/
data.py
959 lines (804 loc) · 29.2 KB
/
data.py
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# pylint: disable=too-many-arguments, too-many-branches
# pylint: disable=too-many-return-statements, import-error
'''Data dispatching for DMatrix.'''
import ctypes
import json
import warnings
import os
from typing import Any, Tuple, Callable, Optional, List
import numpy as np
from .core import c_array, _LIB, _check_call, c_str
from .core import _cuda_array_interface
from .core import DataIter, _ProxyDMatrix, DMatrix
from .compat import lazy_isinstance
c_bst_ulong = ctypes.c_uint64 # pylint: disable=invalid-name
CAT_T = "c"
def _warn_unused_missing(data, missing):
if (missing is not None) and (not np.isnan(missing)):
warnings.warn(
'`missing` is not used for current input data type:' +
str(type(data)), UserWarning)
def _check_complex(data):
'''Test whether data is complex using `dtype` attribute.'''
complex_dtypes = (np.complex128, np.complex64,
np.cfloat, np.cdouble, np.clongdouble)
if hasattr(data, 'dtype') and data.dtype in complex_dtypes:
raise ValueError('Complex data not supported')
def _check_data_shape(data: Any) -> None:
if hasattr(data, "shape") and len(data.shape) != 2:
raise ValueError("Please reshape the input data into 2-dimensional matrix.")
def _is_scipy_csr(data):
try:
import scipy
except ImportError:
scipy = None
return False
return isinstance(data, scipy.sparse.csr_matrix)
def _array_interface(data: np.ndarray) -> bytes:
assert (
data.dtype.hasobject is False
), "Input data contains `object` dtype. Expecting numeric data."
interface = data.__array_interface__
if "mask" in interface:
interface["mask"] = interface["mask"].__array_interface__
interface_str = bytes(json.dumps(interface), "utf-8")
return interface_str
def _from_scipy_csr(
data,
missing,
nthread,
feature_names: Optional[List[str]],
feature_types: Optional[List[str]],
):
"""Initialize data from a CSR matrix."""
if len(data.indices) != len(data.data):
raise ValueError(
"length mismatch: {} vs {}".format(len(data.indices), len(data.data))
)
handle = ctypes.c_void_p()
args = {
"missing": float(missing),
"nthread": int(nthread),
}
config = bytes(json.dumps(args), "utf-8")
_check_call(
_LIB.XGDMatrixCreateFromCSR(
_array_interface(data.indptr),
_array_interface(data.indices),
_array_interface(data.data),
ctypes.c_size_t(data.shape[1]),
config,
ctypes.byref(handle),
)
)
return handle, feature_names, feature_types
def _is_scipy_csc(data):
try:
import scipy
except ImportError:
scipy = None
return False
return isinstance(data, scipy.sparse.csc_matrix)
def _from_scipy_csc(
data,
missing,
feature_names: Optional[List[str]],
feature_types: Optional[List[str]],
):
if len(data.indices) != len(data.data):
raise ValueError('length mismatch: {} vs {}'.format(
len(data.indices), len(data.data)))
_warn_unused_missing(data, missing)
handle = ctypes.c_void_p()
_check_call(_LIB.XGDMatrixCreateFromCSCEx(
c_array(ctypes.c_size_t, data.indptr),
c_array(ctypes.c_uint, data.indices),
c_array(ctypes.c_float, data.data),
ctypes.c_size_t(len(data.indptr)),
ctypes.c_size_t(len(data.data)),
ctypes.c_size_t(data.shape[0]),
ctypes.byref(handle)))
return handle, feature_names, feature_types
def _is_scipy_coo(data):
try:
import scipy
except ImportError:
scipy = None
return False
return isinstance(data, scipy.sparse.coo_matrix)
def _is_numpy_array(data):
return isinstance(data, (np.ndarray, np.matrix))
def _ensure_np_dtype(data, dtype):
if data.dtype.hasobject or data.dtype in [np.float16, np.bool_]:
data = data.astype(np.float32, copy=False)
dtype = np.float32
return data, dtype
def _maybe_np_slice(data, dtype):
'''Handle numpy slice. This can be removed if we use __array_interface__.
