Doxyfile

# Doxyfile 1.8.11

# This file describes the settings to be used by the documentation system
# doxygen (www.doxygen.org) for a project.
#
# All text after a double hash (##) is considered a comment and is placed in
# front of the TAG it is preceding.
#
# All text after a single hash (#) is considered a comment and will be ignored.
# The format is:
# TAG = value [value, ...]
# For lists, items can also be appended using:
# TAG += value [value, ...]
# Values that contain spaces should be placed between quotes (\" \").

#---------------------------------------------------------------------------
# Project related configuration options
#---------------------------------------------------------------------------

DOXYFILE_ENCODING      = UTF-8

PROJECT_NAME           = "Playfair Cracker"

# The PROJECT_NUMBER tag can be used to enter a project or revision number. This
# could be handy for archiving the generated documentation or if some version
# control system is used.

PROJECT_NUMBER         =

# Using the PROJECT_BRIEF tag one can provide an optional one line description
# for a project that appears at the top of each page and should give viewer a
# quick idea about the purpose of the project. Keep the description short.

PROJECT_BRIEF          =


PROJECT_LOGO           =




OUTPUT_DIRECTORY       =

# The default value is: NO.

CREATE_SUBDIRS         = NO

ALLOW_UNICODE_NAMES    = NO

OUTPUT_LANGUAGE        = English

# If the BRIEF_MEMBER_DESC tag is set to YES, doxygen will include brief member
# descriptions after the members that are listed in the file and class
# documentation (similar to Javadoc). Set to NO to disable this.
# The default value is: YES.

BRIEF_MEMBER_DESC      = YES

REPEAT_BRIEF           = NO

# This tag implements a quasi-intelligent brief description abbreviator that is
# used to form the text in various listings. Each string in this list, if found
# as the leading text of the brief description, will be stripped from the text
# and the result, after processing the whole list, is used as the annotated
# text. Otherwise, the brief description is used as-is. If left blank, the
# following values are used ($name is automatically replaced with the name of
# the entity):The $name class, The $name widget, The $name file, is, provides,
# specifies, contains, represents, a, an and the.

ABBREVIATE_BRIEF       =

# If the ALWAYS_DETAILED_SEC and REPEAT_BRIEF tags are both set to YES then
# doxygen will generate a detailed section even if there is only a brief
# description.
# The default value is: NO.

ALWAYS_DETAILED_SEC    = YES
INLINE_INHERITED_MEMB  = NO
FULL_PATH_NAMES        = YES
STRIP_FROM_PATH        =
STRIP_FROM_INC_PATH    =
SHORT_NAMES            = NO
JAVADOC_AUTOBRIEF      = NO
QT_AUTOBRIEF           = NO

# The MULTILINE_CPP_IS_BRIEF tag can be set to YES to make doxygen treat a
# multi-line C++ special comment block (i.e. a block of //! or /// comments) as
# a brief description. This used to be the default behavior. The new default is
# to treat a multi-line C++ comment block as a detailed description. Set this
# tag to YES if you prefer the old behavior instead.
#
# Note that setting this tag to YES also means that rational rose comments are
# not recognized any more.
# The default value is: NO.

MULTILINE_CPP_IS_BRIEF = NO


INHERIT_DOCS           = YES


SEPARATE_MEMBER_PAGES  = NO

TAB_SIZE               = 4

# This tag can be used to specify a number of aliases that act as commands in
# the documentation. An alias has the form:
# name=value
# For example adding
# "sideeffect=@par Side Effects:\n"
# will allow you to put the command \sideeffect (or @sideeffect) in the
# documentation, which will result in a user-defined paragraph with heading
# "Side Effects:". You can put \n's in the value part of an alias to insert
# newlines.

