-
Notifications
You must be signed in to change notification settings - Fork 195
/
builder.rs
502 lines (443 loc) · 17.5 KB
/
builder.rs
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
// Copyright 2022 CeresDB Project Authors. Licensed under Apache-2.0.
//! Sst builder implementation based on parquet.
use std::{
collections::VecDeque,
sync::{
atomic::{AtomicUsize, Ordering},
Arc,
},
};
use async_trait::async_trait;
use common_types::{record_batch::RecordBatchWithKey, request_id::RequestId};
use datafusion::parquet::basic::Compression;
use ethbloom::{Bloom, Input};
use futures::StreamExt;
use log::debug;
use object_store::{ObjectStoreRef, Path};
use snafu::ResultExt;
use crate::sst::{
builder::{RecordBatchStream, SstBuilder, *},
factory::SstBuilderOptions,
file::{BloomFilter, SstMetaData},
parquet::encoding::ParquetEncoder,
};
/// The implementation of sst based on parquet and object storage.
#[derive(Debug)]
pub struct ParquetSstBuilder<'a> {
/// The path where the data is persisted.
path: &'a Path,
/// The storage where the data is persist.
storage: &'a ObjectStoreRef,
/// Max row group size.
num_rows_per_row_group: usize,
compression: Compression,
}
impl<'a> ParquetSstBuilder<'a> {
pub fn new(path: &'a Path, storage: &'a ObjectStoreRef, options: &SstBuilderOptions) -> Self {
Self {
path,
storage,
num_rows_per_row_group: options.num_rows_per_row_group,
compression: options.compression.into(),
}
}
}
/// RecordBytesReader provides AsyncRead implementation for the encoded records
/// by parquet.
struct RecordBytesReader {
request_id: RequestId,
record_stream: RecordBatchStream,
num_rows_per_row_group: usize,
compression: Compression,
meta_data: SstMetaData,
total_row_num: Arc<AtomicUsize>,
// Record batch partitioned by exactly given `num_rows_per_row_group`
// There may be more than one `RecordBatchWithKey` inside each partition
partitioned_record_batch: Vec<Vec<RecordBatchWithKey>>,
}
impl RecordBytesReader {
// Partition record batch stream into batch vector with exactly given
// `num_rows_per_row_group`
async fn partition_record_batch(&mut self) -> Result<()> {
let mut fetched_row_num = 0;
let mut pending_record_batch: VecDeque<RecordBatchWithKey> = Default::default();
let mut current_batch = Vec::new();
let mut remaining = self.num_rows_per_row_group; // how many records are left for current_batch
while let Some(record_batch) = self.record_stream.next().await {
let record_batch = record_batch.context(PollRecordBatch)?;
debug_assert!(
!record_batch.is_empty(),
"found empty record batch, request id:{}",
self.request_id
);
fetched_row_num += record_batch.num_rows();
pending_record_batch.push_back(record_batch);
// reach batch limit, append to self and reset counter and pending batch
// Note: pending_record_batch may contains multiple batches
while fetched_row_num >= self.num_rows_per_row_group {
match pending_record_batch.pop_front() {
// accumulated records is enough for one batch
Some(next) if next.num_rows() >= remaining => {
current_batch.push(next.slice(0, remaining));
pending_record_batch
.push_front(next.slice(remaining, next.num_rows() - remaining));
self.partitioned_record_batch
.push(std::mem::take(&mut current_batch));
fetched_row_num -= remaining;
remaining = self.num_rows_per_row_group;
}
// not enough for one batch
Some(next) => {
remaining -= next.num_rows();
fetched_row_num -= next.num_rows();
current_batch.push(next);
}
// nothing left, put back to pending_record_batch
_ => {
for records in std::mem::take(&mut current_batch) {
fetched_row_num += records.num_rows();
pending_record_batch.push_front(records);
}
break;
}
}
}
}
// collect remaining records into one batch
let mut remaining = Vec::with_capacity(pending_record_batch.len());
while let Some(batch) = pending_record_batch.pop_front() {
remaining.push(batch);
}
if !remaining.is_empty() {
self.partitioned_record_batch.push(remaining);
}
Ok(())
}
fn build_bloom_filter(&self) -> BloomFilter {
let filters = self
.partitioned_record_batch
.iter()
.map(|row_group_batch| {
let mut row_group_filters =
vec![Bloom::default(); row_group_batch[0].num_columns()];
for partial_batch in row_group_batch {
for (col_idx, column) in partial_batch.columns().iter().enumerate() {
for row in 0..column.num_rows() {
let datum = column.datum(row);
let bytes = datum.to_bytes();
row_group_filters[col_idx].accrue(Input::Raw(&bytes));
