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tests: mnist tests failing due to images missing? #1436

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pdxjohnny opened this issue Feb 9, 2023 · 3 comments
Open

tests: mnist tests failing due to images missing? #1436

pdxjohnny opened this issue Feb 9, 2023 · 3 comments
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pdxjohnny commented Feb 9, 2023 •
edited

Related: #1264

2023-02-08T06:37:23.3956144Z test_shell (MNIST.test_mnist.TestMNIST) ... Traceback (most recent call last):
2023-02-08T06:37:23.3965998Z   File "/opt/hostedtoolcache/Python/3.7.15/x64/bin/dffml", line 8, in <module>
2023-02-08T06:37:23.3969940Z     sys.exit(CLI.main())
2023-02-08T06:37:23.3970408Z   File "/home/runner/work/dffml/dffml/dffml/util/cli/cmd.py", line 272, in main
2023-02-08T06:37:23.3970844Z     result = loop.run_until_complete(cls._main(*argv[1:]))
2023-02-08T06:37:23.3972745Z   File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/asyncio/base_events.py", line 587, in run_until_complete
2023-02-08T06:37:23.3973199Z     return future.result()
2023-02-08T06:37:23.3973631Z   File "/home/runner/work/dffml/dffml/dffml/util/cli/cmd.py", line 238, in _main
2023-02-08T06:37:23.3974006Z     return await cls.cli(*args)
2023-02-08T06:37:23.3974426Z   File "/home/runner/work/dffml/dffml/dffml/util/cli/cmd.py", line 224, in cli
2023-02-08T06:37:23.3974801Z     return await cmd.do_run()
2023-02-08T06:37:23.3975464Z   File "/home/runner/work/dffml/dffml/dffml/util/cli/cmd.py", line 201, in do_run
2023-02-08T06:37:23.3975867Z     return [res async for res in self.run()]
2023-02-08T06:37:23.3976314Z   File "/home/runner/work/dffml/dffml/dffml/util/cli/cmd.py", line 201, in <listcomp>
2023-02-08T06:37:23.3976724Z     return [res async for res in self.run()]
2023-02-08T06:37:23.3977144Z   File "/home/runner/work/dffml/dffml/dffml/cli/ml.py", line 91, in run
2023-02-08T06:37:23.3977599Z     self.model, self.sources, update=self.update, keep_record=True
2023-02-08T06:37:23.3978082Z   File "/home/runner/work/dffml/dffml/dffml/high_level/ml.py", line 280, in predict
2023-02-08T06:37:23.3978530Z     sctx = await astack.enter_async_context(records_to_sources(*args))
2023-02-08T06:37:23.3979049Z   File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/contextlib.py", line 570, in enter_async_context
2023-02-08T06:37:23.3979480Z     result = await _cm_type.__aenter__(cm)
2023-02-08T06:37:23.3979956Z   File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/contextlib.py", line 170, in __aenter__
2023-02-08T06:37:23.3980374Z     return await self.gen.__anext__()
2023-02-08T06:37:23.3980819Z   File "/home/runner/work/dffml/dffml/dffml/util/internal.py", line 59, in records_to_sources
2023-02-08T06:37:23.3981211Z     async with sources as sources:
2023-02-08T06:37:23.3981681Z   File "/home/runner/work/dffml/dffml/dffml/util/asynchelper.py", line 75, in __aenter__
2023-02-08T06:37:23.3982113Z     await self.__stack.enter_async_context(item)
2023-02-08T06:37:23.3982595Z   File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/contextlib.py", line 570, in enter_async_context
2023-02-08T06:37:23.3983023Z     result = await _cm_type.__aenter__(cm)