ALIASES                =


TCL_SUBST              =


OPTIMIZE_OUTPUT_FOR_C  = NO


OPTIMIZE_OUTPUT_JAVA   = NO


OPTIMIZE_FOR_FORTRAN   = NO


OPTIMIZE_OUTPUT_VHDL   = NO


EXTENSION_MAPPING      =
MARKDOWN_SUPPORT       = YES
AUTOLINK_SUPPORT       = YES
BUILTIN_STL_SUPPORT    = YES




CPP_CLI_SUPPORT        = NO
SIP_SUPPORT            = NO
IDL_PROPERTY_SUPPORT   = YES
DISTRIBUTE_GROUP_DOC   = NO
GROUP_NESTED_COMPOUNDS = NO
SUBGROUPING            = YES
INLINE_GROUPED_CLASSES = NO

# When the INLINE_SIMPLE_STRUCTS tag is set to YES, structs, classes, and unions
# with only public data fields or simple typedef fields will be shown inline in
# the documentation of the scope in which they are defined (i.e. file,
# namespace, or group documentation), provided this scope is documented. If set
# to NO, structs, classes, and unions are shown on a separate page (for HTML and
# Man pages) or section (for LaTeX and RTF).
# The default value is: NO.

INLINE_SIMPLE_STRUCTS  = NO


TYPEDEF_HIDES_STRUCT   = NO


LOOKUP_CACHE_SIZE      = 0

#---------------------------------------------------------------------------
# Build related configuration options
#---------------------------------------------------------------------------


EXTRACT_ALL            = YES
EXTRACT_PRIVATE        = YES
EXTRACT_PACKAGE        = NO
EXTRACT_STATIC         = YES
EXTRACT_LOCAL_CLASSES  = YES


EXTRACT_LOCAL_METHODS  = NO


EXTRACT_ANON_NSPACES   = NO


HIDE_UNDOC_MEMBERS     = NO


HIDE_UNDOC_CLASSES     = NO


HIDE_FRIEND_COMPOUNDS  = NO


HIDE_IN_BODY_DOCS      = NO


INTERNAL_DOCS          = YES


CASE_SENSE_NAMES       = YES


HIDE_SCOPE_NAMES       = NO


HIDE_COMPOUND_REFERENCE= NO


SHOW_INCLUDE_FILES     = NO


SHOW_GROUPED_MEMB_INC  = NO


FORCE_LOCAL_INCLUDES   = YES


INLINE_INFO            = YES


SORT_MEMBER_DOCS       = NO


SORT_BRIEF_DOCS        = NO


SORT_MEMBERS_CTORS_1ST = NO


SORT_GROUP_NAMES       = NO


SORT_BY_SCOPE_NAME     = NO


STRICT_PROTO_MATCHING  = NO


GENERATE_TODOLIST      = YES


GENERATE_TESTLIST      = YES


GENERATE_BUGLIST       = YES


GENERATE_DEPRECATEDLIST= YES


ENABLED_SECTIONS       =

# The MAX_INITIALIZER_LINES tag determines the maximum number of lines that the
# initial value of a variable or macro / define can have for it to appear in the
# documentation. If the initializer consists of more lines than specified here
# it will be hidden. Use a value of 0 to hide initializers completely. The
# appearance of the value of individual variables and macros / defines can be
# controlled using \showinitializer or \hideinitializer command in the
# documentation regardless of this setting.
# Minimum value: 0, maximum value: 10000, default value: 30.

MAX_INITIALIZER_LINES  = 30


SHOW_USED_FILES        = YES


SHOW_FILES             = YES




SHOW_NAMESPACES        = YES


FILE_VERSION_FILTER    =


LAYOUT_FILE            =


CITE_BIB_FILES         =

#---------------------------------------------------------------------------
# Configuration options related to warning and progress messages
#---------------------------------------------------------------------------


QUIET                  = YES


WARNINGS               = YES


WARN_IF_UNDOCUMENTED   = YES


WARN_IF_DOC_ERROR      = YES


WARN_NO_PARAMDOC       = YES


WARN_AS_ERROR          = NO


WARN_FORMAT            = "$file:$line: $text"


WARN_LOGFILE           = 

#---------------------------------------------------------------------------
# Configuration options related to the input files
#---------------------------------------------------------------------------