'''
try:
if not data.flags.c_contiguous:
data = np.array(data, copy=True, dtype=dtype)
else:
data = np.array(data, copy=False, dtype=dtype)
except AttributeError:
data = np.array(data, copy=False, dtype=dtype)
data, dtype = _ensure_np_dtype(data, dtype)
return data
def _from_numpy_array(
data,
missing,
nthread,
feature_names: Optional[List[str]],
feature_types: Optional[List[str]],
):
"""Initialize data from a 2-D numpy matrix.
"""
if len(data.shape) != 2:
raise ValueError(
"Expecting 2 dimensional numpy.ndarray, got: ", data.shape
)
data, _ = _ensure_np_dtype(data, data.dtype)
handle = ctypes.c_void_p()
args = {
"missing": float(missing),
"nthread": int(nthread),
}
config = bytes(json.dumps(args), "utf-8")
_check_call(
_LIB.XGDMatrixCreateFromDense(
_array_interface(data),
config,
ctypes.byref(handle),
)
)
return handle, feature_names, feature_types
def _is_pandas_df(data):
try:
import pandas as pd
except ImportError:
return False
return isinstance(data, pd.DataFrame)
def _is_modin_df(data):
try:
import modin.pandas as pd
except ImportError:
return False
return isinstance(data, pd.DataFrame)
_pandas_dtype_mapper = {
'int8': 'int',
'int16': 'int',
'int32': 'int',
'int64': 'int',
'uint8': 'int',
'uint16': 'int',
'uint32': 'int',
'uint64': 'int',
'float16': 'float',
'float32': 'float',
'float64': 'float',
'bool': 'i',
}
def _transform_pandas_df(
data,
enable_categorical: bool,
feature_names: Optional[List[str]] = None,
feature_types: Optional[List[str]] = None,
meta=None,
meta_type=None,
):
import pandas as pd
from pandas.api.types import is_sparse, is_categorical_dtype
if not all(dtype.name in _pandas_dtype_mapper or is_sparse(dtype) or
(is_categorical_dtype(dtype) and enable_categorical)
for dtype in data.dtypes):
bad_fields = [
str(data.columns[i]) for i, dtype in enumerate(data.dtypes)
if dtype.name not in _pandas_dtype_mapper
]
msg = """DataFrame.dtypes for data must be int, float, bool or category. When
categorical type is supplied, DMatrix parameter `enable_categorical` must
be set to `True`."""
raise ValueError(msg + ', '.join(bad_fields))
# handle feature names
if feature_names is None and meta is None:
if isinstance(data.columns, pd.MultiIndex):
feature_names = [
' '.join([str(x) for x in i]) for i in data.columns
]
elif isinstance(data.columns, (pd.Int64Index, pd.RangeIndex)):
feature_names = list(map(str, data.columns))
else:
feature_names = data.columns.format()
# handle feature types
if feature_types is None and meta is None:
feature_types = []
for i, dtype in enumerate(data.dtypes):
if is_sparse(dtype):
feature_types.append(_pandas_dtype_mapper[dtype.subtype.name])
elif is_categorical_dtype(dtype) and enable_categorical:
feature_types.append(CAT_T)
else:
feature_types.append(_pandas_dtype_mapper[dtype.name])
