diff --git a/lib/analyze-action.js b/lib/analyze-action.js
index 8424258062..5b1c99ba23 100644
--- a/lib/analyze-action.js
+++ b/lib/analyze-action.js
@@ -102,7 +102,7 @@ function doesGoExtractionOutputExist(config) {
  * steps.
  *
  * - We detect whether an autobuild step is present by checking the
- * `CODEQL_ACTION_DID_AUTOBUILD_GOLANG` environment variable, which is set
+ * `util.DID_AUTOBUILD_GO_ENV_VAR_NAME` environment variable, which is set
  * when the autobuilder is invoked.
  * - We approximate whether manual build steps are present by looking at
  * whether any extraction output already exists for Go.
@@ -115,7 +115,7 @@ async function runAutobuildIfLegacyGoWorkflow(config, featureFlags, logger) {
         logger.debug("Won't run Go autobuild since Go extraction reconciliation is not enabled.");
         return;
     }
-    if (process.env["CODEQL_ACTION_DID_AUTOBUILD_GOLANG"] === "true") {
+    if (process.env[util.DID_AUTOBUILD_GO_ENV_VAR_NAME] === "true") {
         // This log line is info level while Go extraction reconciliation is in beta.
         // We will make it debug level once Go extraction reconciliation is GA.
         logger.info("Won't run Go autobuild since it has already been run.");
diff --git a/lib/analyze-action.js.map b/lib/analyze-action.js.map
index 0557a3a7ba..fd3514a100 100644
--- a/lib/analyze-action.js.map
+++ b/lib/analyze-action.js.map
@@ -1 +1 @@
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\ No newline at end of file
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\ No newline at end of file
diff --git a/lib/autobuild-action.js b/lib/autobuild-action.js
index 5a8b7ef65a..bdc1a27f80 100644
--- a/lib/autobuild-action.js
+++ b/lib/autobuild-action.js
@@ -46,7 +46,8 @@ async function run() {
     const startedAt = new Date();
     const logger = (0, logging_1.getActionsLogger)();
     await (0, util_1.checkActionVersion)(pkg.version);
-    let language = undefined;
+    let currentLanguage = undefined;
+    let languages = undefined;
     try {
         if (!(await (0, actions_util_1.sendStatusReport)(await (0, actions_util_1.createStatusReportBase)("autobuild", "starting", startedAt)))) {
             return;
@@ -58,26 +59,29 @@ async function run() {
         if (config === undefined) {
             throw new Error("Config file could not be found at expected location. Has the 'init' action been called?");
         }
-        language = await (0, autobuild_1.determineAutobuildLanguage)(config, featureFlags, logger);
-        if (language !== undefined) {
+        languages = await (0, autobuild_1.determineAutobuildLanguages)(config, featureFlags, logger);
+        if (languages !== undefined) {
             const workingDirectory = (0, actions_util_1.getOptionalInput)("working-directory");
             if (workingDirectory) {
                 logger.info(`Changing autobuilder working directory to ${workingDirectory}`);
                 process.chdir(workingDirectory);
             }
-            await (0, autobuild_1.runAutobuild)(language, config, logger);
-            if (language === languages_1.Language.go) {
-                core.exportVariable("CODEQL_ACTION_DID_AUTOBUILD_GOLANG", "true");
+            for (const language of languages) {
+                currentLanguage = language;
+                await (0, autobuild_1.runAutobuild)(language, config, logger);
+                if (language === languages_1.Language.go) {
+                    core.exportVariable(util_1.DID_AUTOBUILD_GO_ENV_VAR_NAME, "true");
+                }
             }
         }
     }
     catch (error) {
         core.setFailed(`We were unable to automatically build your code. Please replace the call to the autobuild action with your custom build steps.  ${error instanceof Error ? error.message : String(error)}`);
         console.log(error);
