_VPRINTF 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_MKDIR 1
| #define HAVE_FLOCK 1
| #define HAVE_STRPTIME 1
| #define HAVE_UNORDERED_MAP 1
| #define HAVE_GETPWUID 1
| #define HAVE_GETPWUID_R 1
| #define FASTBIT_FLOAT_NULL std::numeric_limits<float>::quiet_NaN()
| #define FASTBIT_DOUBLE_NULL std::numeric_limits<double>::quiet_NaN()
| /* end confdefs.h. */
| #include <pthread.h>
| int
| main ()
| {
| pthread_t th; pthread_join(th, 0);
| pthread_attr_init(0); pthread_cleanup_push(0, 0);
| pthread_create(0,0,0,0); pthread_cleanup_pop(0);
| ;
| return 0;
| }
configure:16409: result: no
configure:16316: checking whether pthreads work without any flags
configure:16400: gcc -o conftest -g -O2 conftest.c -lm >&5
conftest.c:41:37: warning: null passed to a callee that requires a non-null argument [-Wnonnull]
pthread_attr_init(0); pthread_cleanup_push(0, 0);
~^
conftest.c:42:40: warning: null passed to a callee that requires a non-null argument [-Wnonnull]
pthread_create(0,0,0,0); pthread_cleanup_pop(0);
~ ^
conftest.c:42:40: warning: null passed to a callee that requires a non-null argument [-Wnonnull]
pthread_create(0,0,0,0); pthread_cleanup_pop(0);
~ ^
3 warnings generated.
configure:16400: $? = 0
configure:16409: result: yes
configure:16426: checking if more special flags are required for pthreads
configure:16433: result: -D_THREAD_SAFE
configure:16461: checking if math.h defines nextafter
configure:16479: g++ -o conftest -g -O2 conftest.cpp -lm >&5
configure:16479: $? = 0
configure:16481: result: yes
configure:16507: g++ -o conftest -g -O2 conftest.cpp -lm >&5
configure:16507: $? = 0
configure:16517: checking for atomic template
configure:16541: g++ -c -g -O2 conftest.cpp >&5
In file included from conftest.cpp:40:
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../include/c++/v1/atomic:543:2: error: <atomic> is not implemented
#error <atomic> is not implemented
^
conftest.cpp:46:7: error: no member named 'atomic' in namespace 'std'
std::atomic<uint32_t> ai32(0);
~~~~~^
conftest.cpp:46:14: error: unexpected type name 'uint32_t': expected expression
std::atomic<uint32_t> ai32(0);
^
conftest.cpp:46:24: error: use of undeclared identifier 'ai32'
std::atomic<uint32_t> ai32(0);
^
conftest.cpp:47:7: error: no member named 'atomic' in namespace 'std'
std::atomic<uint64_t> ai64(1);
~~~~~^
conftest.cpp:47:14: error: unexpected type name 'uint64_t': expected expression
std::atomic<uint64_t> ai64(1);
^
conftest.cpp:47:24: error: use of undeclared identifier 'ai64'
std::atomic<uint64_t> ai64(1);
^
conftest.cpp:48:2: error: use of undeclared identifier 'ai32'
ai32++;
^
conftest.cpp:49:2: error: use of undeclared identifier 'ai64'
ai64--;
^
conftest.cpp:50:6: error: use of undeclared identifier 'ai32'
if (ai32.load() == 1 && ai64.load() == 0)
^
conftest.cpp:50:26: error: use of undeclared identifier 'ai64'
if (ai32.load() == 1 && ai64.load() == 0)
^
11 errors generated.