# handle categorical codes.
transformed = pd.DataFrame()
if enable_categorical:
for i, dtype in enumerate(data.dtypes):
if is_categorical_dtype(dtype):
transformed[data.columns[i]] = data[data.columns[i]].cat.codes
else:
transformed[data.columns[i]] = data[data.columns[i]]
else:
transformed = data
if meta and len(data.columns) > 1:
raise ValueError(
'DataFrame for {meta} cannot have multiple columns'.format(
meta=meta)
)
dtype = meta_type if meta_type else np.float32
arr = transformed.values
if meta_type:
arr = arr.astype(meta_type)
return arr, feature_names, feature_types
def _from_pandas_df(
data,
enable_categorical: bool,
missing,
nthread,
feature_names: Optional[List[str]],
feature_types: Optional[List[str]],
):
data, feature_names, feature_types = _transform_pandas_df(
data, enable_categorical, feature_names, feature_types)
return _from_numpy_array(data, missing, nthread, feature_names,
feature_types)
def _is_pandas_series(data):
try:
import pandas as pd
except ImportError:
return False
return isinstance(data, pd.Series)
def _is_modin_series(data):
try:
import modin.pandas as pd
except ImportError:
return False
return isinstance(data, pd.Series)
def _from_pandas_series(
data,
missing,
nthread,
feature_types: Optional[List[str]],
feature_names: Optional[List[str]],
):
return _from_numpy_array(
data.values.astype("float"), missing, nthread, feature_names, feature_types
)
def _is_dt_df(data):
return lazy_isinstance(data, 'datatable', 'Frame') or \
lazy_isinstance(data, 'datatable', 'DataTable')
_dt_type_mapper = {'bool': 'bool', 'int': 'int', 'real': 'float'}
_dt_type_mapper2 = {'bool': 'i', 'int': 'int', 'real': 'float'}
def _transform_dt_df(
data,
feature_names: Optional[List[str]],
feature_types: Optional[List[str]],
meta=None,
meta_type=None,
):
"""Validate feature names and types if data table"""
if meta and data.shape[1] > 1:
raise ValueError(
'DataTable for label or weight cannot have multiple columns')
if meta:
# below requires new dt version
# extract first column
data = data.to_numpy()[:, 0].astype(meta_type)
return data, None, None
data_types_names = tuple(lt.name for lt in data.ltypes)
bad_fields = [data.names[i]
for i, type_name in enumerate(data_types_names)
if type_name not in _dt_type_mapper]
if bad_fields:
msg = """DataFrame.types for data must be int, float or bool.
Did not expect the data types in fields """
raise ValueError(msg + ', '.join(bad_fields))
if feature_names is None and meta is None:
feature_names = data.names
# always return stypes for dt ingestion
if feature_types is not None:
raise ValueError(
'DataTable has own feature types, cannot pass them in.')
feature_types = np.vectorize(_dt_type_mapper2.get)(
data_types_names).tolist()
return data, feature_names, feature_types
def _from_dt_df(
data,
missing,
nthread,
feature_names: Optional[List[str]],
feature_types: Optional[List[str]],
enable_categorical: bool,
) -> Tuple[ctypes.c_void_p, Optional[List[str]], Optional[List[str]]]:
if enable_categorical:
raise ValueError("categorical data in datatable is not supported yet.")
data, feature_names, feature_types = _transform_dt_df(
data, feature_names, feature_types, None, None)
ptrs = (ctypes.c_void_p * data.ncols)()
if hasattr(data, "internal") and hasattr(data.internal, "column"):
# datatable>0.8.0
for icol in range(data.ncols):
col = data.internal.column(icol)
ptr = col.data_pointer
ptrs[icol] = ctypes.c_void_p(ptr)
else:
# datatable<=0.8.0
from datatable.internal import \
frame_column_data_r # pylint: disable=no-name-in-module
for icol in range(data.ncols):
ptrs[icol] = frame_column_data_r(data, icol)
# always return stypes for dt ingestion
feature_type_strings = (ctypes.c_char_p * data.ncols)()
for icol in range(data.ncols):
feature_type_strings[icol] = ctypes.c_char_p(
data.stypes[icol].name.encode('utf-8'))
_warn_unused_missing(data, missing)
handle = ctypes.c_void_p()
_check_call(_LIB.XGDMatrixCreateFromDT(
ptrs, feature_type_strings,
c_bst_ulong(data.shape[0]),
c_bst_ulong(data.shape[1]),
ctypes.byref(handle),
ctypes.c_int(nthread)))
return handle, feature_names, feature_types
def _is_cudf_df(data):
try:
import cudf
except ImportError:
return False
return hasattr(cudf, 'DataFrame') and isinstance(data, cudf.DataFrame)
def _cudf_array_interfaces(data) -> Tuple[list, bytes]:
"""Extract CuDF __cuda_array_interface__. This is special as it returns a new list of
data and a list of array interfaces. The data is list of categorical codes that
caller can safely ignore, but have to keep their reference alive until usage of array
interface is finished.