-        await sendCompletedStatusReport(startedAt, language ? [language] : [], language, error instanceof Error ? error : new Error(String(error)));
+        await sendCompletedStatusReport(startedAt, languages !== null && languages !== void 0 ? languages : [], currentLanguage, error instanceof Error ? error : new Error(String(error)));
         return;
     }
-    await sendCompletedStatusReport(startedAt, language ? [language] : []);
+    await sendCompletedStatusReport(startedAt, languages !== null && languages !== void 0 ? languages : []);
 }
 async function runWrapper() {
     try {
diff --git a/lib/autobuild-action.js.map b/lib/autobuild-action.js.map
index 41571bf7c4..15155c4d9e 100644
--- a/lib/autobuild-action.js.map
+++ b/lib/autobuild-action.js.map
@@ -1 +1 @@
-{"version":3,"file":"autobuild-action.js","sourceRoot":"","sources":["../src/autobuild-action.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;AAAA,oDAAsC;AAEtC,iDAOwB;AACxB,6CAA0E;AAC1E,2CAAuE;AACvE,4DAA8C;AAC9C,mDAAqD;AACrD,2CAAuC;AACvC,uCAA6C;AAC7C,6CAAkD;AAClD,iCAMgB;AAEhB,8CAA8C;AAC9C,MAAM,GAAG,GAAG,OAAO,CAAC,iBAAiB,CAAC,CAAC;AASvC,KAAK,UAAU,yBAAyB,CACtC,SAAe,EACf,YAAsB,EACtB,eAAwB,EACxB,KAAa;IAEb,IAAA,4BAAqB,EAAC,WAAI,CAAC,OAAO,EAAE,GAAG,CAAC,OAAO,CAAC,CAAC;IAEjD,MAAM,MAAM,GAAG,IAAA,+BAAgB,EAAC,KAAK,EAAE,eAAe,CAAC,CAAC;IACxD,MAAM,gBAAgB,GAAG,MAAM,IAAA,qCAAsB,EACnD,WAAW,EACX,MAAM,EACN,SAAS,EACT,KAAK,aAAL,KAAK,uBAAL,KAAK,CAAE,OAAO,EACd,KAAK,aAAL,KAAK,uBAAL,KAAK,CAAE,KAAK,CACb,CAAC;IACF,MAAM,YAAY,GAA0B;QAC1C,GAAG,gBAAgB;QACnB,mBAAmB,EAAE,YAAY,CAAC,IAAI,CAAC,GAAG,CAAC;QAC3C,iBAAiB,EAAE,eAAe;KACnC,CAAC;IACF,MAAM,IAAA,+BAAgB,EAAC,YAAY,CAAC,CAAC;AACvC,CAAC;AAED,KAAK,UAAU,GAAG;IAChB,MAAM,SAAS,GAAG,IAAI,IAAI,EAAE,CAAC;IAC7B,MAAM,MAAM,GAAG,IAAA,0BAAgB,GAAE,CAAC;IAClC,MAAM,IAAA,yBAAkB,EAAC,GAAG,CAAC,OAAO,CAAC,CAAC;IACtC,IAAI,QAAQ,GAAyB,SAAS,CAAC;IAC/C,IAAI;QACF,IACE,CAAC,CAAC,MAAM,IAAA,+BAAgB,EACtB,MAAM,IAAA,qCAAsB,EAAC,WAAW,EAAE,UAAU,EAAE,SAAS,CAAC,CACjE,CAAC,EACF;YACA,OAAO;SACR;QAED,MAAM,aAAa,GAAG,MAAM,IAAA,wCAA2B,GAAE,CAAC;QAC1D,IAAA,gCAAyB,EAAC,aAAa,EAAE,MAAM,EAAE,WAAI,CAAC,OAAO,CAAC,CAAC;QAE/D,MAAM,YAAY,GAAG,IAAI,kCAAkB,CACzC,aAAa,EACb,IAAA,0BAAa,GAAE,EACf,IAAA,+BAAkB,EAAC,IAAA,0BAAmB,EAAC,mBAAmB,CAAC,CAAC,EAC5D,MAAM,CACP,CAAC;QAEF,MAAM,MAAM,GAAG,MAAM,WAAW,CAAC,SAAS,CAAC,IAAA,oCAAqB,GAAE,EAAE,MAAM,CAAC,CAAC;QAC5E,IAAI,MAAM,KAAK,SAAS,EAAE;YACxB,MAAM,IAAI,KAAK,CACb,yFAAyF,CAC1F,CAAC;SACH;QAED,QAAQ,GAAG,MAAM,IAAA,sCAA0B,EAAC,MAAM,EAAE,YAAY,EAAE,MAAM,CAAC,CAAC;QAC1E,IAAI,QAAQ,KAAK,SAAS,EAAE;YAC1B,MAAM,gBAAgB,GAAG,IAAA,+BAAgB,EAAC,mBAAmB,CAAC,CAAC;YAC/D,IAAI,gBAAgB,EAAE;gBACpB,MAAM,CAAC,IAAI,CACT,6CAA6C,gBAAgB,EAAE,CAChE,CAAC;gBACF,OAAO,CAAC,KAAK,CAAC,gBAAgB,CAAC,CAAC;aACjC;YACD,MAAM,IAAA,wBAAY,EAAC,QAAQ,EAAE,MAAM,EAAE,MAAM,CAAC,CAAC;YAC7C,IAAI,QAAQ,KAAK,oBAAQ,CAAC,EAAE,EAAE;gBAC5B,IAAI,CAAC,cAAc,CAAC,oCAAoC,EAAE,MAAM,CAAC,CAAC;aACnE;SACF;KACF;IAAC,OAAO,KAAK,EAAE;QACd,IAAI,CAAC,SAAS,CACZ,mIACE,KAAK,YAAY,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,MAAM,CAAC,KAAK,CACvD,EAAE,CACH,CAAC;QACF,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC;QACnB,MAAM,yBAAyB,CAC7B,SAAS,EACT,QAAQ,CAAC,CAAC,CAAC,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC,EAAE,EAC1B,QAAQ,EACR,KAAK,YAAY,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,IAAI,KAAK,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC,CAC1D,CAAC;QACF,OAAO;KACR;IAED,MAAM,yBAAyB,CAAC,SAAS,EAAE,QAAQ,CAAC,CAAC,CAAC,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC;AACzE,CAAC;AAED,KAAK,UAAU,UAAU;IACvB,IAAI;QACF,MAAM,GAAG,EAAE,CAAC;KACb;IAAC,OAAO,KAAK,EAAE;QACd,IAAI,CAAC,SAAS,CAAC,4BAA4B,KAAK,EAAE,CAAC,CAAC;QACpD,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC;KACpB;AACH,CAAC;AAED,KAAK,UAAU,EAAE,CAAC"}
\ No newline at end of file