INPUT                  = include/ src/


INPUT_ENCODING         = UTF-8


FILE_PATTERNS          =


RECURSIVE              = NO


EXCLUDE                = include/optionparser.h 

EXCLUDE_SYMLINKS       = NO

EXCLUDE_PATTERNS       = */src/playfair* */include/pcg*

# The EXCLUDE_SYMBOLS tag can be used to specify one or more symbol names
# (namespaces, classes, functions, etc.) that should be excluded from the
# output. The symbol name can be a fully qualified name, a word, or if the
# wildcard * is used, a substring. Examples: ANamespace, AClass,
# AClass::ANamespace, ANamespace::*Test
#
# Note that the wildcards are matched against the file with absolute path, so to
# exclude all test directories use the pattern */test/*

EXCLUDE_SYMBOLS        =


EXAMPLE_PATH           = example/


EXAMPLE_PATTERNS       =


EXAMPLE_RECURSIVE      = NO


IMAGE_PATH             =


INPUT_FILTER           =


FILTER_PATTERNS        =


FILTER_SOURCE_FILES    = NO


FILTER_SOURCE_PATTERNS =


USE_MDFILE_AS_MAINPAGE =

#---------------------------------------------------------------------------
# Configuration options related to source browsing
#---------------------------------------------------------------------------

# If the SOURCE_BROWSER tag is set to YES then a list of source files will be
# generated. Documented entities will be cross-referenced with these sources.
#
# Note: To get rid of all source code in the generated output, make sure that
# also VERBATIM_HEADERS is set to NO.
# The default value is: NO.

SOURCE_BROWSER         = NO


INLINE_SOURCES         = NO


STRIP_CODE_COMMENTS    = YES

# If the REFERENCED_BY_RELATION tag is set to YES then for each documented
# function all documented functions referencing it will be listed.
# The default value is: NO.

REFERENCED_BY_RELATION = NO

# If the REFERENCES_RELATION tag is set to YES then for each documented function
# all documented entities called/used by that function will be listed.
# The default value is: NO.

REFERENCES_RELATION    = NO

# If the REFERENCES_LINK_SOURCE tag is set to YES and SOURCE_BROWSER tag is set
# to YES then the hyperlinks from functions in REFERENCES_RELATION and
# REFERENCED_BY_RELATION lists will link to the source code. Otherwise they will
# link to the documentation.
# The default value is: YES.

REFERENCES_LINK_SOURCE = YES

# If SOURCE_TOOLTIPS is enabled (the default) then hovering a hyperlink in the
# source code will show a tooltip with additional information such as prototype,
# brief description and links to the definition and documentation. Since this
# will make the HTML file larger and loading of large files a bit slower, you
# can opt to disable this feature.
# The default value is: YES.
# This tag requires that the tag SOURCE_BROWSER is set to YES.

SOURCE_TOOLTIPS        = YES


USE_HTAGS              = NO

# If the VERBATIM_HEADERS tag is set the YES then doxygen will generate a
# verbatim copy of the header file for each class for which an include is
# specified. Set to NO to disable this.
# See also: Section \class.
# The default value is: YES.

VERBATIM_HEADERS       = YES


CLANG_ASSISTED_PARSING = NO


CLANG_OPTIONS          =

#---------------------------------------------------------------------------
# Configuration options related to the alphabetical class index
#---------------------------------------------------------------------------

# If the ALPHABETICAL_INDEX tag is set to YES, an alphabetical index of all
# compounds will be generated. Enable this if the project contains a lot of
# classes, structs, unions or interfaces.
# The default value is: YES.

ALPHABETICAL_INDEX     = YES

# The COLS_IN_ALPHA_INDEX tag can be used to specify the number of columns in
# which the alphabetical index list will be split.
# Minimum value: 1, maximum value: 20, default value: 5.
# This tag requires that the tag ALPHABETICAL_INDEX is set to YES.

COLS_IN_ALPHA_INDEX    = 5

# In case all classes in a project start with a common prefix, all classes will
# be put under the same header in the alphabetical index. The IGNORE_PREFIX tag
# can be used to specify a prefix (or a list of prefixes) that should be ignored
# while generating the index headers.
# This tag requires that the tag ALPHABETICAL_INDEX is set to YES.