"""
from cudf.utils.dtypes import is_categorical_dtype
cat_codes = []
interfaces = []
if _is_cudf_ser(data):
interfaces.append(data.__cuda_array_interface__)
else:
for col in data:
if is_categorical_dtype(data[col].dtype):
codes = data[col].cat.codes
interface = codes.__cuda_array_interface__
cat_codes.append(codes)
else:
interface = data[col].__cuda_array_interface__
if "mask" in interface:
interface["mask"] = interface["mask"].__cuda_array_interface__
interfaces.append(interface)
interfaces_str = bytes(json.dumps(interfaces, indent=2), "utf-8")
return cat_codes, interfaces_str
def _transform_cudf_df(
data,
feature_names: Optional[List[str]],
feature_types: Optional[List[str]],
enable_categorical: bool,
):
from cudf.utils.dtypes import is_categorical_dtype
if feature_names is None:
if _is_cudf_ser(data):
feature_names = [data.name]
elif lazy_isinstance(data.columns, "cudf.core.multiindex", "MultiIndex"):
feature_names = [" ".join([str(x) for x in i]) for i in data.columns]
else:
feature_names = data.columns.format()
if feature_types is None:
feature_types = []
if _is_cudf_ser(data):
dtypes = [data.dtype]
else:
dtypes = data.dtypes
for dtype in dtypes:
if is_categorical_dtype(dtype) and enable_categorical:
feature_types.append(CAT_T)
else:
feature_types.append(_pandas_dtype_mapper[dtype.name])
return data, feature_names, feature_types
def _from_cudf_df(
data,
missing,
nthread,
feature_names: Optional[List[str]],
feature_types: Optional[List[str]],
enable_categorical: bool,
) -> Tuple[ctypes.c_void_p, Any, Any]:
data, feature_names, feature_types = _transform_cudf_df(
data, feature_names, feature_types, enable_categorical
)
_, interfaces_str = _cudf_array_interfaces(data)
handle = ctypes.c_void_p()
config = bytes(json.dumps({"missing": missing, "nthread": nthread}), "utf-8")
_check_call(
_LIB.XGDMatrixCreateFromCudaColumnar(
interfaces_str,
config,
ctypes.byref(handle),
)
)
return handle, feature_names, feature_types
def _is_cudf_ser(data):
try:
import cudf
except ImportError:
return False
return isinstance(data, cudf.Series)
def _is_cupy_array(data):
try:
import cupy
except ImportError:
return False
return isinstance(data, cupy.ndarray)
def _transform_cupy_array(data):
import cupy # pylint: disable=import-error
if not hasattr(data, '__cuda_array_interface__') and hasattr(
data, '__array__'):
data = cupy.array(data, copy=False)
if data.dtype.hasobject or data.dtype in [cupy.float16, cupy.bool_]:
data = data.astype(cupy.float32, copy=False)
return data
def _from_cupy_array(
data,
missing,
nthread,
feature_names: Optional[List[str]],
feature_types: Optional[List[str]],
):
"""Initialize DMatrix from cupy ndarray."""