+{"version":3,"file":"autobuild-action.js","sourceRoot":"","sources":["../src/autobuild-action.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;AAAA,oDAAsC;AAEtC,iDAOwB;AACxB,6CAA0E;AAC1E,2CAAwE;AACxE,4DAA8C;AAC9C,mDAAqD;AACrD,2CAAuC;AACvC,uCAA6C;AAC7C,6CAAkD;AAClD,iCAOgB;AAEhB,8CAA8C;AAC9C,MAAM,GAAG,GAAG,OAAO,CAAC,iBAAiB,CAAC,CAAC;AASvC,KAAK,UAAU,yBAAyB,CACtC,SAAe,EACf,YAAsB,EACtB,eAAwB,EACxB,KAAa;IAEb,IAAA,4BAAqB,EAAC,WAAI,CAAC,OAAO,EAAE,GAAG,CAAC,OAAO,CAAC,CAAC;IAEjD,MAAM,MAAM,GAAG,IAAA,+BAAgB,EAAC,KAAK,EAAE,eAAe,CAAC,CAAC;IACxD,MAAM,gBAAgB,GAAG,MAAM,IAAA,qCAAsB,EACnD,WAAW,EACX,MAAM,EACN,SAAS,EACT,KAAK,aAAL,KAAK,uBAAL,KAAK,CAAE,OAAO,EACd,KAAK,aAAL,KAAK,uBAAL,KAAK,CAAE,KAAK,CACb,CAAC;IACF,MAAM,YAAY,GAA0B;QAC1C,GAAG,gBAAgB;QACnB,mBAAmB,EAAE,YAAY,CAAC,IAAI,CAAC,GAAG,CAAC;QAC3C,iBAAiB,EAAE,eAAe;KACnC,CAAC;IACF,MAAM,IAAA,+BAAgB,EAAC,YAAY,CAAC,CAAC;AACvC,CAAC;AAED,KAAK,UAAU,GAAG;IAChB,MAAM,SAAS,GAAG,IAAI,IAAI,EAAE,CAAC;IAC7B,MAAM,MAAM,GAAG,IAAA,0BAAgB,GAAE,CAAC;IAClC,MAAM,IAAA,yBAAkB,EAAC,GAAG,CAAC,OAAO,CAAC,CAAC;IACtC,IAAI,eAAe,GAAyB,SAAS,CAAC;IACtD,IAAI,SAAS,GAA2B,SAAS,CAAC;IAClD,IAAI;QACF,IACE,CAAC,CAAC,MAAM,IAAA,+BAAgB,EACtB,MAAM,IAAA,qCAAsB,EAAC,WAAW,EAAE,UAAU,EAAE,SAAS,CAAC,CACjE,CAAC,EACF;YACA,OAAO;SACR;QAED,MAAM,aAAa,GAAG,MAAM,IAAA,wCAA2B,GAAE,CAAC;QAC1D,IAAA,gCAAyB,EAAC,aAAa,EAAE,MAAM,EAAE,WAAI,CAAC,OAAO,CAAC,CAAC;QAE/D,MAAM,YAAY,GAAG,IAAI,kCAAkB,CACzC,aAAa,EACb,IAAA,0BAAa,GAAE,EACf,IAAA,+BAAkB,EAAC,IAAA,0BAAmB,EAAC,mBAAmB,CAAC,CAAC,EAC5D,MAAM,CACP,CAAC;QAEF,MAAM,MAAM,GAAG,MAAM,WAAW,CAAC,SAAS,CAAC,IAAA,oCAAqB,GAAE,EAAE,MAAM,CAAC,CAAC;QAC5E,IAAI,MAAM,KAAK,SAAS,EAAE;YACxB,MAAM,IAAI,KAAK,CACb,yFAAyF,CAC1F,CAAC;SACH;QAED,SAAS,GAAG,MAAM,IAAA,uCAA2B,EAAC,MAAM,EAAE,YAAY,EAAE,MAAM,CAAC,CAAC;QAC5E,IAAI,SAAS,KAAK,SAAS,EAAE;YAC3B,MAAM,gBAAgB,GAAG,IAAA,+BAAgB,EAAC,mBAAmB,CAAC,CAAC;YAC/D,IAAI,gBAAgB,EAAE;gBACpB,MAAM,CAAC,IAAI,CACT,6CAA6C,gBAAgB,EAAE,CAChE,CAAC;gBACF,OAAO,CAAC,KAAK,CAAC,gBAAgB,CAAC,CAAC;aACjC;YACD,KAAK,MAAM,QAAQ,IAAI,SAAS,EAAE;gBAChC,eAAe,GAAG,QAAQ,CAAC;gBAC3B,MAAM,IAAA,wBAAY,EAAC,QAAQ,EAAE,MAAM,EAAE,MAAM,CAAC,CAAC;gBAC7C,IAAI,QAAQ,KAAK,oBAAQ,CAAC,EAAE,EAAE;oBAC5B,IAAI,CAAC,cAAc,CAAC,oCAA6B,EAAE,MAAM,CAAC,CAAC;iBAC5D;aACF;SACF;KACF;IAAC,OAAO,KAAK,EAAE;QACd,IAAI,CAAC,SAAS,CACZ,mIACE,KAAK,YAAY,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,MAAM,CAAC,KAAK,CACvD,EAAE,CACH,CAAC;QACF,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC;QACnB,MAAM,yBAAyB,CAC7B,SAAS,EACT,SAAS,aAAT,SAAS,cAAT,SAAS,GAAI,EAAE,EACf,eAAe,EACf,KAAK,YAAY,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,IAAI,KAAK,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC,CAC1D,CAAC;QACF,OAAO;KACR;IAED,MAAM,yBAAyB,CAAC,SAAS,EAAE,SAAS,aAAT,SAAS,cAAT,SAAS,GAAI,EAAE,CAAC,CAAC;AAC9D,CAAC;AAED,KAAK,UAAU,UAAU;IACvB,IAAI;QACF,MAAM,GAAG,EAAE,CAAC;KACb;IAAC,OAAO,KAAK,EAAE;QACd,IAAI,CAAC,SAAS,CAAC,4BAA4B,KAAK,EAAE,CAAC,CAAC;QACpD,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC;KACpB;AACH,CAAC;AAED,KAAK,UAAU,EAAE,CAAC"}
\ No newline at end of file
diff --git a/lib/autobuild.js b/lib/autobuild.js
index 06fbefd2f3..842a04fd86 100644
--- a/lib/autobuild.js
+++ b/lib/autobuild.js
@@ -19,31 +19,78 @@ var __importStar = (this && this.__importStar) || function (mod) {
     return result;
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.runAutobuild = exports.determineAutobuildLanguage = void 0;
+exports.runAutobuild = exports.determineAutobuildLanguages = void 0;
 const codeql_1 = require("./codeql");
 const languages_1 = require("./languages");
 const util = __importStar(require("./util"));
-async function determineAutobuildLanguage(config, featureFlags, logger) {
+async function determineAutobuildLanguages(config, featureFlags, logger) {
     const isGoExtractionReconciliationEnabled = await util.isGoExtractionReconciliationEnabled(featureFlags);
     // Attempt to find a language to autobuild
     // We want pick the dominant language in the repo from the ones we're able to build
     // The languages are sorted in order specified by user or by lines of code if we got
     // them from the GitHub API, so try to build the first language on the list.