}
}
}
row_group_filters
})
.collect::<Vec<_>>();
BloomFilter::new(filters)
}
async fn read_all(mut self) -> Result<Vec<u8>> {
self.partition_record_batch().await?;
let filters = self.build_bloom_filter();
self.meta_data.bloom_filter = filters;
let mut parquet_encoder = ParquetEncoder::try_new(
self.num_rows_per_row_group,
self.compression,
self.meta_data,
)
.map_err(|e| Box::new(e) as _)
.context(EncodeRecordBatch)?;
// process record batch stream
let mut arrow_record_batch_vec = Vec::new();
for record_batches in self.partitioned_record_batch {
for batch in record_batches {
arrow_record_batch_vec.push(batch.into_record_batch().into_arrow_record_batch());
}
let buf_len = arrow_record_batch_vec.len();
let row_num = parquet_encoder
.encode_record_batch(arrow_record_batch_vec)
.map_err(|e| Box::new(e) as _)
.context(EncodeRecordBatch)?;
self.total_row_num.fetch_add(row_num, Ordering::Relaxed);
arrow_record_batch_vec = Vec::with_capacity(buf_len);
}
let bytes = parquet_encoder
.close()
.map_err(|e| Box::new(e) as _)
.context(EncodeRecordBatch)?;
Ok(bytes)
}
}
#[async_trait]
impl<'a> SstBuilder for ParquetSstBuilder<'a> {
async fn build(
&mut self,
request_id: RequestId,
meta: &SstMetaData,
record_stream: RecordBatchStream,
) -> Result<SstInfo> {
debug!(
"Build parquet file, request_id:{}, meta:{:?}, num_rows_per_row_group:{}",
request_id, meta, self.num_rows_per_row_group
);
let total_row_num = Arc::new(AtomicUsize::new(0));
let reader = RecordBytesReader {
request_id,
record_stream,
num_rows_per_row_group: self.num_rows_per_row_group,
compression: self.compression,
total_row_num: total_row_num.clone(),
// TODO(xikai): should we avoid this clone?
meta_data: meta.to_owned(),
partitioned_record_batch: Default::default(),
};
let bytes = reader.read_all().await?;
self.storage
.put(self.path, bytes.into())
.await
.context(Storage)?;
let file_head = self.storage.head(self.path).await.context(Storage)?;
Ok(SstInfo {
file_size: file_head.size,
row_num: total_row_num.load(Ordering::Relaxed),
})
}
}
#[cfg(test)]
mod tests {
use std::task::Poll;
use common_types::{
bytes::Bytes,
projected_schema::ProjectedSchema,
tests::{build_row, build_schema},
time::{TimeRange, Timestamp},
};
use common_util::{
runtime::{self, Runtime},
tests::init_log_for_test,
};
use futures::stream;
use object_store::LocalFileSystem;
use table_engine::predicate::Predicate;
use tempfile::tempdir;
use super::*;
use crate::{
row_iter::tests::build_record_batch_with_key,
sst::{
factory::{Factory, FactoryImpl, SstBuilderOptions, SstReaderOptions, SstType},
parquet::{reader::ParquetSstReader, AsyncParquetReader},
reader::{tests::check_stream, SstReader},
},
table_options,
};
// TODO(xikai): add test for reverse reader
#[test]
fn test_parquet_build_and_read() {
let runtime = Arc::new(runtime::Builder::default().build().unwrap());
parquet_write_and_then_read_back(runtime.clone(), 3, vec![3, 3, 3, 3, 3]);
parquet_write_and_then_read_back(runtime.clone(), 4, vec![4, 4, 4, 3]);
parquet_write_and_then_read_back(runtime, 5, vec![5, 5, 5]);
}
fn parquet_write_and_then_read_back(
runtime: Arc<Runtime>,
num_rows_per_row_group: usize,
expected_num_rows: Vec<i64>,
) {
parquet_write_and_then_read_back_inner(
runtime.clone(),
num_rows_per_row_group,
expected_num_rows.clone(),
false,
);
parquet_write_and_then_read_back_inner(
runtime,
num_rows_per_row_group,
expected_num_rows,
true,
);
}
fn parquet_write_and_then_read_back_inner(
runtime: Arc<Runtime>,
num_rows_per_row_group: usize,
expected_num_rows: Vec<i64>,
async_reader: bool,
) {
runtime.block_on(async {
let sst_factory = FactoryImpl;
let sst_builder_options = SstBuilderOptions {
sst_type: SstType::Parquet,
num_rows_per_row_group,
compression: table_options::Compression::Uncompressed,
};
let dir = tempdir().unwrap();
let root = dir.path();
let store = Arc::new(LocalFileSystem::new_with_prefix(root).unwrap()) as _;
let sst_file_path = Path::from("data.par");
let schema = build_schema();
let projected_schema = ProjectedSchema::no_projection(schema.clone());
let sst_meta = SstMetaData {
min_key: Bytes::from_static(b"100"),
max_key: Bytes::from_static(b"200"),
time_range: TimeRange::new_unchecked(Timestamp::new(1), Timestamp::new(2)),
max_sequence: 200,
schema: schema.clone(),
size: 10,
row_num: 2,
storage_format_opts: Default::default(),
bloom_filter: Default::default(),