data = _transform_cupy_array(data)
interface_str = _cuda_array_interface(data)
handle = ctypes.c_void_p()
config = bytes(json.dumps({"missing": missing, "nthread": nthread}), "utf-8")
_check_call(
_LIB.XGDMatrixCreateFromCudaArrayInterface(
interface_str,
config,
ctypes.byref(handle)))
return handle, feature_names, feature_types
def _is_cupy_csr(data):
try:
import cupyx
except ImportError:
return False
return isinstance(data, cupyx.scipy.sparse.csr_matrix)
def _is_cupy_csc(data):
try:
import cupyx
except ImportError:
return False
return isinstance(data, cupyx.scipy.sparse.csc_matrix)
def _is_dlpack(data):
return 'PyCapsule' in str(type(data)) and "dltensor" in str(data)
def _transform_dlpack(data):
from cupy import fromDlpack # pylint: disable=E0401
assert 'used_dltensor' not in str(data)
data = fromDlpack(data)
return data
def _from_dlpack(
data,
missing,
nthread,
feature_names: Optional[List[str]],
feature_types: Optional[List[str]],
):
data = _transform_dlpack(data)
return _from_cupy_array(data, missing, nthread, feature_names,
feature_types)
def _is_uri(data):
return isinstance(data, (str, os.PathLike))
def _from_uri(
data,
missing,
feature_names: Optional[List[str]],
feature_types: Optional[List[str]],
):
_warn_unused_missing(data, missing)
handle = ctypes.c_void_p()
data = os.fspath(os.path.expanduser(data))
_check_call(_LIB.XGDMatrixCreateFromFile(c_str(data),
ctypes.c_int(1),
ctypes.byref(handle)))
return handle, feature_names, feature_types
def _is_list(data):
return isinstance(data, list)
def _from_list(
data,
missing,
n_threads,
feature_names: Optional[List[str]],
feature_types: Optional[List[str]],
):
array = np.array(data)
_check_data_shape(data)
return _from_numpy_array(array, missing, n_threads, feature_names, feature_types)
def _is_tuple(data):
return isinstance(data, tuple)
def _from_tuple(
data,
missing,
n_threads,
feature_names: Optional[List[str]],
feature_types: Optional[List[str]],
):
return _from_list(data, missing, n_threads, feature_names, feature_types)
def _is_iter(data):
return isinstance(data, DataIter)
def _has_array_protocol(data):
return hasattr(data, '__array__')
def _convert_unknown_data(data):
warnings.warn(
f'Unknown data type: {type(data)}, trying to convert it to csr_matrix',
UserWarning
)
try:
import scipy
except ImportError:
return None
try:
data = scipy.sparse.csr_matrix(data)
except Exception: # pylint: disable=broad-except
return None
return data
def dispatch_data_backend(
data,
missing,
threads,
feature_names: Optional[List[str]],
feature_types: Optional[List[str]],
enable_categorical: bool = False,
):
'''Dispatch data for DMatrix.'''
if not _is_cudf_ser(data) and not _is_pandas_series(data):
_check_data_shape(data)
if _is_scipy_csr(data):
return _from_scipy_csr(data, missing, threads, feature_names, feature_types)
if _is_scipy_csc(data):
return _from_scipy_csc(data, missing, feature_names, feature_types)
if _is_scipy_coo(data):
return _from_scipy_csr(
data.tocsr(), missing, threads, feature_names, feature_types
)
if _is_numpy_array(data):
return _from_numpy_array(data, missing, threads, feature_names,
feature_types)
if _is_uri(data):
return _from_uri(data, missing, feature_names, feature_types)
if _is_list(data):
return _from_list(data, missing, threads, feature_names, feature_types)
if _is_tuple(data):
return _from_tuple(data, missing, threads, feature_names, feature_types)
if _is_pandas_df(data):
return _from_pandas_df(data, enable_categorical, missing, threads,
feature_names, feature_types)
if _is_pandas_series(data):
return _from_pandas_series(data, missing, threads, feature_names,
feature_types)
if _is_cudf_df(data) or _is_cudf_ser(data):
return _from_cudf_df(
data, missing, threads, feature_names, feature_types, enable_categorical
)
if _is_cupy_array(data):
return _from_cupy_array(data, missing, threads, feature_names,
feature_types)
if _is_cupy_csr(data):
raise TypeError('cupyx CSR is not supported yet.')