     const autobuildLanguages = config.languages.filter((l) => (0, languages_1.isTracedLanguage)(l, isGoExtractionReconciliationEnabled, logger));
-    const language = autobuildLanguages[0];
-    if (!language) {
+    if (!autobuildLanguages) {
         logger.info("None of the languages in this project require extra build steps");
         return undefined;
     }
-    logger.debug(`Detected dominant traced language: ${language}`);
-    if (autobuildLanguages.length > 1) {
-        logger.warning(`We will only automatically build ${language} code. If you wish to scan ${autobuildLanguages
+    /**
+     * Additionally autobuild Go in the autobuild Action to ensure backwards
+     * compatibility for users performing a multi-language build within a single
+     * job.
+     *
+     * For example, consider a user with the following workflow file:
+     *
+     * ```yml
+     * - uses: github/codeql-action/init@v2
+     *   with:
+     *     languages: go, java
+     * - uses: github/codeql-action/autobuild@v2
+     * - uses: github/codeql-action/analyze@v2
+     * ```
+     *
+     * - With Go extraction disabled, we will run the Java autobuilder in the
+     *   autobuild Action, ensuring we extract both Java and Go code.
+     * - With Go extraction enabled, taking the previous behavior we'd run the Go
+     *   autobuilder, since Go is first on the list of languages. We wouldn't run
+     *   the Java autobuilder at all and so we'd only extract Go code.
+     *
+     * We therefore introduce a special case here such that we'll autobuild Go
+     * in addition to the primary non-Go traced language in the autobuild Action.
+     *
+     * This special case behavior should be removed as part of the next major
+     * version of the CodeQL Action.
+     */
+    const autobuildLanguagesWithoutGo = autobuildLanguages.filter((l) => l !== languages_1.Language.go);
+    const languages = [];
+    // First run the autobuilder for the first non-Go traced language, if one
+    // exists.
+    if (autobuildLanguagesWithoutGo[0] !== undefined) {
+        languages.push(autobuildLanguagesWithoutGo[0]);
+    }
+    // If Go is requested, run the Go autobuilder last to ensure it doesn't
+    // interfere with the other autobuilder.
+    if (autobuildLanguages.length !== autobuildLanguagesWithoutGo.length) {
+        languages.push(languages_1.Language.go);
+    }
+    logger.debug(`Will autobuild ${languages.join(" and ")}.`);
+    // In general the autobuilders for other traced languages may conflict with
+    // each other. Therefore if a user has requested more than one non-Go traced
+    // language, we ask for manual build steps.
+    // Matrixing the build would also work, but that would change the SARIF
+    // categories, potentially leading to a "stale tips" situation where alerts
+    // that should be fixed remain on a repo since they are linked to SARIF
+    // categories that are no longer updated.
+    if (autobuildLanguagesWithoutGo.length > 1) {
+        logger.warning(`We will only automatically build ${languages.join(" and ")} code. If you wish to scan ${autobuildLanguagesWithoutGo
             .slice(1)
-            .join(" and ")}, you must replace this call with custom build steps.`);
+            .join(" and ")}, you must replace the autobuild step of your workflow with custom build steps. ` +
+            "For more information, see " +
+            "https://docs.github.com/en/code-security/code-scanning/automatically-scanning-your-code-for-vulnerabilities-and-errors/configuring-the-codeql-workflow-for-compiled-languages#adding-build-steps-for-a-compiled-language");
     }
-    return language;
+    return languages;
 }
-exports.determineAutobuildLanguage = determineAutobuildLanguage;
+exports.determineAutobuildLanguages = determineAutobuildLanguages;
 async function runAutobuild(language, config, logger) {
     logger.startGroup(`Attempting to automatically build ${language} code`);
     const codeQL = await (0, codeql_1.getCodeQL)(config.codeQLCmd);