IGNORE_PREFIX          =

#---------------------------------------------------------------------------
# Configuration options related to the HTML output
#---------------------------------------------------------------------------
GENERATE_HTML          = YES
HTML_OUTPUT            = source_html
HTML_FILE_EXTENSION    = .html
HTML_HEADER            =
HTML_FOOTER            =
HTML_STYLESHEET        =
HTML_EXTRA_STYLESHEET  =
HTML_EXTRA_FILES       =
HTML_COLORSTYLE_HUE    = 220
HTML_COLORSTYLE_SAT    = 100
HTML_COLORSTYLE_GAMMA  = 80
HTML_TIMESTAMP         = NO





HTML_DYNAMIC_SECTIONS  = YES
HTML_INDEX_NUM_ENTRIES = 100
GENERATE_DOCSET        = NO
DOCSET_FEEDNAME        = "Doxygen generated docs"
DOCSET_BUNDLE_ID       = org.doxygen.Project
DOCSET_PUBLISHER_ID    = org.doxygen.Publisher
DOCSET_PUBLISHER_NAME  = Publisher
GENERATE_HTMLHELP      = NO
CHM_FILE               =
HHC_LOCATION           =
GENERATE_CHI           = NO
CHM_INDEX_ENCODING     =
BINARY_TOC             = NO
TOC_EXPAND             = NO
GENERATE_QHP           = NO
QCH_FILE               =
QHP_NAMESPACE          = org.doxygen.Project
QHP_VIRTUAL_FOLDER     = doc
QHP_CUST_FILTER_NAME   =
QHP_CUST_FILTER_ATTRS  =
QHP_SECT_FILTER_ATTRS  =
QHG_LOCATION           =
GENERATE_ECLIPSEHELP   = NO
ECLIPSE_DOC_ID         = org.doxygen.Project
DISABLE_INDEX          = NO
GENERATE_TREEVIEW      = NO
ENUM_VALUES_PER_LINE   = 4
TREEVIEW_WIDTH         = 250
EXT_LINKS_IN_WINDOW    = NO

# Use this tag to change the font size of LaTeX formulas included as images in
# the HTML documentation. When you change the font size after a successful
# doxygen run you need to manually remove any form_*.png images from the HTML
# output directory to force them to be regenerated.
# Minimum value: 8, maximum value: 50, default value: 10.
# This tag requires that the tag GENERATE_HTML is set to YES.

FORMULA_FONTSIZE       = 10

# Use the FORMULA_TRANPARENT tag to determine whether or not the images
# generated for formulas are transparent PNGs. Transparent PNGs are not
# supported properly for IE 6.0, but are supported on all modern browsers.
#
# Note that when changing this option you need to delete any form_*.png files in
# the HTML output directory before the changes have effect.
# The default value is: YES.
# This tag requires that the tag GENERATE_HTML is set to YES.

FORMULA_TRANSPARENT    = YES
USE_MATHJAX            = NO
MATHJAX_FORMAT         = HTML-CSS
MATHJAX_RELPATH        = http://cdn.mathjax.org/mathjax/latest
MATHJAX_EXTENSIONS     =
MATHJAX_CODEFILE       =


SEARCHENGINE           = YES
SERVER_BASED_SEARCH    = NO
EXTERNAL_SEARCH        = NO
SEARCHENGINE_URL       =
SEARCHDATA_FILE        = searchdata.xml
EXTERNAL_SEARCH_ID     =
EXTRA_SEARCH_MAPPINGS  =

#---------------------------------------------------------------------------
# Configuration options related to the LaTeX output
#---------------------------------------------------------------------------
GENERATE_LATEX         = NO
LATEX_OUTPUT           = latex
LATEX_CMD_NAME         = latex
MAKEINDEX_CMD_NAME     = makeindex
COMPACT_LATEX          = NO
PAPER_TYPE             = a4
EXTRA_PACKAGES         =
LATEX_HEADER           =
LATEX_FOOTER           =
LATEX_EXTRA_STYLESHEET =
LATEX_EXTRA_FILES      =
PDF_HYPERLINKS         = YES
USE_PDFLATEX           = YES
LATEX_BATCHMODE        = NO
LATEX_HIDE_INDICES     = NO
LATEX_SOURCE_CODE      = NO
LATEX_BIB_STYLE        = plain
LATEX_TIMESTAMP        = NO