2023-02-08T06:37:23.3983464Z   File "/home/runner/work/dffml/dffml/dffml/util/asynchelper.py", line 75, in __aenter__
2023-02-08T06:37:23.3984172Z     await self.__stack.enter_async_context(item)
2023-02-08T06:37:23.3984809Z   File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/contextlib.py", line 570, in enter_async_context
2023-02-08T06:37:23.3985227Z     result = await _cm_type.__aenter__(cm)
2023-02-08T06:37:23.3985671Z   File "/home/runner/work/dffml/dffml/dffml/source/dfpreprocess.py", line 246, in __aenter__
2023-02-08T06:37:23.3986105Z     self.source = await self.config.source.__aenter__()
2023-02-08T06:37:23.3986578Z   File "/home/runner/work/dffml/dffml/dffml/source/file.py", line 47, in __aenter__
2023-02-08T06:37:23.3986950Z     await self._open()
2023-02-08T06:37:23.3987354Z   File "/home/runner/work/dffml/dffml/dffml/source/file.py", line 87, in _open
2023-02-08T06:37:23.3987729Z     await self.load_fd(fd)
2023-02-08T06:37:23.3988136Z   File "/home/runner/work/dffml/dffml/dffml/source/csv.py", line 195, in load_fd
2023-02-08T06:37:23.3988538Z     async with self._open_csv(fd) as open_file:
2023-02-08T06:37:23.3989018Z   File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/contextlib.py", line 170, in __aenter__
2023-02-08T06:37:23.3989430Z     return await self.gen.__anext__()
2023-02-08T06:37:23.3989858Z   File "/home/runner/work/dffml/dffml/dffml/source/csv.py", line 86, in _open_csv
2023-02-08T06:37:23.3990248Z     await self.read_csv(fd, open_file)
2023-02-08T06:37:23.3990675Z   File "/home/runner/work/dffml/dffml/dffml/source/csv.py", line 121, in read_csv
2023-02-08T06:37:23.3991042Z     row[loadfile]
2023-02-08T06:37:23.3991474Z   File "/home/runner/work/dffml/dffml/dffml/configloader/configloader.py", line 135, in load_file
2023-02-08T06:37:23.3991935Z     self.parsers, self.async_exit_stack, filepath, base_dir=base_dir
2023-02-08T06:37:23.3992423Z   File "/home/runner/work/dffml/dffml/dffml/configloader/configloader.py", line 109, in load_file
2023-02-08T06:37:23.3992855Z     config_path, conf_dict = await _get_config(path)
2023-02-08T06:37:23.3993338Z   File "/home/runner/work/dffml/dffml/dffml/configloader/configloader.py", line 91, in _get_config
2023-02-08T06:37:23.3993788Z     parsers, exit_stack, temp_filepath, base_dir=base_dir
2023-02-08T06:37:23.3994273Z   File "/home/runner/work/dffml/dffml/dffml/configloader/configloader.py", line 76, in load_single_file
2023-02-08T06:37:23.3994753Z     return config_path, await parsers[filetype].loadb(path.read_bytes())
2023-02-08T06:37:23.3995308Z   File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/pathlib.py", line 1214, in read_bytes
2023-02-08T06:37:23.3996101Z     with self.open(mode='rb') as f:
2023-02-08T06:37:23.3996533Z   File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/pathlib.py", line 1208, in open
2023-02-08T06:37:23.3996900Z     opener=self._opener)
2023-02-08T06:37:23.3997404Z   File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/pathlib.py", line 1063, in _opener
2023-02-08T06:37:23.3998015Z     return self._accessor.open(self, flags, mode)
2023-02-08T06:37:23.4005860Z FileNotFoundError: [Errno 2] No such file or directory: 'image1.png'