diff --git a/lib/autobuild.js.map b/lib/autobuild.js.map
index 246011c64f..7cc66049e5 100644
--- a/lib/autobuild.js.map
+++ b/lib/autobuild.js.map
@@ -1 +1 @@
-{"version":3,"file":"autobuild.js","sourceRoot":"","sources":["../src/autobuild.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;AAAA,qCAAqC;AAGrC,2CAAyD;AAEzD,6CAA+B;AAExB,KAAK,UAAU,0BAA0B,CAC9C,MAA0B,EAC1B,YAA0B,EAC1B,MAAc;IAEd,MAAM,mCAAmC,GACvC,MAAM,IAAI,CAAC,mCAAmC,CAAC,YAAY,CAAC,CAAC;IAC/D,0CAA0C;IAC1C,mFAAmF;IACnF,oFAAoF;IACpF,4EAA4E;IAC5E,MAAM,kBAAkB,GAAG,MAAM,CAAC,SAAS,CAAC,MAAM,CAAC,CAAC,CAAC,EAAE,EAAE,CACvD,IAAA,4BAAgB,EAAC,CAAC,EAAE,mCAAmC,EAAE,MAAM,CAAC,CACjE,CAAC;IACF,MAAM,QAAQ,GAAG,kBAAkB,CAAC,CAAC,CAAC,CAAC;IAEvC,IAAI,CAAC,QAAQ,EAAE;QACb,MAAM,CAAC,IAAI,CACT,iEAAiE,CAClE,CAAC;QACF,OAAO,SAAS,CAAC;KAClB;IAED,MAAM,CAAC,KAAK,CAAC,sCAAsC,QAAQ,EAAE,CAAC,CAAC;IAE/D,IAAI,kBAAkB,CAAC,MAAM,GAAG,CAAC,EAAE;QACjC,MAAM,CAAC,OAAO,CACZ,oCAAoC,QAAQ,8BAA8B,kBAAkB;aACzF,KAAK,CAAC,CAAC,CAAC;aACR,IAAI,CAAC,OAAO,CAAC,uDAAuD,CACxE,CAAC;KACH;IAED,OAAO,QAAQ,CAAC;AAClB,CAAC;AAlCD,gEAkCC;AAEM,KAAK,UAAU,YAAY,CAChC,QAAkB,EAClB,MAA0B,EAC1B,MAAc;IAEd,MAAM,CAAC,UAAU,CAAC,qCAAqC,QAAQ,OAAO,CAAC,CAAC;IACxE,MAAM,MAAM,GAAG,MAAM,IAAA,kBAAS,EAAC,MAAM,CAAC,SAAS,CAAC,CAAC;IACjD,MAAM,MAAM,CAAC,YAAY,CAAC,QAAQ,CAAC,CAAC;IACpC,MAAM,CAAC,QAAQ,EAAE,CAAC;AACpB,CAAC;AATD,oCASC"}
\ No newline at end of file
+{"version":3,"file":"autobuild.js","sourceRoot":"","sources":["../src/autobuild.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;AAAA,qCAAqC;AAGrC,2CAAyD;AAEzD,6CAA+B;AAExB,KAAK,UAAU,2BAA2B,CAC/C,MAA0B,EAC1B,YAA0B,EAC1B,MAAc;IAEd,MAAM,mCAAmC,GACvC,MAAM,IAAI,CAAC,mCAAmC,CAAC,YAAY,CAAC,CAAC;IAC/D,0CAA0C;IAC1C,mFAAmF;IACnF,oFAAoF;IACpF,4EAA4E;IAC5E,MAAM,kBAAkB,GAAG,MAAM,CAAC,SAAS,CAAC,MAAM,CAAC,CAAC,CAAC,EAAE,EAAE,CACvD,IAAA,4BAAgB,EAAC,CAAC,EAAE,mCAAmC,EAAE,MAAM,CAAC,CACjE,CAAC;IAEF,IAAI,CAAC,kBAAkB,EAAE;QACvB,MAAM,CAAC,IAAI,CACT,iEAAiE,CAClE,CAAC;QACF,OAAO,SAAS,CAAC;KAClB;IAED;;;;;;;;;;;;;;;;;;;;;;;;;;OA0BG;IACH,MAAM,2BAA2B,GAAG,kBAAkB,CAAC,MAAM,CAC3D,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,KAAK,oBAAQ,CAAC,EAAE,CACzB,CAAC;IAEF,MAAM,SAAS,GAAe,EAAE,CAAC;IACjC,yEAAyE;IACzE,UAAU;IACV,IAAI,2BAA2B,CAAC,CAAC,CAAC,KAAK,SAAS,EAAE;QAChD,SAAS,CAAC,IAAI,CAAC,2BAA2B,CAAC,CAAC,CAAC,CAAC,CAAC;KAChD;IACD,uEAAuE;IACvE,wCAAwC;IACxC,IAAI,kBAAkB,CAAC,MAAM,KAAK,2BAA2B,CAAC,MAAM,EAAE;QACpE,SAAS,CAAC,IAAI,CAAC,oBAAQ,CAAC,EAAE,CAAC,CAAC;KAC7B;IAED,MAAM,CAAC,KAAK,CAAC,kBAAkB,SAAS,CAAC,IAAI,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC;IAE3D,2EAA2E;IAC3E,4EAA4E;IAC5E,2CAA2C;IAC3C,uEAAuE;IACvE,2EAA2E;IAC3E,uEAAuE;IACvE,yCAAyC;IACzC,IAAI,2BAA2B,CAAC,MAAM,GAAG,CAAC,EAAE;QAC1C,MAAM,CAAC,OAAO,CACZ,oCAAoC,SAAS,CAAC,IAAI,CAChD,OAAO,CACR,8BAA8B,2BAA2B;aACvD,KAAK,CAAC,CAAC,CAAC;aACR,IAAI,CACH,OAAO,CACR,kFAAkF;YACnF,4BAA4B;YAC5B,0NAA0N,CAC7N,CAAC;KACH;IAED,OAAO,SAAS,CAAC;AACnB,CAAC;AAzFD,kEAyFC;AAEM,KAAK,UAAU,YAAY,CAChC,QAAkB,EAClB,MAA0B,EAC1B,MAAc;IAEd,MAAM,CAAC,UAAU,CAAC,qCAAqC,QAAQ,OAAO,CAAC,CAAC;IACxE,MAAM,MAAM,GAAG,MAAM,IAAA,kBAAS,EAAC,MAAM,CAAC,SAAS,CAAC,CAAC;IACjD,MAAM,MAAM,CAAC,YAAY,CAAC,QAAQ,CAAC,CAAC;IACpC,MAAM,CAAC,QAAQ,EAAE,CAAC;AACpB,CAAC;AATD,oCASC"}
\ No newline at end of file
diff --git a/lib/runner.js b/lib/runner.js
index c85caee849..f77e4c995d 100644
--- a/lib/runner.js
+++ b/lib/runner.js
@@ -221,19 +221,22 @@ program
         }
         await (0, util_1.enrichEnvironment)(util_1.Mode.runner, await (0, codeql_1.getCodeQL)(config.codeQLCmd));
         importTracerEnvironment(config);
-        let language = undefined;
+        let languages = undefined;
         if (cmd.language !== undefined) {
-            language = (0, languages_1.parseLanguage)(cmd.language);
+            const language = (0, languages_1.parseLanguage)(cmd.language);
             if (language === undefined || !config.languages.includes(language)) {
                 throw new Error(`"${cmd.language}" is not a recognised language. ` +
                     `Known languages in this project are ${config.languages.join(", ")}.`);
             }
+            languages = [language];
         }