};
let mut counter = 10;
let record_batch_stream = Box::new(stream::poll_fn(move |ctx| -> Poll<Option<_>> {
counter -= 1;
if counter == 0 {
return Poll::Ready(None);
} else if counter % 2 == 0 {
ctx.waker().wake_by_ref();
return Poll::Pending;
}
// reach here when counter is 9 7 5 3 1
let ts = 100 + counter;
let rows = vec![
build_row(b"a", ts, 10.0, "v4"),
build_row(b"b", ts, 10.0, "v4"),
build_row(b"c", ts, 10.0, "v4"),
];
let batch = build_record_batch_with_key(schema.clone(), rows);
Poll::Ready(Some(Ok(batch)))
}));
let mut builder = sst_factory
.new_sst_builder(&sst_builder_options, &sst_file_path, &store)
.unwrap();
let sst_info = builder
.build(RequestId::next_id(), &sst_meta, record_batch_stream)
.await
.unwrap();
assert_eq!(15, sst_info.row_num);
// read sst back to test
let sst_reader_options = SstReaderOptions {
sst_type: SstType::Parquet,
read_batch_row_num: 5,
reverse: false,
projected_schema,
predicate: Arc::new(Predicate::empty()),
meta_cache: None,
data_cache: None,
runtime: runtime.clone(),
};
let mut reader: Box<dyn SstReader + Send> = if async_reader {
let mut reader =
AsyncParquetReader::new(&sst_file_path, &store, &sst_reader_options);
let mut sst_meta_readback = {
// FIXME: size of SstMetaData is not what this file's size, so overwrite it
// https://github.com/CeresDB/ceresdb/issues/321
let mut meta = reader.meta_data().await.unwrap().clone();
meta.size = sst_meta.size;
meta
};
// bloom filter is built insider sst writer, so overwrite to default for
// comparsion
sst_meta_readback.bloom_filter = Default::default();
assert_eq!(&sst_meta_readback, &sst_meta);
assert_eq!(
expected_num_rows,
reader
.row_groups()
.await
.iter()
.map(|g| g.num_rows())
.collect::<Vec<_>>()
);
Box::new(reader)
} else {
let mut reader = ParquetSstReader::new(&sst_file_path, &store, &sst_reader_options);
let sst_meta_readback = {
let mut meta = reader.meta_data().await.unwrap().clone();
// bloom filter is built insider sst writer, so overwrite to default for
// comparsion
meta.bloom_filter = Default::default();
meta
};
assert_eq!(&sst_meta_readback, &sst_meta);
assert_eq!(
expected_num_rows,
reader
.row_groups()
.await
.iter()
.map(|g| g.num_rows())
.collect::<Vec<_>>()
);
Box::new(reader)
};
let mut stream = reader.read().await.unwrap();
let mut expect_rows = vec![];
for counter in &[9, 7, 5, 3, 1] {
expect_rows.push(build_row(b"a", 100 + counter, 10.0, "v4"));
expect_rows.push(build_row(b"b", 100 + counter, 10.0, "v4"));
expect_rows.push(build_row(b"c", 100 + counter, 10.0, "v4"));
}
check_stream(&mut stream, expect_rows).await;
});
}
#[tokio::test]
async fn test_partition_record_batch() {
// row group size: 10
let testcases = vec![
// input, expected
(vec![10, 10], vec![10, 10]),
(vec![10, 10, 1], vec![10, 10, 1]),
(vec![10, 10, 21], vec![10, 10, 10, 10, 1]),
(vec![5, 6, 10], vec![10, 10, 1]),
(vec![5, 4, 4, 30], vec![10, 10, 10, 10, 3]),
];
for (input, expected) in testcases {
test_partition_record_batch_inner(input, expected).await;
}
}
async fn test_partition_record_batch_inner(
input_row_nums: Vec<usize>,
expected_row_nums: Vec<usize>,
) {
init_log_for_test();
let schema = build_schema();
let mut poll_cnt = 0;
let schema_clone = schema.clone();
let record_batch_stream = Box::new(stream::poll_fn(move |_ctx| -> Poll<Option<_>> {
if poll_cnt == input_row_nums.len() {
return Poll::Ready(None);
}
let rows = (0..input_row_nums[poll_cnt])
.map(|_| build_row(b"a", 100, 10.0, "v4"))
.collect::<Vec<_>>();
let batch = build_record_batch_with_key(schema_clone.clone(), rows);
let ret = Poll::Ready(Some(Ok(batch)));
poll_cnt += 1;
ret
}));
let mut reader = RecordBytesReader {
request_id: RequestId::next_id(),
record_stream: record_batch_stream,
num_rows_per_row_group: 10,
compression: Compression::UNCOMPRESSED,
meta_data: SstMetaData {
min_key: Default::default(),
max_key: Default::default(),
time_range: Default::default(),
max_sequence: 1,
schema,
size: 0,
row_num: 0,
storage_format_opts: Default::default(),
bloom_filter: Default::default(),
},
total_row_num: Arc::new(AtomicUsize::new(0)),
partitioned_record_batch: Vec::new(),
};
reader.partition_record_batch().await.unwrap();
for (i, expected_row_num) in expected_row_nums.into_iter().enumerate() {
let actual: usize = reader.partitioned_record_batch[i]
.iter()
.map(|b| b.num_rows())
.sum();
assert_eq!(expected_row_num, actual);
}
}
}