#---------------------------------------------------------------------------
# Configuration options related to the RTF output
#---------------------------------------------------------------------------
GENERATE_RTF           = NO
RTF_OUTPUT             = rtf
COMPACT_RTF            = NO
RTF_HYPERLINKS         = NO
RTF_STYLESHEET_FILE    =
RTF_EXTENSIONS_FILE    =
RTF_SOURCE_CODE        = NO

#---------------------------------------------------------------------------
# Configuration options related to the man page output
#---------------------------------------------------------------------------

# If the GENERATE_MAN tag is set to YES, doxygen will generate man pages for
# classes and files.
# The default value is: NO.

GENERATE_MAN           = NO

# The MAN_OUTPUT tag is used to specify where the man pages will be put. If a
# relative path is entered the value of OUTPUT_DIRECTORY will be put in front of
# it. A directory man3 will be created inside the directory specified by
# MAN_OUTPUT.
# The default directory is: man.
# This tag requires that the tag GENERATE_MAN is set to YES.

MAN_OUTPUT             = man

# The MAN_EXTENSION tag determines the extension that is added to the generated
# man pages. In case the manual section does not start with a number, the number
# 3 is prepended. The dot (.) at the beginning of the MAN_EXTENSION tag is
# optional.
# The default value is: .3.
# This tag requires that the tag GENERATE_MAN is set to YES.

MAN_EXTENSION          = .3

# The MAN_SUBDIR tag determines the name of the directory created within
# MAN_OUTPUT in which the man pages are placed. If defaults to man followed by
# MAN_EXTENSION with the initial . removed.
# This tag requires that the tag GENERATE_MAN is set to YES.

MAN_SUBDIR             =

# If the MAN_LINKS tag is set to YES and doxygen generates man output, then it
# will generate one additional man file for each entity documented in the real
# man page(s). These additional files only source the real man page, but without
# them the man command would be unable to find the correct page.
# The default value is: NO.
# This tag requires that the tag GENERATE_MAN is set to YES.

MAN_LINKS              = NO

#---------------------------------------------------------------------------
# Configuration options related to the XML output
#---------------------------------------------------------------------------
GENERATE_XML           = NO
XML_OUTPUT             = xml
XML_PROGRAMLISTING     = YES

#---------------------------------------------------------------------------
# Configuration options related to the DOCBOOK output
#---------------------------------------------------------------------------
GENERATE_DOCBOOK       = NO
DOCBOOK_OUTPUT         = docbook
DOCBOOK_PROGRAMLISTING = NO

#---------------------------------------------------------------------------
# Configuration options for the AutoGen Definitions output
#---------------------------------------------------------------------------
GENERATE_AUTOGEN_DEF   = NO

#---------------------------------------------------------------------------
# Configuration options related to the Perl module output
#---------------------------------------------------------------------------
GENERATE_PERLMOD       = NO
PERLMOD_LATEX          = NO
PERLMOD_PRETTY         = YES
PERLMOD_MAKEVAR_PREFIX =

#---------------------------------------------------------------------------
# Configuration options related to the preprocessor
#---------------------------------------------------------------------------


ENABLE_PREPROCESSING   = YES


MACRO_EXPANSION        = NO


EXPAND_ONLY_PREDEF     = NO

# If the SEARCH_INCLUDES tag is set to YES, the include files in the
# INCLUDE_PATH will be searched if a #include is found.
# The default value is: YES.
# This tag requires that the tag ENABLE_PREPROCESSING is set to YES.

SEARCH_INCLUDES        = YES

# The INCLUDE_PATH tag can be used to specify one or more directories that
# contain include files that are not input files but should be processed by the
# preprocessor.
# This tag requires that the tag SEARCH_INCLUDES is set to YES.