2023-02-08T06:46:12.3097962Z test_shell (test_quickstart.TestQuickstart) ... ok
2023-02-08T06:46:12.3098487Z 
2023-02-08T06:46:12.3098743Z ======================================================================
2023-02-08T06:46:12.3099174Z ERROR: test_shell (MNIST.test_mnist.TestMNIST)
2023-02-08T06:46:12.3099859Z ----------------------------------------------------------------------
2023-02-08T06:46:12.3100313Z Traceback (most recent call last):
2023-02-08T06:46:12.3100892Z   File "/home/runner/work/dffml/dffml/examples/MNIST/test_mnist.py", line 77, in test_shell
2023-02-08T06:46:12.3101389Z     ["bash", sh_filepath("predict.sh")]
2023-02-08T06:46:12.3101974Z   File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/subprocess.py", line 411, in check_output
2023-02-08T06:46:12.3102445Z     **kwargs).stdout
2023-02-08T06:46:12.3102925Z   File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/subprocess.py", line 512, in run
2023-02-08T06:46:12.3103378Z     output=stdout, stderr=stderr)
2023-02-08T06:46:12.3104073Z subprocess.CalledProcessError: Command '['bash', '/home/runner/work/dffml/dffml/examples/MNIST/predict.sh']' returned non-zero exit status 1.
2023-02-08T06:46:12.3104481Z 
2023-02-08T06:46:12.3104705Z ======================================================================
2023-02-08T06:46:12.3105154Z ERROR: test_shell_pytorch (flower17.test_flower17.TestFLOWER17)
2023-02-08T06:46:12.3105723Z ----------------------------------------------------------------------
2023-02-08T06:46:12.3106380Z Traceback (most recent call last):
2023-02-08T06:46:12.3106904Z   File "/home/runner/work/dffml/dffml/dffml/util/asynctestcase.py", line 114, in run_it
2023-02-08T06:46:12.3107424Z     result = self.loop.run_until_complete(coro(*args, **kwargs))
2023-02-08T06:46:12.3107999Z   File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/asyncio/base_events.py", line 587, in run_until_complete
2023-02-08T06:46:12.3108478Z     return future.result()
2023-02-08T06:46:12.3109005Z   File "/home/runner/work/dffml/dffml/examples/flower17/test_flower17.py", line 92, in test_shell_pytorch
2023-02-08T06:46:12.3109551Z     records = await CLI.cli(*cmd[1:-1])
2023-02-08T06:46:12.3110036Z   File "/home/runner/work/dffml/dffml/dffml/util/cli/cmd.py", line 224, in cli
2023-02-08T06:46:12.3110465Z     return await cmd.do_run()
2023-02-08T06:46:12.3110929Z   File "/home/runner/work/dffml/dffml/dffml/util/cli/cmd.py", line 201, in do_run
2023-02-08T06:46:12.3111399Z     return [res async for res in self.run()]
2023-02-08T06:46:12.3111907Z   File "/home/runner/work/dffml/dffml/dffml/util/cli/cmd.py", line 201, in <listcomp>
2023-02-08T06:46:12.3112487Z     return [res async for res in self.run()]
2023-02-08T06:46:12.3112951Z   File "/home/runner/work/dffml/dffml/dffml/cli/ml.py", line 91, in run
2023-02-08T06:46:12.3113452Z     self.model, self.sources, update=self.update, keep_record=True
2023-02-08T06:46:12.3113976Z   File "/home/runner/work/dffml/dffml/dffml/high_level/ml.py", line 280, in predict
2023-02-08T06:46:12.3114494Z     sctx = await astack.enter_async_context(records_to_sources(*args))
2023-02-08T06:46:12.3115073Z   File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/contextlib.py", line 570, in enter_async_context
2023-02-08T06:46:12.3115569Z     result = await _cm_type.__aenter__(cm)
2023-02-08T06:46:12.3116088Z   File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/contextlib.py", line 170, in __aenter__
2023-02-08T06:46:12.3116567Z     return await self.gen.__anext__()
2023-02-08T06:46:12.3117073Z   File "/home/runner/work/dffml/dffml/dffml/util/internal.py", line 59, in records_to_sources
2023-02-08T06:46:12.3117540Z     async with sources as sources:
2023-02-08T06:46:12.3118036Z   File "/home/runner/work/dffml/dffml/dffml/util/asynchelper.py", line 75, in __aenter__