if _is_cupy_csc(data):
raise TypeError('cupyx CSC is not supported yet.')
if _is_dlpack(data):
return _from_dlpack(data, missing, threads, feature_names,
feature_types)
if _is_dt_df(data):
_warn_unused_missing(data, missing)
return _from_dt_df(
data, missing, threads, feature_names, feature_types, enable_categorical
)
if _is_modin_df(data):
return _from_pandas_df(data, enable_categorical, missing, threads,
feature_names, feature_types)
if _is_modin_series(data):
return _from_pandas_series(data, missing, threads, feature_names,
feature_types)
if _has_array_protocol(data):
array = np.asarray(data)
return _from_numpy_array(array, missing, threads, feature_names, feature_types)
converted = _convert_unknown_data(data)
if converted is not None:
return _from_scipy_csr(converted, missing, threads, feature_names, feature_types)
raise TypeError('Not supported type for data.' + str(type(data)))
def _to_data_type(dtype: str, name: str):
dtype_map = {'float32': 1, 'float64': 2, 'uint32': 3, 'uint64': 4}
if dtype not in dtype_map.keys():
raise TypeError(
f'Expecting float32, float64, uint32, uint64, got {dtype} ' +
f'for {name}.')
return dtype_map[dtype]
def _validate_meta_shape(data, name: str) -> None:
if hasattr(data, "shape"):
if len(data.shape) > 2 or (
len(data.shape) == 2 and (data.shape[1] != 0 and data.shape[1] != 1)
):
raise ValueError(f"Invalid shape: {data.shape} for {name}")
def _meta_from_numpy(data, field, dtype, handle):
data = _maybe_np_slice(data, dtype)
interface = data.__array_interface__
assert interface.get('mask', None) is None, 'Masked array is not supported'
size = data.shape[0]
c_type = _to_data_type(str(data.dtype), field)
ptr = interface['data'][0]
ptr = ctypes.c_void_p(ptr)
_check_call(_LIB.XGDMatrixSetDenseInfo(
handle,
c_str(field),
ptr,
c_bst_ulong(size),
c_type
))
def _meta_from_list(data, field, dtype, handle):
data = np.array(data)
_meta_from_numpy(data, field, dtype, handle)
def _meta_from_tuple(data, field, dtype, handle):
return _meta_from_list(data, field, dtype, handle)
def _meta_from_cudf_df(data, field, handle):
if len(data.columns) != 1:
raise ValueError(
'Expecting meta-info to contain a single column')
data = data[data.columns[0]]
interface = bytes(json.dumps([data.__cuda_array_interface__],
indent=2), 'utf-8')
_check_call(_LIB.XGDMatrixSetInfoFromInterface(handle,
c_str(field),
interface))
def _meta_from_cudf_series(data, field, handle):
interface = bytes(json.dumps([data.__cuda_array_interface__],
indent=2), 'utf-8')
_check_call(_LIB.XGDMatrixSetInfoFromInterface(handle,
c_str(field),
interface))
def _meta_from_cupy_array(data, field, handle):
data = _transform_cupy_array(data)
interface = bytes(json.dumps([data.__cuda_array_interface__],
indent=2), 'utf-8')
_check_call(_LIB.XGDMatrixSetInfoFromInterface(handle,
c_str(field),
interface))
def _meta_from_dt(data, field, dtype, handle):
data, _, _ = _transform_dt_df(data, None, None)
_meta_from_numpy(data, field, dtype, handle)
def dispatch_meta_backend(matrix: DMatrix, data, name: str, dtype: str = None):
'''Dispatch for meta info.'''