configure:16541: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "FastBit"
| #define PACKAGE_TARNAME "fastbit"
| #define PACKAGE_VERSION "2.0.3"
| #define PACKAGE_STRING "FastBit 2.0.3"
| #define PACKAGE_BUGREPORT "fastbit-users@hpcrdm.lbl.gov"
| #define PACKAGE_URL ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_DIRENT_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_VPRINTF 1
| #define HAVE_GETTIMEOFDAY 1
| #define HAVE_MKDIR 1
| #define HAVE_FLOCK 1
| #define HAVE_STRPTIME 1
| #define HAVE_UNORDERED_MAP 1
| #define HAVE_GETPWUID 1
| #define HAVE_GETPWUID_R 1
| #define FASTBIT_FLOAT_NULL std::numeric_limits<float>::quiet_NaN()
| #define FASTBIT_DOUBLE_NULL std::numeric_limits<double>::quiet_NaN()
| #define HAVE_PTHREAD 1
| #define HAVE_NEXTAFTER 1
| #define HAVE_STRTOLL 1
| /* end confdefs.h. */
|
| #include <atomic>
|
| int
| main ()
| {
|
| std::atomic<uint32_t> ai32(0);
| std::atomic<uint64_t> ai64(1);
| ai32++;
| ai64--;
| if (ai32.load() == 1 && ai64.load() == 0)
| return 0;
| else
| return -1;
|
| ;
| return 0;
| }
configure:16574: g++ -c -g -O2 -std=c++11 conftest.cpp >&5
configure:16574: $? = 0
configure:16575: result: yes
configure:16592: checking if compiler supports __sync_add_and_fetch for 32-bit integers
configure:16611: g++ -o conftest -g -O2 -std=c++11 conftest.cpp -lm >&5
configure:16611: $? = 0
configure:16613: result: yes
configure:16662: checking if compiler supports __sync_add_and_fetch for 64-bit integers
configure:16681: g++ -o conftest -g -O2 -std=c++11 conftest.cpp -lm >&5
configure:16681: $? = 0
configure:16683: result: yes
configure:16735: checking whether necessary to undefine __STRICT_ANSI__ for use of popen/pclose
configure:16738: g++ -g -O2 -std=c++11 -D_THREAD_SAFE -DFASTBIT_RMDIR_USE_RM -DWITHOUT_FASTBIT_CONFIG_H -c src/util.cpp
configure:16741: $? = 0
configure:16743: result: no
configure:16766: checking if the default FlexLexer.h defines yywrap
configure:16769: g++ -g -O2 -std=c++11 -D_THREAD_SAFE -DWITHOUT_FASTBIT_CONFIG_H -c src/whereLexer.cc
whereLexer.cc:1037:8: error: member reference type 'std::istream *' (aka 'basic_istream<char> *') is a pointer; did you mean to use '->'?
yyin.rdbuf(std::cin.rdbuf());
~~~~^
->
whereLexer.cc:1040:9: error: member reference type 'std::ostream *' (aka 'basic_ostream<char> *') is a pointer; did you mean to use '->'?
yyout.rdbuf(std::cout.rdbuf());
~~~~~^
->
whereLexer.cc:1507:50: error: member reference type 'std::istream *' (aka 'basic_istream<char> *') is a pointer; did you mean to use '->'?