2023-02-08T06:46:12.3118524Z     await self.__stack.enter_async_context(item)
2023-02-08T06:46:12.3119056Z   File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/contextlib.py", line 570, in enter_async_context
2023-02-08T06:46:12.3119540Z     result = await _cm_type.__aenter__(cm)
2023-02-08T06:46:12.3120035Z   File "/home/runner/work/dffml/dffml/dffml/util/asynchelper.py", line 75, in __aenter__
2023-02-08T06:46:12.3120507Z     await self.__stack.enter_async_context(item)
2023-02-08T06:46:12.3121018Z   File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/contextlib.py", line 570, in enter_async_context
2023-02-08T06:46:12.3121491Z     result = await _cm_type.__aenter__(cm)
2023-02-08T06:46:12.3121972Z   File "/home/runner/work/dffml/dffml/dffml/source/file.py", line 47, in __aenter__
2023-02-08T06:46:12.3122399Z     await self._open()
2023-02-08T06:46:12.3122844Z   File "/home/runner/work/dffml/dffml/dffml/source/file.py", line 87, in _open
2023-02-08T06:46:12.3123271Z     await self.load_fd(fd)
2023-02-08T06:46:12.3123740Z   File "/home/runner/work/dffml/dffml/dffml/source/csv.py", line 195, in load_fd
2023-02-08T06:46:12.3124202Z     async with self._open_csv(fd) as open_file:
2023-02-08T06:46:12.3124715Z   File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/contextlib.py", line 170, in __aenter__
2023-02-08T06:46:12.3125180Z     return await self.gen.__anext__()
2023-02-08T06:46:12.3125665Z   File "/home/runner/work/dffml/dffml/dffml/source/csv.py", line 86, in _open_csv
2023-02-08T06:46:12.3126112Z     await self.read_csv(fd, open_file)
2023-02-08T06:46:12.3126583Z   File "/home/runner/work/dffml/dffml/dffml/source/csv.py", line 121, in read_csv
2023-02-08T06:46:12.3127012Z     row[loadfile]
2023-02-08T06:46:12.3127586Z   File "/home/runner/work/dffml/dffml/dffml/configloader/configloader.py", line 135, in load_file
2023-02-08T06:46:12.3128121Z     self.parsers, self.async_exit_stack, filepath, base_dir=base_dir
2023-02-08T06:46:12.3128669Z   File "/home/runner/work/dffml/dffml/dffml/configloader/configloader.py", line 109, in load_file
2023-02-08T06:46:12.3129257Z     config_path, conf_dict = await _get_config(path)
2023-02-08T06:46:12.3129787Z   File "/home/runner/work/dffml/dffml/dffml/configloader/configloader.py", line 91, in _get_config
2023-02-08T06:46:12.3130306Z     parsers, exit_stack, temp_filepath, base_dir=base_dir
2023-02-08T06:46:12.3130855Z   File "/home/runner/work/dffml/dffml/dffml/configloader/configloader.py", line 76, in load_single_file
2023-02-08T06:46:12.3131401Z     return config_path, await parsers[filetype].loadb(path.read_bytes())
2023-02-08T06:46:12.3131972Z   File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/pathlib.py", line 1214, in read_bytes
2023-02-08T06:46:12.3132518Z     with self.open(mode='rb') as f:
2023-02-08T06:46:12.3133097Z   File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/pathlib.py", line 1208, in open
2023-02-08T06:46:12.3133543Z     opener=self._opener)
2023-02-08T06:46:12.3134045Z   File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/pathlib.py", line 1063, in _opener
2023-02-08T06:46:12.3134520Z     return self._accessor.open(self, flags, mode)
2023-02-08T06:46:12.3135077Z FileNotFoundError: [Errno 2] No such file or directory: 'daisy.jpg'
2023-02-08T06:46:12.3135581Z 
2023-02-08T06:46:12.3135807Z ======================================================================
2023-02-08T06:46:12.3136257Z ERROR: test_shell_sklearn (flower17.test_flower17.TestFLOWER17)
2023-02-08T06:46:12.3136824Z ----------------------------------------------------------------------
2023-02-08T06:46:12.3137262Z Traceback (most recent call last):
2023-02-08T06:46:12.3137768Z   File "/home/runner/work/dffml/dffml/dffml/util/asynctestcase.py", line 114, in run_it