         else {
-            language = await (0, autobuild_1.determineAutobuildLanguage)(config, (0, feature_flags_1.createFeatureFlags)([]), logger);
+            languages = await (0, autobuild_1.determineAutobuildLanguages)(config, (0, feature_flags_1.createFeatureFlags)([]), logger);
         }
-        if (language !== undefined) {
-            await (0, autobuild_1.runAutobuild)(language, config, logger);
+        if (languages !== undefined) {
+            for (const language of languages) {
+                await (0, autobuild_1.runAutobuild)(language, config, logger);
+            }
         }
     }
     catch (e) {
diff --git a/lib/runner.js.map b/lib/runner.js.map
index c1aedf903c..ee2f9db687 100644
--- a/lib/runner.js.map
+++ b/lib/runner.js.map
@@ -1 +1 @@
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\ No newline at end of file
diff --git a/lib/util.js b/lib/util.js
index c63eef79a3..21e9eabd61 100644
--- a/lib/util.js
+++ b/lib/util.js
@@ -22,7 +22,7 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.isGoExtractionReconciliationEnabled = exports.listFolder = exports.doesDirectoryExist = exports.useCodeScanningConfigInCli = exports.isInTestMode = exports.checkActionVersion = exports.getMlPoweredJsQueriesStatus = exports.getMlPoweredJsQueriesPack = exports.ML_POWERED_JS_QUERIES_PACK_NAME = exports.isGoodVersion = exports.delay = exports.bundleDb = exports.codeQlVersionAbove = exports.getCachedCodeQlVersion = exports.cacheCodeQlVersion = exports.isGitHubGhesVersionBelow = exports.isHTTPError = exports.UserError = exports.HTTPError = exports.getRequiredEnvParam = exports.isActions = exports.getMode = exports.enrichEnvironment = exports.initializeEnvironment = exports.Mode = exports.assertNever = exports.getGitHubAuth = exports.apiVersionInRange = exports.DisallowedAPIVersionReason = exports.checkGitHubVersionInRange = exports.getGitHubVersion = exports.GitHubVariant = exports.parseGitHubUrl = exports.getCodeQLDatabasePath = exports.getThreadsFlag = exports.getThreadsFlagValue = exports.getAddSnippetsFlag = exports.getMemoryFlag = exports.getMemoryFlagValue = exports.withTmpDir = exports.getToolNames = exports.getExtraOptionsEnvParam = exports.DEFAULT_DEBUG_DATABASE_NAME = exports.DEFAULT_DEBUG_ARTIFACT_NAME = exports.GITHUB_DOTCOM_URL = void 0;
+exports.isGoExtractionReconciliationEnabled = exports.listFolder = exports.doesDirectoryExist = exports.useCodeScanningConfigInCli = exports.isInTestMode = exports.checkActionVersion = exports.getMlPoweredJsQueriesStatus = exports.getMlPoweredJsQueriesPack = exports.ML_POWERED_JS_QUERIES_PACK_NAME = exports.isGoodVersion = exports.delay = exports.bundleDb = exports.codeQlVersionAbove = exports.getCachedCodeQlVersion = exports.cacheCodeQlVersion = exports.isGitHubGhesVersionBelow = exports.isHTTPError = exports.UserError = exports.HTTPError = exports.getRequiredEnvParam = exports.isActions = exports.getMode = exports.enrichEnvironment = exports.initializeEnvironment = exports.Mode = exports.assertNever = exports.getGitHubAuth = exports.apiVersionInRange = exports.DisallowedAPIVersionReason = exports.checkGitHubVersionInRange = exports.getGitHubVersion = exports.GitHubVariant = exports.parseGitHubUrl = exports.getCodeQLDatabasePath = exports.getThreadsFlag = exports.getThreadsFlagValue = exports.getAddSnippetsFlag = exports.getMemoryFlag = exports.getMemoryFlagValue = exports.withTmpDir = exports.getToolNames = exports.getExtraOptionsEnvParam = exports.DID_AUTOBUILD_GO_ENV_VAR_NAME = exports.DEFAULT_DEBUG_DATABASE_NAME = exports.DEFAULT_DEBUG_ARTIFACT_NAME = exports.GITHUB_DOTCOM_URL = void 0;
 const fs = __importStar(require("fs"));
 const os = __importStar(require("os"));
 const path = __importStar(require("path"));
@@ -52,6 +52,11 @@ exports.DEFAULT_DEBUG_ARTIFACT_NAME = "debug-artifacts";
  * Default name of the database in the debugging artifact.
  */
 exports.DEFAULT_DEBUG_DATABASE_NAME = "db";
+/**
+ * Environment variable that is set to "true" when the CodeQL Action has invoked
+ * the Go autobuilder.