YY_CURRENT_BUFFER_LVALUE->yy_input_file = yyin.rdbuf();
~~~~^
->
whereLexer.cc:1622:2: error: cannot initialize a member subobject of type 'std::istream *' (aka 'basic_istream<char> *') with an rvalue of type 'basic_streambuf<char_type, traits_type> *' (aka 'basic_streambuf<char, std::__1::char_traits<char> > *')
yyin(arg_yyin ? arg_yyin->rdbuf() : std::cin.rdbuf()),
^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
whereLexer.cc:1623:2: error: cannot initialize a member subobject of type 'std::ostream *' (aka 'basic_ostream<char> *') with an rvalue of type 'basic_streambuf<char_type, traits_type> *' (aka 'basic_streambuf<char, std::__1::char_traits<char> > *')
yyout(arg_yyout ? arg_yyout->rdbuf() : std::cout.rdbuf())
^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
whereLexer.cc:1625:2: error: use of undeclared identifier 'ctor_common'
ctor_common();
^
whereLexer.cc:1630:14: error: out-of-line definition of '_wLexer' does not match any declaration in '_wLexer'
yyFlexLexer::yyFlexLexer( std::istream& arg_yyin, std::ostream& arg_yyout ):
^~~~~~~~~~~
src/whereLexer.h:21:21: note: expanded from macro 'yyFlexLexer'
#define yyFlexLexer _wLexer
^~~~~~~
whereLexer.cc:1621:27: note: type of 1st parameter of member declaration does not match definition ('std::istream *' (aka 'basic_istream<char> *') vs 'std::istream &' (aka 'basic_istream<char> &'))
yyFlexLexer::yyFlexLexer( FLEX_STD istream* arg_yyin, FLEX_STD ostream* arg_yyout ):
^
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/FlexLexer.h:53:22: note: expanded from macro 'FLEX_STD'
# define FLEX_STD std::
^
whereLexer.cc:1631:2: error: cannot initialize a member subobject of type 'std::istream *' (aka 'basic_istream<char> *') with an rvalue of type 'basic_streambuf<char_type, traits_type> *' (aka 'basic_streambuf<char, std::__1::char_traits<char> > *')
yyin(arg_yyin.rdbuf()),
^ ~~~~~~~~~~~~~~~~
whereLexer.cc:1632:2: error: cannot initialize a member subobject of type 'std::ostream *' (aka 'basic_ostream<char> *') with an rvalue of type 'basic_streambuf<char_type, traits_type> *' (aka 'basic_streambuf<char, std::__1::char_traits<char> > *')
yyout(arg_yyout.rdbuf())
^ ~~~~~~~~~~~~~~~~~
whereLexer.cc:1634:2: error: use of undeclared identifier 'ctor_common'
ctor_common();
^
whereLexer.cc:1639:19: error: out-of-line definition of 'ctor_common' does not match any declaration in '_wLexer'
void yyFlexLexer::ctor_common()
^~~~~~~~~~~
whereLexer.cc:1677:19: error: out-of-line definition of 'switch_streams' does not match any declaration in '_wLexer'
void yyFlexLexer::switch_streams( std::istream& new_in, std::ostream& new_out )
^~~~~~~~~~~~~~
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/FlexLexer.h:129:31: note: type of 1st parameter of member declaration does not match definition ('std::istream *' (aka 'basic_istream<char> *') vs 'std::istream &' (aka 'basic_istream<char> &'))
virtual void switch_streams( FLEX_STD istream* new_in, FLEX_STD ostream* new_out = 0 );
^
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/FlexLexer.h:53:22: note: expanded from macro 'FLEX_STD'
# define FLEX_STD std::
^
whereLexer.cc:1681:41: error: no viable conversion from 'std::istream' (aka 'basic_istream<char>') to 'std::istream *' (aka 'basic_istream<char> *')
yy_switch_to_buffer( yy_create_buffer( new_in, YY_BUF_SIZE ) );
^~~~~~
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/FlexLexer.h:121:62: note: passing argument to parameter 's' here
struct yy_buffer_state* yy_create_buffer( FLEX_STD istream* s, int size );
^
whereLexer.cc:1684:7: error: member reference type 'std::ostream *' (aka 'basic_ostream<char> *') is a pointer; did you mean to use '->'?
yyout.rdbuf(new_out.rdbuf());
~~~~~^
->
whereLexer.cc:1692:10: error: assigning to 'std::istream *' (aka 'basic_istream<char> *') from incompatible type 'std::istream **' (aka 'basic_istream<char> **'); remove &
new_in = &yyin;
^ ~~~~~
whereLexer.cc:1696:11: error: assigning to 'std::ostream *' (aka 'basic_ostream<char> *') from incompatible type 'std::ostream **' (aka 'basic_ostream<char> **'); remove &
new_out = &yyout;
^ ~~~~~~
whereLexer.cc:1699:17: error: no viable conversion from 'std::istream' (aka 'basic_istream<char>') to 'std::istream *' (aka 'basic_istream<char> *')
switch_streams(*new_in, *new_out);
^~~~~~~
whereLexer.cc:1689:49: note: passing argument to parameter 'new_in' here
void yyFlexLexer::switch_streams( std::istream* new_in, std::ostream* new_out )
^
whereLexer.cc:1705:18: error: out-of-line definition of 'LexerInput' does not match any declaration in '_wLexer'
int yyFlexLexer::LexerInput( char* buf, int max_size )
^~~~~~~~~~
whereLexer.cc:1708:11: error: member reference type 'std::istream *' (aka 'basic_istream<char> *') is a pointer; did you mean to use '->'?