2023-02-08T06:46:12.3138284Z     result = self.loop.run_until_complete(coro(*args, **kwargs))
2023-02-08T06:46:12.3138858Z   File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/asyncio/base_events.py", line 587, in run_until_complete
2023-02-08T06:46:12.3139334Z     return future.result()
2023-02-08T06:46:12.3139838Z   File "/home/runner/work/dffml/dffml/examples/flower17/test_flower17.py", line 56, in test_shell_sklearn
2023-02-08T06:46:12.3140301Z     records = await CLI.cli(*cmd)
2023-02-08T06:46:12.3140769Z   File "/home/runner/work/dffml/dffml/dffml/util/cli/cmd.py", line 224, in cli
2023-02-08T06:46:12.3141206Z     return await cmd.do_run()
2023-02-08T06:46:12.3141665Z   File "/home/runner/work/dffml/dffml/dffml/util/cli/cmd.py", line 201, in do_run
2023-02-08T06:46:12.3142114Z     return [res async for res in self.run()]
2023-02-08T06:46:12.3142601Z   File "/home/runner/work/dffml/dffml/dffml/util/cli/cmd.py", line 201, in <listcomp>
2023-02-08T06:46:12.3143061Z     return [res async for res in self.run()]
2023-02-08T06:46:12.3143533Z   File "/home/runner/work/dffml/dffml/dffml/cli/ml.py", line 91, in run
2023-02-08T06:46:12.3144024Z     self.model, self.sources, update=self.update, keep_record=True
2023-02-08T06:46:12.3144540Z   File "/home/runner/work/dffml/dffml/dffml/high_level/ml.py", line 288, in predict
2023-02-08T06:46:12.3145006Z     async for record in mctx.predict(sctx):
2023-02-08T06:46:12.3145521Z   File "/home/runner/work/dffml/dffml/model/scikit/dffml_model_scikit/scikit_base.py", line 184, in predict
2023-02-08T06:46:12.3146042Z     async for record in sources.with_features(self.features):
2023-02-08T06:46:12.3146564Z   File "/home/runner/work/dffml/dffml/dffml/source/source.py", line 202, in with_features
2023-02-08T06:46:12.3147036Z     "\n\nLooking for records with the "
2023-02-08T06:46:12.3147563Z   File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/unittest/case.py", line 1112, in assertSetEqual
2023-02-08T06:46:12.3148069Z     self.fail(self._formatMessage(msg, standardMsg))
2023-02-08T06:46:12.3148692Z   File "/opt/hostedtoolcache/Python/3.7.15/x64/lib/python3.7/unittest/case.py", line 693, in fail
2023-02-08T06:46:12.3149210Z     raise self.failureException(msg)
2023-02-08T06:46:12.3149741Z dffml.source.source.NoRecordsWithMatchingFeatures: Items in the first set but not the second:
2023-02-08T06:46:12.3150265Z 'Haralick'
2023-02-08T06:46:12.3150616Z 'Histogram'
2023-02-08T06:46:12.3150981Z 'HuMoments' : 
2023-02-08T06:46:12.3151219Z 
2023-02-08T06:46:12.3151767Z Looking for records with the all of the following features: ['Histogram', 'HuMoments', 'Haralick']. But no records had all of them. Options for features are: set(). Searched 0 records.
2023-02-08T06:46:12.3152207Z 
2023-02-08T06:46:12.3152540Z ----------------------------------------------------------------------
2023-02-08T06:46:12.3152971Z Ran 10 tests in 6626.170s
@pdxjohnny pdxjohnny added the bug Something isn't working label Feb 9, 2023
pdxjohnny added a commit that referenced this issue Feb 9, 2023
@pdxjohnny
ci: testing: Disable macos
b730bc8 
Failing due to MNIST?

Related: #1436
@pyther-hub
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sir please elaborate the issue more @pdxjohnny @programmer290399

@pdxjohnny
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@pyther-hub I'm not sure yet what the issue is, some debugging may be required. The following should run one of the failing tests:

$ python -m unittest -v test_mnist.TestMNIST.test_shell

Likely a download URL may have changed

@pyther-hub
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https://github.com/intel/dffml/files/4283897/train-labels-idx1-ubyte.gz" this was the URL link now it is not working, what is the new link or how should I make one of my own?

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@pdxjohnny @pyther-hub