handle = matrix.handle
_validate_meta_shape(data, name)
if data is None:
return
if _is_list(data):
_meta_from_list(data, name, dtype, handle)
return
if _is_tuple(data):
_meta_from_tuple(data, name, dtype, handle)
return
if _is_numpy_array(data):
_meta_from_numpy(data, name, dtype, handle)
return
if _is_pandas_df(data):
data, _, _ = _transform_pandas_df(data, False, meta=name,
meta_type=dtype)
_meta_from_numpy(data, name, dtype, handle)
return
if _is_pandas_series(data):
data = data.values.astype('float')
assert len(data.shape) == 1 or data.shape[1] == 0 or data.shape[1] == 1
_meta_from_numpy(data, name, dtype, handle)
return
if _is_dlpack(data):
data = _transform_dlpack(data)
_meta_from_cupy_array(data, name, handle)
return
if _is_cupy_array(data):
_meta_from_cupy_array(data, name, handle)
return
if _is_cudf_ser(data):
_meta_from_cudf_series(data, name, handle)
return
if _is_cudf_df(data):
_meta_from_cudf_df(data, name, handle)
return
if _is_dt_df(data):
_meta_from_dt(data, name, dtype, handle)
return
if _is_modin_df(data):
data, _, _ = _transform_pandas_df(
data, False, meta=name, meta_type=dtype)
_meta_from_numpy(data, name, dtype, handle)
return
if _is_modin_series(data):
data = data.values.astype('float')
assert len(data.shape) == 1 or data.shape[1] == 0 or data.shape[1] == 1
_meta_from_numpy(data, name, dtype, handle)
return
if _has_array_protocol(data):
array = np.asarray(data)
_meta_from_numpy(array, name, dtype, handle)
return
raise TypeError('Unsupported type for ' + name, str(type(data)))
class SingleBatchInternalIter(DataIter): # pylint: disable=R0902
'''An iterator for single batch data to help creating device DMatrix.
Transforming input directly to histogram with normal single batch data API
can not access weight for sketching. So this iterator acts as a staging
area for meta info.
'''
def __init__(self, **kwargs: Any):
self.kwargs = kwargs
self.it = 0 # pylint: disable=invalid-name
super().__init__()
def next(self, input_data: Callable) -> int:
if self.it == 1:
return 0
self.it += 1
input_data(**self.kwargs)
return 1
def reset(self) -> None:
self.it = 0
def _proxy_transform(
data,
feature_names: Optional[List[str]],
feature_types: Optional[List[str]],
enable_categorical: bool,
):
if _is_cudf_df(data) or _is_cudf_ser(data):
return _transform_cudf_df(
data, feature_names, feature_types, enable_categorical
)
if _is_cupy_array(data):
data = _transform_cupy_array(data)
return data, feature_names, feature_types
if _is_dlpack(data):
return _transform_dlpack(data), feature_names, feature_types
if _is_numpy_array(data):
return data, feature_names, feature_types
if _is_scipy_csr(data):
return data, feature_names, feature_types
if _is_pandas_df(data):
arr, feature_names, feature_types = _transform_pandas_df(
data, enable_categorical, feature_names, feature_types
)
return arr, feature_names, feature_types
raise TypeError("Value type is not supported for data iterator:" + str(type(data)))
def dispatch_proxy_set_data(proxy: _ProxyDMatrix, data: Any, allow_host: bool) -> None:
"""Dispatch for DeviceQuantileDMatrix."""
if not _is_cudf_ser(data) and not _is_pandas_series(data):
_check_data_shape(data)
if _is_cudf_df(data):
proxy._set_data_from_cuda_columnar(data) # pylint: disable=W0212
return
if _is_cudf_ser(data):
proxy._set_data_from_cuda_columnar(data) # pylint: disable=W0212
return
if _is_cupy_array(data):
proxy._set_data_from_cuda_interface(data) # pylint: disable=W0212
return
if _is_dlpack(data):
data = _transform_dlpack(data)
proxy._set_data_from_cuda_interface(data) # pylint: disable=W0212
return
err = TypeError("Value type is not supported for data iterator:" + str(type(data)))
if not allow_host:
raise err
if _is_numpy_array(data):
proxy._set_data_from_array(data) # pylint: disable=W0212
return
if _is_scipy_csr(data):
proxy._set_data_from_csr(data) # pylint: disable=W0212
return
raise err