+ */
+exports.DID_AUTOBUILD_GO_ENV_VAR_NAME = "CODEQL_ACTION_DID_AUTOBUILD_GOLANG";
 /**
  * Get the extra options for the codeql commands.
  */
diff --git a/lib/util.js.map b/lib/util.js.map
index f6e108111b..bc0ecda5bb 100644
--- a/lib/util.js.map
+++ b/lib/util.js.map
@@ -1 +1 @@
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\ No newline at end of file
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\ No newline at end of file
diff --git a/src/analyze-action.ts b/src/analyze-action.ts
index cde1d3c05e..fc20e97730 100644
--- a/src/analyze-action.ts
+++ b/src/analyze-action.ts
@@ -133,7 +133,7 @@ function doesGoExtractionOutputExist(config: Config): boolean {
  * steps.
  *
  * - We detect whether an autobuild step is present by checking the
- * `CODEQL_ACTION_DID_AUTOBUILD_GOLANG` environment variable, which is set
+ * `util.DID_AUTOBUILD_GO_ENV_VAR_NAME` environment variable, which is set
  * when the autobuilder is invoked.
  * - We approximate whether manual build steps are present by looking at
  * whether any extraction output already exists for Go.
@@ -152,7 +152,7 @@ async function runAutobuildIfLegacyGoWorkflow(
     );
     return;
   }
-  if (process.env["CODEQL_ACTION_DID_AUTOBUILD_GOLANG"] === "true") {
+  if (process.env[util.DID_AUTOBUILD_GO_ENV_VAR_NAME] === "true") {
     // This log line is info level while Go extraction reconciliation is in beta.
     // We will make it debug level once Go extraction reconciliation is GA.
     logger.info("Won't run Go autobuild since it has already been run.");
diff --git a/src/autobuild-action.ts b/src/autobuild-action.ts
index fb9e49260d..4778ab3ee0 100644
--- a/src/autobuild-action.ts
+++ b/src/autobuild-action.ts
@@ -9,13 +9,14 @@ import {
   StatusReportBase,
 } from "./actions-util";
 import { getApiDetails, getGitHubVersionActionsOnly } from "./api-client";
-import { determineAutobuildLanguage, runAutobuild } from "./autobuild";
+import { determineAutobuildLanguages, runAutobuild } from "./autobuild";
 import * as configUtils from "./config-utils";
 import { GitHubFeatureFlags } from "./feature-flags";
 import { Language } from "./languages";
 import { getActionsLogger } from "./logging";
 import { parseRepositoryNwo } from "./repository";
 import {
+  DID_AUTOBUILD_GO_ENV_VAR_NAME,
   checkActionVersion,
   checkGitHubVersionInRange,
   getRequiredEnvParam,
@@ -61,7 +62,8 @@ async function run() {
   const startedAt = new Date();
   const logger = getActionsLogger();
   await checkActionVersion(pkg.version);
-  let language: Language | undefined = undefined;
+  let currentLanguage: Language | undefined = undefined;
+  let languages: Language[] | undefined = undefined;
   try {
     if (
       !(await sendStatusReport(
@@ -88,8 +90,8 @@ async function run() {
       );
     }
 
-    language = await determineAutobuildLanguage(config, featureFlags, logger);
-    if (language !== undefined) {
+    languages = await determineAutobuildLanguages(config, featureFlags, logger);
+    if (languages !== undefined) {
       const workingDirectory = getOptionalInput("working-directory");
       if (workingDirectory) {
         logger.info(
@@ -97,9 +99,12 @@ async function run() {
         );
         process.chdir(workingDirectory);
       }
-      await runAutobuild(language, config, logger);
-      if (language === Language.go) {
-        core.exportVariable("CODEQL_ACTION_DID_AUTOBUILD_GOLANG", "true");
+      for (const language of languages) {
+        currentLanguage = language;
+        await runAutobuild(language, config, logger);
+        if (language === Language.go) {
+          core.exportVariable(DID_AUTOBUILD_GO_ENV_VAR_NAME, "true");
+        }
       }
     }
   } catch (error) {
@@ -111,14 +116,14 @@ async function run() {
     console.log(error);
     await sendCompletedStatusReport(
       startedAt,
-      language ? [language] : [],
-      language,
+      languages ?? [],
+      currentLanguage,
       error instanceof Error ? error : new Error(String(error))
     );
     return;
   }
 
-  await sendCompletedStatusReport(startedAt, language ? [language] : []);
+  await sendCompletedStatusReport(startedAt, languages ?? []);
 }
 
 async function runWrapper() {
diff --git a/src/autobuild.ts b/src/autobuild.ts
index f917f238e7..e712952b5f 100644
--- a/src/autobuild.ts
+++ b/src/autobuild.ts
@@ -5,11 +5,11 @@ import { Language, isTracedLanguage } from "./languages";
 import { Logger } from "./logging";
 import * as util from "./util";
 
-export async function determineAutobuildLanguage(
+export async function determineAutobuildLanguages(
   config: configUtils.Config,
   featureFlags: FeatureFlags,
   logger: Logger
-): Promise<Language | undefined> {
+): Promise<Language[] | undefined> {
   const isGoExtractionReconciliationEnabled =
     await util.isGoExtractionReconciliationEnabled(featureFlags);
   // Attempt to find a language to autobuild
@@ -19,26 +19,81 @@ export async function determineAutobuildLanguage(
   const autobuildLanguages = config.languages.filter((l) =>
     isTracedLanguage(l, isGoExtractionReconciliationEnabled, logger)
   );
-  const language = autobuildLanguages[0];
 
-  if (!language) {
+  if (!autobuildLanguages) {
     logger.info(
       "None of the languages in this project require extra build steps"
     );
     return undefined;
   }
 
-  logger.debug(`Detected dominant traced language: ${language}`);
+  /**
+   * Additionally autobuild Go in the autobuild Action to ensure backwards
+   * compatibility for users performing a multi-language build within a single
+   * job.