if ( yyin.eof() || yyin.fail() )
~~~~^
->
fatal error: too many errors emitted, stopping now [-ferror-limit=]
20 errors generated.
configure:16772: $? = 1
configure:16781: g++ -g -O2 -std=c++11 -D_THREAD_SAFE -I /usr/include -DWITHOUT_FASTBIT_CONFIG_H -c src/whereLexer.cc
whereLexer.cc:1037:8: error: member reference type 'std::istream *' (aka 'basic_istream<char> *') is a pointer; did you mean to use '->'?
yyin.rdbuf(std::cin.rdbuf());
~~~~^
->
whereLexer.cc:1040:9: error: member reference type 'std::ostream *' (aka 'basic_ostream<char> *') is a pointer; did you mean to use '->'?
yyout.rdbuf(std::cout.rdbuf());
~~~~~^
->
whereLexer.cc:1507:50: error: member reference type 'std::istream *' (aka 'basic_istream<char> *') is a pointer; did you mean to use '->'?
YY_CURRENT_BUFFER_LVALUE->yy_input_file = yyin.rdbuf();
~~~~^
->
whereLexer.cc:1622:2: error: cannot initialize a member subobject of type 'std::istream *' (aka 'basic_istream<char> *') with an rvalue of type 'basic_streambuf<char_type, traits_type> *' (aka 'basic_streambuf<char, std::__1::char_traits<char> > *')
yyin(arg_yyin ? arg_yyin->rdbuf() : std::cin.rdbuf()),
^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
whereLexer.cc:1623:2: error: cannot initialize a member subobject of type 'std::ostream *' (aka 'basic_ostream<char> *') with an rvalue of type 'basic_streambuf<char_type, traits_type> *' (aka 'basic_streambuf<char, std::__1::char_traits<char> > *')
yyout(arg_yyout ? arg_yyout->rdbuf() : std::cout.rdbuf())
^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
whereLexer.cc:1625:2: error: use of undeclared identifier 'ctor_common'
ctor_common();
^
whereLexer.cc:1630:14: error: out-of-line definition of '_wLexer' does not match any declaration in '_wLexer'
yyFlexLexer::yyFlexLexer( std::istream& arg_yyin, std::ostream& arg_yyout ):
^~~~~~~~~~~
src/whereLexer.h:21:21: note: expanded from macro 'yyFlexLexer'
#define yyFlexLexer _wLexer
^~~~~~~
whereLexer.cc:1621:27: note: type of 1st parameter of member declaration does not match definition ('std::istream *' (aka 'basic_istream<char> *') vs 'std::istream &' (aka 'basic_istream<char> &'))
yyFlexLexer::yyFlexLexer( FLEX_STD istream* arg_yyin, FLEX_STD ostream* arg_yyout ):
^
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/FlexLexer.h:53:22: note: expanded from macro 'FLEX_STD'
# define FLEX_STD std::
^
whereLexer.cc:1631:2: error: cannot initialize a member subobject of type 'std::istream *' (aka 'basic_istream<char> *') with an rvalue of type 'basic_streambuf<char_type, traits_type> *' (aka 'basic_streambuf<char, std::__1::char_traits<char> > *')
yyin(arg_yyin.rdbuf()),
^ ~~~~~~~~~~~~~~~~
whereLexer.cc:1632:2: error: cannot initialize a member subobject of type 'std::ostream *' (aka 'basic_ostream<char> *') with an rvalue of type 'basic_streambuf<char_type, traits_type> *' (aka 'basic_streambuf<char, std::__1::char_traits<char> > *')