Don't run apt-get commands from the whole repo test suite #2032
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The recent changes to how we install shellcheck in #2026 mean that the whole repo tests can only be run as root (and attempt to install things globally), which isn't ideal in general and prevents local usage. This PR changes it so that the build will still use the old method to install shellcheck if it's not found, but will use a system one if present, and updates our build config to install shellcheck before the tests are run.