+   *
+   * For example, consider a user with the following workflow file:
+   *
+   * ```yml
+   * - uses: github/codeql-action/init@v2
+   *   with:
+   *     languages: go, java
+   * - uses: github/codeql-action/autobuild@v2
+   * - uses: github/codeql-action/analyze@v2
+   * ```
+   *
+   * - With Go extraction disabled, we will run the Java autobuilder in the
+   *   autobuild Action, ensuring we extract both Java and Go code.
+   * - With Go extraction enabled, taking the previous behavior we'd run the Go
+   *   autobuilder, since Go is first on the list of languages. We wouldn't run
+   *   the Java autobuilder at all and so we'd only extract Go code.
+   *
+   * We therefore introduce a special case here such that we'll autobuild Go
+   * in addition to the primary non-Go traced language in the autobuild Action.
+   *
+   * This special case behavior should be removed as part of the next major
+   * version of the CodeQL Action.
+   */
+  const autobuildLanguagesWithoutGo = autobuildLanguages.filter(
+    (l) => l !== Language.go
+  );
+
+  const languages: Language[] = [];
+  // First run the autobuilder for the first non-Go traced language, if one
+  // exists.
+  if (autobuildLanguagesWithoutGo[0] !== undefined) {
+    languages.push(autobuildLanguagesWithoutGo[0]);
+  }
+  // If Go is requested, run the Go autobuilder last to ensure it doesn't
+  // interfere with the other autobuilder.
+  if (autobuildLanguages.length !== autobuildLanguagesWithoutGo.length) {
+    languages.push(Language.go);
+  }
+
+  logger.debug(`Will autobuild ${languages.join(" and ")}.`);
 
-  if (autobuildLanguages.length > 1) {
+  // In general the autobuilders for other traced languages may conflict with
+  // each other. Therefore if a user has requested more than one non-Go traced
+  // language, we ask for manual build steps.
+  // Matrixing the build would also work, but that would change the SARIF
+  // categories, potentially leading to a "stale tips" situation where alerts
+  // that should be fixed remain on a repo since they are linked to SARIF
+  // categories that are no longer updated.
+  if (autobuildLanguagesWithoutGo.length > 1) {
     logger.warning(
-      `We will only automatically build ${language} code. If you wish to scan ${autobuildLanguages
+      `We will only automatically build ${languages.join(
+        " and "
+      )} code. If you wish to scan ${autobuildLanguagesWithoutGo
         .slice(1)
-        .join(" and ")}, you must replace this call with custom build steps.`
+        .join(
+          " and "
+        )}, you must replace the autobuild step of your workflow with custom build steps. ` +
+        "For more information, see " +
+        "https://docs.github.com/en/code-security/code-scanning/automatically-scanning-your-code-for-vulnerabilities-and-errors/configuring-the-codeql-workflow-for-compiled-languages#adding-build-steps-for-a-compiled-language"
     );
   }
 
-  return language;
+  return languages;
 }
 
 export async function runAutobuild(
diff --git a/src/runner.ts b/src/runner.ts
index 978b2f64e2..6fbfbe8c01 100644
--- a/src/runner.ts
+++ b/src/runner.ts
@@ -5,7 +5,7 @@ import { Command } from "commander";
 import del from "del";
 
 import { runFinalize, runQueries } from "./analyze";
-import { determineAutobuildLanguage, runAutobuild } from "./autobuild";
+import { determineAutobuildLanguages, runAutobuild } from "./autobuild";
 import { CodeQL, CODEQL_VERSION_NEW_TRACING, getCodeQL } from "./codeql";
 import { Config, getConfig } from "./config-utils";
 import { createFeatureFlags } from "./feature-flags";
@@ -362,9 +362,9 @@ program
       }
       await enrichEnvironment(Mode.runner, await getCodeQL(config.codeQLCmd));
       importTracerEnvironment(config);
-      let language: Language | undefined = undefined;
+      let languages: Language[] | undefined = undefined;
       if (cmd.language !== undefined) {
-        language = parseLanguage(cmd.language);
+        const language = parseLanguage(cmd.language);
         if (language === undefined || !config.languages.includes(language)) {
           throw new Error(
             `"${cmd.language}" is not a recognised language. ` +
@@ -373,15 +373,18 @@ program
               )}.`
           );
         }
+        languages = [language];
       } else {
-        language = await determineAutobuildLanguage(
+        languages = await determineAutobuildLanguages(
           config,
           createFeatureFlags([]),
           logger
         );
       }
-      if (language !== undefined) {
-        await runAutobuild(language, config, logger);
+      if (languages !== undefined) {
+        for (const language of languages) {
+          await runAutobuild(language, config, logger);
+        }
       }
     } catch (e) {
       logger.error("Autobuild failed");
diff --git a/src/util.ts b/src/util.ts
index 87ea55ecea..678d35f308 100644
--- a/src/util.ts
+++ b/src/util.ts
@@ -45,6 +45,13 @@ export const DEFAULT_DEBUG_ARTIFACT_NAME = "debug-artifacts";
  */
 export const DEFAULT_DEBUG_DATABASE_NAME = "db";
 
+/**
+ * Environment variable that is set to "true" when the CodeQL Action has invoked
+ * the Go autobuilder.
+ */
+export const DID_AUTOBUILD_GO_ENV_VAR_NAME =
+  "CODEQL_ACTION_DID_AUTOBUILD_GOLANG";
+
 export interface SarifFile {
   version?: string | null;
   runs: Array<{