INCLUDE_PATH           =

# You can use the INCLUDE_FILE_PATTERNS tag to specify one or more wildcard
# patterns (like *.h and *.hpp) to filter out the header-files in the
# directories. If left blank, the patterns specified with FILE_PATTERNS will be
# used.
# This tag requires that the tag ENABLE_PREPROCESSING is set to YES.

INCLUDE_FILE_PATTERNS  =


PREDEFINED             =


EXPAND_AS_DEFINED      =


SKIP_FUNCTION_MACROS   = YES

#---------------------------------------------------------------------------
# Configuration options related to external references
#---------------------------------------------------------------------------

# The TAGFILES tag can be used to specify one or more tag files. For each tag
# file the location of the external documentation should be added. The format of
# a tag file without this location is as follows:
# TAGFILES = file1 file2 ...
# Adding location for the tag files is done as follows:
# TAGFILES = file1=loc1 "file2 = loc2" ...
# where loc1 and loc2 can be relative or absolute paths or URLs. See the
# section "Linking to external documentation" for more information about the use
# of tag files.
# Note: Each tag file must have a unique name (where the name does NOT include
# the path). If a tag file is not located in the directory in which doxygen is
# run, you must also specify the path to the tagfile here.

TAGFILES               =

# When a file name is specified after GENERATE_TAGFILE, doxygen will create a
# tag file that is based on the input files it reads. See section "Linking to
# external documentation" for more information about the usage of tag files.

GENERATE_TAGFILE       =

# If the ALLEXTERNALS tag is set to YES, all external class will be listed in
# the class index. If set to NO, only the inherited external classes will be
# listed.
# The default value is: NO.

ALLEXTERNALS           = NO

# If the EXTERNAL_GROUPS tag is set to YES, all external groups will be listed
# in the modules index. If set to NO, only the current project's groups will be
# listed.
# The default value is: YES.

EXTERNAL_GROUPS        = YES

# If the EXTERNAL_PAGES tag is set to YES, all external pages will be listed in
# the related pages index. If set to NO, only the current project's pages will
# be listed.
# The default value is: YES.

EXTERNAL_PAGES         = YES

# The PERL_PATH should be the absolute path and name of the perl script
# interpreter (i.e. the result of 'which perl').
# The default file (with absolute path) is: /usr/bin/perl.

PERL_PATH              = /usr/bin/perl

#---------------------------------------------------------------------------
# Configuration options related to the dot tool
#---------------------------------------------------------------------------
CLASS_DIAGRAMS         = NO
MSCGEN_PATH            =
DIA_PATH               =
HIDE_UNDOC_RELATIONS   = YES
HAVE_DOT               = NO
DOT_NUM_THREADS        = 0
DOT_FONTNAME           = Helvetica
DOT_FONTSIZE           = 10
DOT_FONTPATH           =
CLASS_GRAPH            = YES
COLLABORATION_GRAPH    = YES
GROUP_GRAPHS           = YES
UML_LOOK               = NO
UML_LIMIT_NUM_FIELDS   = 10
TEMPLATE_RELATIONS     = NO
INCLUDE_GRAPH          = YES
INCLUDED_BY_GRAPH      = YES
CALL_GRAPH             = NO
CALLER_GRAPH           = NO
GRAPHICAL_HIERARCHY    = YES
DIRECTORY_GRAPH        = YES
DOT_IMAGE_FORMAT       = png
INTERACTIVE_SVG        = NO
DOT_PATH               =
DOTFILE_DIRS           =
MSCFILE_DIRS           =
DIAFILE_DIRS           =
PLANTUML_JAR_PATH      =
PLANTUML_INCLUDE_PATH  =
DOT_GRAPH_MAX_NODES    = 50
MAX_DOT_GRAPH_DEPTH    = 0
DOT_TRANSPARENT        = NO
DOT_MULTI_TARGETS      = NO
GENERATE_LEGEND        = YES
DOT_CLEANUP            = YES