From afe87190ac16ab640682910102c96ca9ff7fc9da Mon Sep 17 00:00:00 2001 From: Wei Ji <23487320+weiji14@users.noreply.github.com> Date: Sat, 31 Jul 2021 14:47:51 +1200 Subject: [PATCH 1/5] Temporarily viewing verbose output from pip install step --- .github/workflows/ci_tests_dev.yaml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/.github/workflows/ci_tests_dev.yaml b/.github/workflows/ci_tests_dev.yaml index 937696b77f8..c544b42193c 100644 --- a/.github/workflows/ci_tests_dev.yaml +++ b/.github/workflows/ci_tests_dev.yaml @@ -6,7 +6,7 @@ on: # push: # branches: [ master ] pull_request: - types: [ready_for_review] + types: [synchronize, ready_for_review] paths-ignore: - 'doc/**' - 'examples/**' @@ -85,7 +85,7 @@ jobs: run: | conda install ninja cmake libblas libcblas liblapack fftw gdal geopandas \ ghostscript libnetcdf hdf5 zlib curl pcre make dvc - pip install --pre numpy pandas xarray netCDF4 packaging \ + pip install --verbose --pre numpy pandas xarray netCDF4 packaging \ ipython pytest-cov pytest-mpl pytest>=6.0 sphinx-gallery # Build and install latest GMT from GitHub From 0a8ab3d99ed784fa39e1b1198edbe2326efa23cf Mon Sep 17 00:00:00 2001 From: Wei Ji <23487320+weiji14@users.noreply.github.com> Date: Sat, 31 Jul 2021 15:03:01 +1200 Subject: [PATCH 2/5] List installed dependencies from conda and pip --- .github/workflows/ci_tests_dev.yaml | 2 ++ 1 file changed, 2 insertions(+) diff --git a/.github/workflows/ci_tests_dev.yaml b/.github/workflows/ci_tests_dev.yaml index c544b42193c..a36ffbc3ee1 100644 --- a/.github/workflows/ci_tests_dev.yaml +++ b/.github/workflows/ci_tests_dev.yaml @@ -87,6 +87,8 @@ jobs: ghostscript libnetcdf hdf5 zlib curl pcre make dvc pip install --verbose --pre numpy pandas xarray netCDF4 packaging \ ipython pytest-cov pytest-mpl pytest>=6.0 sphinx-gallery + conda list + pip list # Build and install latest GMT from GitHub - name: Install GMT ${{ matrix.gmt_git_ref }} branch (Linux/macOS) From 81c3afae6a4d33f7bf33a6f42c2beb8287787447 Mon Sep 17 00:00:00 2001 From: Wei Ji <23487320+weiji14@users.noreply.github.com> Date: Sat, 31 Jul 2021 15:14:14 +1200 Subject: [PATCH 3/5] Install toml in ci_tests_dev.yaml --- .github/workflows/ci_tests_dev.yaml | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/.github/workflows/ci_tests_dev.yaml b/.github/workflows/ci_tests_dev.yaml index a36ffbc3ee1..c806a3eb8f8 100644 --- a/.github/workflows/ci_tests_dev.yaml +++ b/.github/workflows/ci_tests_dev.yaml @@ -86,7 +86,8 @@ jobs: conda install ninja cmake libblas libcblas liblapack fftw gdal geopandas \ ghostscript libnetcdf hdf5 zlib curl pcre make dvc pip install --verbose --pre numpy pandas xarray netCDF4 packaging \ - ipython pytest-cov pytest-mpl pytest>=6.0 sphinx-gallery + ipython pytest-cov pytest-mpl pytest>=6.0 sphinx-gallery \ + toml conda list pip list From e6f6ed2024e65c8f68ca89348f243ded1620c274 Mon Sep 17 00:00:00 2001 From: Wei Ji <23487320+weiji14@users.noreply.github.com> Date: Sat, 31 Jul 2021 15:26:33 +1200 Subject: [PATCH 4/5] Install tomli as dependency in ci_tests_dev.yaml Need to use tomli instead of toml. --- .github/workflows/ci_tests_dev.yaml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/ci_tests_dev.yaml b/.github/workflows/ci_tests_dev.yaml index c806a3eb8f8..f3ee2eced6d 100644 --- a/.github/workflows/ci_tests_dev.yaml +++ b/.github/workflows/ci_tests_dev.yaml @@ -87,7 +87,7 @@ jobs: ghostscript libnetcdf hdf5 zlib curl pcre make dvc pip install --verbose --pre numpy pandas xarray netCDF4 packaging \ ipython pytest-cov pytest-mpl pytest>=6.0 sphinx-gallery \ - toml + tomli conda list pip list From ad1440b97a64f49208468d0dadf7618742cc9364 Mon Sep 17 00:00:00 2001 From: Wei Ji <23487320+weiji14@users.noreply.github.com> Date: Thu, 5 Aug 2021 12:21:06 +1200 Subject: [PATCH 5/5] Revert verbose output printing --- .github/workflows/ci_tests_dev.yaml | 6 ++---- 1 file changed, 2 insertions(+), 4 deletions(-) diff --git a/.github/workflows/ci_tests_dev.yaml b/.github/workflows/ci_tests_dev.yaml index 254849d6669..6f73079db40 100644 --- a/.github/workflows/ci_tests_dev.yaml +++ b/.github/workflows/ci_tests_dev.yaml @@ -6,7 +6,7 @@ on: # push: # branches: [ main ] pull_request: - types: [synchronize, ready_for_review] + types: [ready_for_review] paths-ignore: - 'doc/**' - 'examples/**' @@ -85,11 +85,9 @@ jobs: run: | conda install ninja cmake libblas libcblas liblapack fftw gdal geopandas \ ghostscript libnetcdf hdf5 zlib curl pcre make dvc - pip install --verbose --pre numpy pandas xarray netCDF4 packaging \ + pip install --pre numpy pandas xarray netCDF4 packaging \ ipython pytest-cov pytest-mpl pytest>=6.0 sphinx-gallery \ tomli - conda list - pip list # Build and install latest GMT from GitHub - name: Install GMT ${{ matrix.gmt_git_ref }} branch (Linux/macOS)